RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 A0A0G2JNJ9 132 aa11.87□□□□□ -0.51
SMARCA4-207ENST00000541122 NDUFA4O00483 81 aa11.87□□□□□ -0.51
SMARCA4-207ENST00000541122 RPL32P62910 135 aaKnown RBP11.87□□□□□ -0.51
SMARCA4-207ENST00000541122 ZNF491Q8N8L2 437 aa11.87□□□□□ -0.51
SMARCA4-207ENST00000541122 Q9UFV3 132 aa11.87□□□□□ -0.51
SMARCA4-207ENST00000541122 OVOL3O00110 214 aa11.87□□□□□ -0.51
SMARCA4-207ENST00000541122 IGLV1-44P01699 117 aa11.87□□□□□ -0.51
SMARCA4-207ENST00000541122 LOXP28300 417 aaPredicted RBP11.87□□□□□ -0.51
SMARCA4-207ENST00000541122 ATP6V0E2Q8NHE4 81 aa11.87□□□□□ -0.51
SMARCA4-207ENST00000541122 ATP6V0E1O15342 81 aa11.86□□□□□ -0.51
SMARCA4-207ENST00000541122 PRDM6Q9NQX0 595 aa11.86□□□□□ -0.51
SMARCA4-207ENST00000541122 ZNF503-AS2A6NEH8 195 aa11.86□□□□□ -0.51
SMARCA4-207ENST00000541122 UBE2E1P51965 193 aa11.86□□□□□ -0.51
SMARCA4-207ENST00000541122 KRTAP27-1Q3LI81 207 aa11.86□□□□□ -0.51
SMARCA4-207ENST00000541122 PI4KAP42356 2102 aa11.86□□□□□ -0.51
SMARCA4-207ENST00000541122 HERVK_113P63121 156 aa11.86□□□□□ -0.51
SMARCA4-207ENST00000541122 A0A1W2PRX2 142 aa11.85□□□□□ -0.51
SMARCA4-207ENST00000541122 COL8A2P25067 703 aa11.85□□□□□ -0.51
SMARCA4-207ENST00000541122 PRSS47A8MTI9 375 aa11.85□□□□□ -0.51
SMARCA4-207ENST00000541122 PIP4P2Q8N4L2 257 aa11.85□□□□□ -0.51
SMARCA4-207ENST00000541122 C11orf1Q9H5F2 150 aa11.85□□□□□ -0.51
SMARCA4-207ENST00000541122 FNDC1Q4ZHG4 1894 aaPredicted RBP11.85□□□□□ -0.51
SMARCA4-207ENST00000541122 EGR2P11161 476 aaPredicted RBP11.85□□□□□ -0.51
SMARCA4-207ENST00000541122 IGLV3-9A0A075B6K5 115 aa11.84□□□□□ -0.51
SMARCA4-207ENST00000541122 SAA4P35542 130 aa11.84□□□□□ -0.51
SMARCA4-207ENST00000541122 LINC00173Q6ZV60 143 aa11.84□□□□□ -0.51
SMARCA4-207ENST00000541122 F8WEM9 126 aa11.84□□□□□ -0.51
SMARCA4-207ENST00000541122 TPSG1Q9NRR2 321 aa11.84□□□□□ -0.51
SMARCA4-207ENST00000541122 GP9P14770 177 aa11.84□□□□□ -0.51
SMARCA4-207ENST00000541122 Q6ZS92 163 aa11.84□□□□□ -0.51
SMARCA4-207ENST00000541122 CRYBA4P53673 196 aa11.83□□□□□ -0.51
SMARCA4-207ENST00000541122 ASPHD1Q5U4P2 390 aa11.83□□□□□ -0.52
SMARCA4-207ENST00000541122 CEP250Q9BV73 2442 aa11.83□□□□□ -0.52
SMARCA4-207ENST00000541122 DOCK9Q9BZ29 2069 aa11.83□□□□□ -0.52
SMARCA4-207ENST00000541122 TRAV12-1A0A0B4J245 112 aa11.83□□□□□ -0.52
SMARCA4-207ENST00000541122 E7EQL1 145 aa11.83□□□□□ -0.52
SMARCA4-207ENST00000541122 IGHV3-53P01767 116 aa11.83□□□□□ -0.52
SMARCA4-207ENST00000541122 RBMY1FQ15415 496 aaKnown RBP11.83□□□□□ -0.52
SMARCA4-207ENST00000541122 MSRB2Q9Y3D2 182 aa11.83□□□□□ -0.52
SMARCA4-207ENST00000541122 B4DSR2 109 aa11.82□□□□□ -0.52
SMARCA4-207ENST00000541122 FOXI1Q12951 378 aa11.82□□□□□ -0.52
SMARCA4-207ENST00000541122 RNF138Q8WVD3 245 aa11.82□□□□□ -0.52
SMARCA4-207ENST00000541122 FXYD2P54710 66 aa11.82□□□□□ -0.52
SMARCA4-207ENST00000541122 KAAG1Q9UBP8 84 aa11.82□□□□□ -0.52
SMARCA4-207ENST00000541122 INS-IGF2F8WCM5 200 aa11.82□□□□□ -0.52
SMARCA4-207ENST00000541122 SYNJ2BPP57105 145 aa11.81□□□□□ -0.52
SMARCA4-207ENST00000541122 TMEM258P61165 79 aa11.81□□□□□ -0.52
SMARCA4-207ENST00000541122 WFDC2Q14508 124 aa11.81□□□□□ -0.52
SMARCA4-207ENST00000541122 SMIM20Q8N5G0 67 aa11.81□□□□□ -0.52
SMARCA4-207ENST00000541122 HEATR1Q9H583 2144 aaKnown RBP11.81□□□□□ -0.52
SMARCA4-207ENST00000541122 DUX4L9Q6RFH8 374 aaPredicted RBP11.81□□□□□ -0.52
SMARCA4-207ENST00000541122 TRBV6-1A0A0K0K1D8 114 aa11.8□□□□□ -0.52
SMARCA4-207ENST00000541122 SPATA12Q7Z6I5 190 aa11.8□□□□□ -0.52
SMARCA4-207ENST00000541122 PLXND1Q9Y4D7 1925 aa11.8□□□□□ -0.52
SMARCA4-207ENST00000541122 MGAMO43451 1857 aa11.8□□□□□ -0.52
SMARCA4-207ENST00000541122 ATOX1O00244 68 aa11.8□□□□□ -0.52
SMARCA4-207ENST00000541122 DEFB131AP59861 70 aa11.8□□□□□ -0.52
SMARCA4-207ENST00000541122 TMEM243Q9BU79 118 aa11.8□□□□□ -0.52
SMARCA4-207ENST00000541122 THSD7BQ9C0I4 1608 aa11.8□□□□□ -0.52
SMARCA4-207ENST00000541122 SPINK13Q1W4C9 94 aa11.8□□□□□ -0.52
SMARCA4-207ENST00000541122 HAMPP81172 84 aa11.79□□□□□ -0.52
SMARCA4-207ENST00000541122 FAM167A-AS1Q96KT0 104 aa11.79□□□□□ -0.52
SMARCA4-207ENST00000541122 DYNAPQ8N1N2 210 aa11.79□□□□□ -0.52
SMARCA4-207ENST00000541122 CFHR4Q92496 578 aa11.79□□□□□ -0.52
SMARCA4-207ENST00000541122 HELZP42694 1942 aaKnown RBP11.79□□□□□ -0.52
SMARCA4-207ENST00000541122 DENND4AQ7Z401 1863 aa11.79□□□□□ -0.52
SMARCA4-207ENST00000541122 BAALC-AS2P0C853 105 aa11.79□□□□□ -0.52
SMARCA4-207ENST00000541122 CR1LQ2VPA4 569 aa11.79□□□□□ -0.52
SMARCA4-207ENST00000541122 BRD3OSQ6XYD6 125 aa11.79□□□□□ -0.52
SMARCA4-207ENST00000541122 C11orf53Q8IXP5 236 aa11.78□□□□□ -0.52
SMARCA4-207ENST00000541122 C17orf77Q96MU5 243 aa11.78□□□□□ -0.52
SMARCA4-207ENST00000541122 AGPAT4-IT1Q9H0P7 198 aa11.78□□□□□ -0.52
SMARCA4-207ENST00000541122 J3KT08 172 aa11.78□□□□□ -0.52
SMARCA4-207ENST00000541122 HERV-K104P63124 156 aa11.78□□□□□ -0.52
SMARCA4-207ENST00000541122 LINC01620Q4KN68 170 aa11.78□□□□□ -0.52
SMARCA4-207ENST00000541122 THADAQ6YHU6 1953 aa11.78□□□□□ -0.52
SMARCA4-207ENST00000541122 KNCNA6PVL3 124 aa11.78□□□□□ -0.52
SMARCA4-207ENST00000541122 GTSF1Q8WW33 167 aa11.78□□□□□ -0.52
SMARCA4-207ENST00000541122 KLK9Q9UKQ9 250 aa11.78□□□□□ -0.52
SMARCA4-207ENST00000541122 CACNA1EQ15878 2313 aa11.78□□□□□ -0.52
SMARCA4-207ENST00000541122 CRLF1O75462 422 aa11.78□□□□□ -0.52
SMARCA4-207ENST00000541122 FGF23Q9GZV9 251 aaPredicted RBP11.78□□□□□ -0.52
SMARCA4-207ENST00000541122 DSCR8Q96T75 97 aa11.77□□□□□ -0.52
SMARCA4-207ENST00000541122 PATE2Q6UY27 113 aa11.77□□□□□ -0.52
SMARCA4-207ENST00000541122 FER1L5A0AVI2 2057 aa11.77□□□□□ -0.53
SMARCA4-207ENST00000541122 C2orf70A6NJV1 201 aa11.77□□□□□ -0.53
SMARCA4-207ENST00000541122 AKAP6Q13023 2319 aa11.77□□□□□ -0.53
SMARCA4-207ENST00000541122 A0A0B4J2C4 111 aa11.77□□□□□ -0.53
SMARCA4-207ENST00000541122 H3BUA1 57 aa11.76□□□□□ -0.53
SMARCA4-207ENST00000541122 PFN2P35080 140 aa11.76□□□□□ -0.53
SMARCA4-207ENST00000541122 TCTEX1D4Q5JR98 221 aa11.76□□□□□ -0.53
SMARCA4-207ENST00000541122 UBE2E2Q96LR5 201 aa11.76□□□□□ -0.53
SMARCA4-207ENST00000541122 G3V318 75 aa11.76□□□□□ -0.53
SMARCA4-207ENST00000541122 E9PLD3 99 aa11.75□□□□□ -0.53
SMARCA4-207ENST00000541122 ICOSQ9Y6W8 199 aa11.75□□□□□ -0.53
SMARCA4-207ENST00000541122 IGHV7-4-1A0A0J9YVY3 117 aa11.75□□□□□ -0.53
SMARCA4-207ENST00000541122 YPEL4Q96NS1 127 aa11.75□□□□□ -0.53
SMARCA4-207ENST00000541122 KMT2EQ8IZD2 1858 aa11.75□□□□□ -0.53
SMARCA4-207ENST00000541122 H3BT86 120 aa11.75□□□□□ -0.53
SMARCA4-207ENST00000541122 DIAPH2-AS1Q14236 149 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms