RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 CCL18P55774 89 aa5.06□□□□□ -1.6
YBX3-209ENST00000540747 ATP5IP56385 69 aaPredicted RBP5.06□□□□□ -1.6
YBX3-209ENST00000540747 DLK1P80370 383 aa5.06□□□□□ -1.6
YBX3-209ENST00000540747 PNRC1Q12796 327 aaPredicted RBP5.06□□□□□ -1.6
YBX3-209ENST00000540747 ZNF674Q2M3X9 581 aa5.06□□□□□ -1.6
YBX3-209ENST00000540747 ACOT6Q3I5F7 207 aaPredicted RBP5.06□□□□□ -1.6
YBX3-209ENST00000540747 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.06□□□□□ -1.6
YBX3-209ENST00000540747 Q6ZRN7 208 aaPredicted RBP5.06□□□□□ -1.6
YBX3-209ENST00000540747 IQCF2Q8IXL9 164 aa5.06□□□□□ -1.6
YBX3-209ENST00000540747 LINC00612Q8N6U2 182 aa5.06□□□□□ -1.6
YBX3-209ENST00000540747 CYB561D1Q8N8Q1 229 aa5.06□□□□□ -1.6
YBX3-209ENST00000540747 THAP8Q8NA92 274 aa5.06□□□□□ -1.6
YBX3-209ENST00000540747 TRGV9Q99603 122 aa5.06□□□□□ -1.6
YBX3-209ENST00000540747 C12orf57Q99622 126 aa5.06□□□□□ -1.6
YBX3-209ENST00000540747 TCEAL7Q9BRU2 100 aa5.06□□□□□ -1.6
YBX3-209ENST00000540747 UPK3BQ9BT76 320 aa5.06□□□□□ -1.6
YBX3-209ENST00000540747 MAP1LC3BQ9GZQ8 125 aa5.06□□□□□ -1.6
YBX3-209ENST00000540747 SLC45A2Q9UMX9 530 aa5.06□□□□□ -1.6
YBX3-209ENST00000540747 CTXND1A0A1B0GTU2 59 aa5.05□□□□□ -1.6
YBX3-209ENST00000540747 A0A1W2PPQ1 181 aa5.05□□□□□ -1.6
YBX3-209ENST00000540747 C5orf52A6NGY3 159 aa5.05□□□□□ -1.6
YBX3-209ENST00000540747 PRSS46E5RG02 174 aa5.05□□□□□ -1.6
YBX3-209ENST00000540747 F5H768 121 aa5.05□□□□□ -1.6
YBX3-209ENST00000540747 NUDT3O95989 172 aa5.05□□□□□ -1.6
YBX3-209ENST00000540747 FGF8P55075 233 aaPredicted RBP5.05□□□□□ -1.6
YBX3-209ENST00000540747 XGP55808 180 aa5.05□□□□□ -1.6
YBX3-209ENST00000540747 LYZP61626 148 aa5.05□□□□□ -1.6
YBX3-209ENST00000540747 B2MP61769 119 aa5.05□□□□□ -1.6
YBX3-209ENST00000540747 SPINK13Q1W4C9 94 aa5.05□□□□□ -1.6
YBX3-209ENST00000540747 TMEM241Q24JQ0 296 aa5.05□□□□□ -1.6
YBX3-209ENST00000540747 TTC32Q5I0X7 151 aa5.05□□□□□ -1.6
YBX3-209ENST00000540747 FFAR4Q5NUL3 377 aa5.05□□□□□ -1.6
YBX3-209ENST00000540747 SSX7Q7RTT5 188 aa5.05□□□□□ -1.6
YBX3-209ENST00000540747 OR8I2Q8N0Y5 310 aa5.05□□□□□ -1.6
YBX3-209ENST00000540747 OR10G9Q8NGN4 311 aa5.05□□□□□ -1.6
YBX3-209ENST00000540747 OR10G7Q8NGN6 311 aa5.05□□□□□ -1.6
YBX3-209ENST00000540747 ZNF503Q96F45 646 aa5.05□□□□□ -1.6
YBX3-209ENST00000540747 CTDSP1Q9GZU7 261 aa5.05□□□□□ -1.6
YBX3-209ENST00000540747 Q9H8V8 135 aa5.05□□□□□ -1.6
YBX3-209ENST00000540747 UBR4Q5T4S7 5183 aa5.04□□□□□ -1.6
YBX3-209ENST00000540747 EPM2AB3EWF7 344 aa5.04□□□□□ -1.6
YBX3-209ENST00000540747 NDUFS6O75380 124 aaKnown RBP5.04□□□□□ -1.6
YBX3-209ENST00000540747 EIF3GO75821 320 aaKnown RBP eCLIP5.04□□□□□ -1.6
YBX3-209ENST00000540747 DUSP14O95147 198 aaKnown RBP5.04□□□□□ -1.6
YBX3-209ENST00000540747 FABP1P07148 127 aa5.04□□□□□ -1.6
YBX3-209ENST00000540747 GALR1P47211 349 aa5.04□□□□□ -1.6
YBX3-209ENST00000540747 NDUFA6P56556 154 aa5.04□□□□□ -1.6
YBX3-209ENST00000540747 S100A12P80511 92 aa5.04□□□□□ -1.6
YBX3-209ENST00000540747 FABP9Q0Z7S8 132 aa5.04□□□□□ -1.6
YBX3-209ENST00000540747 ZNF726P1Q15940 193 aa5.04□□□□□ -1.6
YBX3-209ENST00000540747 RNASE8Q8TDE3 154 aaKnown RBP5.04□□□□□ -1.6
YBX3-209ENST00000540747 SLC35E1Q96K37 410 aa5.04□□□□□ -1.6
YBX3-209ENST00000540747 C16orf92Q96LL3 132 aa5.04□□□□□ -1.6
YBX3-209ENST00000540747 TMEM208Q9BTX3 173 aa5.04□□□□□ -1.6
YBX3-209ENST00000540747 SDF2L1Q9HCN8 221 aa5.04□□□□□ -1.6
YBX3-209ENST00000540747 MANBALQ9NQG1 85 aa5.04□□□□□ -1.6
YBX3-209ENST00000540747 NAT8Q9UHE5 227 aa5.04□□□□□ -1.6
YBX3-209ENST00000540747 MRPS16Q9Y3D3 137 aaKnown RBP5.04□□□□□ -1.6
YBX3-209ENST00000540747 TRAV12-2A0A075B6T6 113 aa5.03□□□□□ -1.6
YBX3-209ENST00000540747 A0A1W2PPV4 95 aa5.03□□□□□ -1.6
YBX3-209ENST00000540747 SMCO3A2RU48 225 aa5.03□□□□□ -1.6
YBX3-209ENST00000540747 INAFM2P0DMQ5 153 aa5.03□□□□□ -1.6
YBX3-209ENST00000540747 HOXA5P20719 270 aa5.03□□□□□ -1.6
YBX3-209ENST00000540747 S100PP25815 95 aa5.03□□□□□ -1.6
YBX3-209ENST00000540747 S100A2P29034 98 aa5.03□□□□□ -1.6
YBX3-209ENST00000540747 TAS2R60P59551 318 aa5.03□□□□□ -1.6
YBX3-209ENST00000540747 RAB31Q13636 194 aa5.03□□□□□ -1.6
YBX3-209ENST00000540747 ESRGQ1W209 222 aa5.03□□□□□ -1.6
YBX3-209ENST00000540747 IGFL4Q6B9Z1 124 aa5.03□□□□□ -1.6
YBX3-209ENST00000540747 LYPD1Q8N2G4 141 aa5.03□□□□□ -1.6
YBX3-209ENST00000540747 TMEM256Q8N2U0 113 aa5.03□□□□□ -1.6
YBX3-209ENST00000540747 RNF182Q8N6D2 247 aa5.03□□□□□ -1.6
YBX3-209ENST00000540747 OR1B1Q8NGR6 318 aa5.03□□□□□ -1.6
YBX3-209ENST00000540747 C16orf74Q96GX8 76 aa5.03□□□□□ -1.6
YBX3-209ENST00000540747 GPR82Q96P67 336 aa5.03□□□□□ -1.6
YBX3-209ENST00000540747 SMIM7Q9BQ49 75 aa5.03□□□□□ -1.6
YBX3-209ENST00000540747 GGACTQ9BVM4 153 aa5.03□□□□□ -1.6
YBX3-209ENST00000540747 SLC25A39Q9BZJ4 359 aaPredicted RBP5.03□□□□□ -1.6
YBX3-209ENST00000540747 TMPRSS5Q9H3S3 457 aa5.03□□□□□ -1.6
YBX3-209ENST00000540747 KCNIP2Q9NS61 270 aa5.03□□□□□ -1.6
YBX3-209ENST00000540747 TMEM242Q9NWH2 141 aa5.03□□□□□ -1.6
YBX3-209ENST00000540747 TRAV26-1A0A087WT03 109 aa5.02□□□□□ -1.61
YBX3-209ENST00000540747 PMS2P5A8MQ11 134 aa5.02□□□□□ -1.61
YBX3-209ENST00000540747 TMEM250H0YL14 139 aa5.02□□□□□ -1.61
YBX3-209ENST00000540747 H3BNG1 76 aa5.02□□□□□ -1.61
YBX3-209ENST00000540747 H3BRN7 92 aa5.02□□□□□ -1.61
YBX3-209ENST00000540747 MPDU1O75352 247 aa5.02□□□□□ -1.61
YBX3-209ENST00000540747 SMIM6P0DI80 62 aa5.02□□□□□ -1.61
YBX3-209ENST00000540747 CDC34P49427 236 aaPredicted RBP5.02□□□□□ -1.61
YBX3-209ENST00000540747 LINC00315P59091 139 aa5.02□□□□□ -1.61
YBX3-209ENST00000540747 MEF2BQ02080 365 aaPredicted RBP5.02□□□□□ -1.61
YBX3-209ENST00000540747 ELOBQ15370 118 aa5.02□□□□□ -1.61
YBX3-209ENST00000540747 ADIRFQ15847 76 aa5.02□□□□□ -1.61
YBX3-209ENST00000540747 VWC2Q2TAL6 325 aa5.02□□□□□ -1.61
YBX3-209ENST00000540747 ZNF493Q6ZR52 646 aa5.02□□□□□ -1.61
YBX3-209ENST00000540747 OR8A1Q8NGG7 326 aa5.02□□□□□ -1.61
YBX3-209ENST00000540747 TMEM263Q8WUH6 116 aaKnown RBP5.02□□□□□ -1.61
YBX3-209ENST00000540747 RAB24Q969Q5 203 aa5.02□□□□□ -1.61
YBX3-209ENST00000540747 YPEL4Q96NS1 127 aa5.02□□□□□ -1.61
YBX3-209ENST00000540747 UHRF2Q96PU4 802 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms