RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 ORMDL3Q8N138 153 aa11.6□□□□□ -0.55
VARS2-211ENST00000541562 MGPP08493 103 aa11.6□□□□□ -0.55
VARS2-211ENST00000541562 SPANXN1Q5VSR9 72 aa11.59□□□□□ -0.55
VARS2-211ENST00000541562 ZNF747Q9BV97 191 aa11.59□□□□□ -0.55
VARS2-211ENST00000541562 TMEM160Q9NX00 188 aa11.59□□□□□ -0.55
VARS2-211ENST00000541562 TMEM14CQ9P0S9 112 aa11.59□□□□□ -0.55
VARS2-211ENST00000541562 H3BUX3 64 aa11.59□□□□□ -0.55
VARS2-211ENST00000541562 EFNA4P52798 201 aa11.59□□□□□ -0.55
VARS2-211ENST00000541562 CENPVL3A0A0U1RRI6 287 aa11.59□□□□□ -0.55
VARS2-211ENST00000541562 ODF3BA8MYP8 253 aa11.59□□□□□ -0.55
VARS2-211ENST00000541562 NDUFA3O95167 84 aa11.59□□□□□ -0.55
VARS2-211ENST00000541562 GOSR1O95249 250 aa11.59□□□□□ -0.55
VARS2-211ENST00000541562 C11orf71Q6IPW1 123 aa11.59□□□□□ -0.55
VARS2-211ENST00000541562 GTSCR1Q86UQ5 136 aa11.59□□□□□ -0.55
VARS2-211ENST00000541562 LINC00477Q96M19 166 aa11.59□□□□□ -0.55
VARS2-211ENST00000541562 SMAD7O15105 426 aaKnown RBP11.58□□□□□ -0.56
VARS2-211ENST00000541562 HIST1H1AQ02539 215 aaPredicted RBP11.58□□□□□ -0.56
VARS2-211ENST00000541562 FAM104BQ5XKR9 115 aa11.58□□□□□ -0.56
VARS2-211ENST00000541562 HSPB8Q9UJY1 196 aa11.58□□□□□ -0.56
VARS2-211ENST00000541562 S100A4P26447 101 aaKnown RBP11.58□□□□□ -0.56
VARS2-211ENST00000541562 NDFIP1Q9BT67 221 aa11.58□□□□□ -0.56
VARS2-211ENST00000541562 A0A096LNJ9 63 aa11.58□□□□□ -0.56
VARS2-211ENST00000541562 NPFFO15130 113 aa11.58□□□□□ -0.56
VARS2-211ENST00000541562 IGHV4-39P01824 125 aa11.58□□□□□ -0.56
VARS2-211ENST00000541562 MTURNQ8N3F0 131 aa11.58□□□□□ -0.56
VARS2-211ENST00000541562 NPBQ8NG41 125 aa11.58□□□□□ -0.56
VARS2-211ENST00000541562 TRAV8-6A0A0B4J262 113 aa11.57□□□□□ -0.56
VARS2-211ENST00000541562 ATP5J2P56134 94 aa11.57□□□□□ -0.56
VARS2-211ENST00000541562 RASL11AQ6T310 242 aa11.57□□□□□ -0.56
VARS2-211ENST00000541562 FOXC2Q99958 501 aa11.57□□□□□ -0.56
VARS2-211ENST00000541562 NPIPB6E9PJ23 425 aa11.57□□□□□ -0.56
VARS2-211ENST00000541562 RNASE4P34096 147 aaKnown RBP11.57□□□□□ -0.56
VARS2-211ENST00000541562 TMEM78Q5T7P6 136 aa11.57□□□□□ -0.56
VARS2-211ENST00000541562 TTC9CQ8N5M4 171 aa11.57□□□□□ -0.56
VARS2-211ENST00000541562 SIRPDQ9H106 197 aa11.57□□□□□ -0.56
VARS2-211ENST00000541562 PRR9Q5T870 116 aa11.56□□□□□ -0.56
VARS2-211ENST00000541562 TRAV30A0A087WSZ9 112 aa11.56□□□□□ -0.56
VARS2-211ENST00000541562 IGHV2-70DA0A0C4DH43 119 aa11.56□□□□□ -0.56
VARS2-211ENST00000541562 M0R1W7 72 aa11.56□□□□□ -0.56
VARS2-211ENST00000541562 OVOL3O00110 214 aa11.56□□□□□ -0.56
VARS2-211ENST00000541562 LMO4P61968 165 aa11.56□□□□□ -0.56
VARS2-211ENST00000541562 C8orf86Q6ZUL3 223 aa11.56□□□□□ -0.56
VARS2-211ENST00000541562 CHCHD1Q96BP2 118 aaKnown RBP11.56□□□□□ -0.56
VARS2-211ENST00000541562 COX11Q9Y6N1 276 aa11.56□□□□□ -0.56
VARS2-211ENST00000541562 FABP5P3A8MUU1 101 aa11.56□□□□□ -0.56
VARS2-211ENST00000541562 BUB3O43684 328 aa11.56□□□□□ -0.56
VARS2-211ENST00000541562 ZC2HC1BQ5TFG8 222 aa11.56□□□□□ -0.56
VARS2-211ENST00000541562 C14orf178Q8N769 122 aaPredicted RBP11.56□□□□□ -0.56
VARS2-211ENST00000541562 IGKV3D-20A0A0C4DH25 116 aa11.55□□□□□ -0.56
VARS2-211ENST00000541562 PSG9Q00887 426 aa11.55□□□□□ -0.56
VARS2-211ENST00000541562 ATP5G2Q06055 141 aa11.55□□□□□ -0.56
VARS2-211ENST00000541562 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.55□□□□□ -0.56
VARS2-211ENST00000541562 TMEM158Q8WZ71 300 aa11.55□□□□□ -0.56
VARS2-211ENST00000541562 C20orf173Q96LM9 149 aa11.55□□□□□ -0.56
VARS2-211ENST00000541562 METTL26Q96S19 204 aa11.55□□□□□ -0.56
VARS2-211ENST00000541562 GNRH2O43555 120 aa11.55□□□□□ -0.56
VARS2-211ENST00000541562 GCSHP23434 173 aa11.55□□□□□ -0.56
VARS2-211ENST00000541562 ARL3P36405 182 aa11.55□□□□□ -0.56
VARS2-211ENST00000541562 OR2K2Q8NGT1 345 aa11.55□□□□□ -0.56
VARS2-211ENST00000541562 IFI27L1Q96BM0 104 aa11.55□□□□□ -0.56
VARS2-211ENST00000541562 HIVEP2P31629 2446 aa11.55□□□□□ -0.56
VARS2-211ENST00000541562 PRM2P04554 102 aa11.54□□□□□ -0.56
VARS2-211ENST00000541562 BVES-AS1Q5T3Y7 98 aa11.54□□□□□ -0.56
VARS2-211ENST00000541562 DTX2Q86UW9 622 aa11.54□□□□□ -0.56
VARS2-211ENST00000541562 JPT2Q9H910 190 aa11.54□□□□□ -0.56
VARS2-211ENST00000541562 K7ERJ3 54 aa11.54□□□□□ -0.56
VARS2-211ENST00000541562 ZNF502Q8TBZ5 544 aa11.54□□□□□ -0.56
VARS2-211ENST00000541562 USP24Q9UPU5 2620 aa11.54□□□□□ -0.56
VARS2-211ENST00000541562 IGHV4-30-2A0A087WSY4 118 aa11.54□□□□□ -0.56
VARS2-211ENST00000541562 H3BUT2 72 aa11.54□□□□□ -0.56
VARS2-211ENST00000541562 FAM74A4Q5TZK3 123 aa11.54□□□□□ -0.56
VARS2-211ENST00000541562 TNFRSF6BO95407 300 aa11.53□□□□□ -0.56
VARS2-211ENST00000541562 CT83Q5H943 113 aa11.53□□□□□ -0.56
VARS2-211ENST00000541562 C11orf44Q8N8P7 122 aa11.53□□□□□ -0.56
VARS2-211ENST00000541562 GFRA4Q9GZZ7 299 aa11.53□□□□□ -0.56
VARS2-211ENST00000541562 IGKV2D-26A0A0A0MRZ7 120 aa11.53□□□□□ -0.56
VARS2-211ENST00000541562 TRAV41A0A0B4J266 112 aa11.53□□□□□ -0.56
VARS2-211ENST00000541562 TRAV12-2A0A075B6T6 113 aa11.53□□□□□ -0.56
VARS2-211ENST00000541562 CLPSL1A2RUU4 121 aa11.53□□□□□ -0.56
VARS2-211ENST00000541562 SAPCD1Q5SSQ6 148 aa11.53□□□□□ -0.56
VARS2-211ENST00000541562 NBEAL2Q6ZNJ1 2754 aa11.52□□□□□ -0.56
VARS2-211ENST00000541562 ITLN2Q8WWU7 325 aaPredicted RBP11.52□□□□□ -0.56
VARS2-211ENST00000541562 DUX3Q96PT4 197 aa11.52□□□□□ -0.56
VARS2-211ENST00000541562 AVPP01185 164 aa11.52□□□□□ -0.57
VARS2-211ENST00000541562 PAX8Q06710 450 aa11.52□□□□□ -0.57
VARS2-211ENST00000541562 RPL39LQ96EH5 51 aaKnown RBP11.52□□□□□ -0.57
VARS2-211ENST00000541562 RNF5Q99942 180 aa11.52□□□□□ -0.57
VARS2-211ENST00000541562 UBE2E1P51965 193 aa11.52□□□□□ -0.57
VARS2-211ENST00000541562 SCRT2Q9NQ03 307 aa11.52□□□□□ -0.57
VARS2-211ENST00000541562 FLNAP21333 2647 aaKnown RBP11.51□□□□□ -0.57
VARS2-211ENST00000541562 BMI1P35226 326 aa11.51□□□□□ -0.57
VARS2-211ENST00000541562 EEF1AKMT3Q96AZ1 226 aa11.51□□□□□ -0.57
VARS2-211ENST00000541562 AJUBAQ96IF1 538 aa11.51□□□□□ -0.57
VARS2-211ENST00000541562 A0A087WWL8 130 aa11.51□□□□□ -0.57
VARS2-211ENST00000541562 F5H697 171 aa11.51□□□□□ -0.57
VARS2-211ENST00000541562 TAX1BP3O14907 124 aa11.51□□□□□ -0.57
VARS2-211ENST00000541562 HBDP02042 147 aa11.51□□□□□ -0.57
VARS2-211ENST00000541562 FOSL1P15407 271 aa11.51□□□□□ -0.57
VARS2-211ENST00000541562 KHDC1LQ5JSQ8 128 aa11.51□□□□□ -0.57
VARS2-211ENST00000541562 ZFAND3Q9H8U3 227 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms