RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 CCDC58Q4VC31 144 aa0.51□□□□□ -2.33
MDM2-227ENST00000540709 CLLU1Q5K131 121 aa0.51□□□□□ -2.33
MDM2-227ENST00000540709 UNQ5815/PRO19632Q6UWF5 114 aa0.51□□□□□ -2.33
MDM2-227ENST00000540709 STRCQ7RTU9 1775 aa0.51□□□□□ -2.33
MDM2-227ENST00000540709 Q86TA4 180 aa0.51□□□□□ -2.33
MDM2-227ENST00000540709 UBR2Q8IWV8 1755 aa0.51□□□□□ -2.33
MDM2-227ENST00000540709 LINC00269Q8N2A0 174 aa0.51□□□□□ -2.33
MDM2-227ENST00000540709 TCTEX1D1Q8N7M0 179 aa0.51□□□□□ -2.33
MDM2-227ENST00000540709 PLPP5Q8NEB5 264 aa0.51□□□□□ -2.33
MDM2-227ENST00000540709 OR4S1Q8NGB4 309 aa0.51□□□□□ -2.33
MDM2-227ENST00000540709 OR8J3Q8NGG0 315 aa0.51□□□□□ -2.33
MDM2-227ENST00000540709 CCL4L1Q8NHW4 92 aa0.51□□□□□ -2.33
MDM2-227ENST00000540709 OTOSQ8NHW6 89 aa0.51□□□□□ -2.33
MDM2-227ENST00000540709 NAT14Q8WUY8 206 aa0.51□□□□□ -2.33
MDM2-227ENST00000540709 PFDN5Q99471 154 aa0.51□□□□□ -2.33
MDM2-227ENST00000540709 DSPPQ9NZW4 1301 aa0.51□□□□□ -2.33
MDM2-227ENST00000540709 COMMD3Q9UBI1 195 aa0.51□□□□□ -2.33
MDM2-227ENST00000540709 MED23Q9ULK4 1368 aa0.51□□□□□ -2.33
MDM2-227ENST00000540709 MPC1Q9Y5U8 109 aa0.51□□□□□ -2.33
MDM2-227ENST00000540709 HLA-DRB4X5D2U9 266 aa0.51□□□□□ -2.33
MDM2-227ENST00000540709 INTS1Q8N201 2190 aaKnown RBP0.5□□□□□ -2.33
MDM2-227ENST00000540709 CECR2Q9BXF3 1484 aa0.5□□□□□ -2.33
MDM2-227ENST00000540709 FHAD1B1AJZ9 1412 aa0.5□□□□□ -2.33
MDM2-227ENST00000540709 FAM135BQ49AJ0 1406 aa0.5□□□□□ -2.33
MDM2-227ENST00000540709 FGD6Q6ZV73 1430 aa0.5□□□□□ -2.33
MDM2-227ENST00000540709 KIAA1107Q9UPP5 1409 aa0.5□□□□□ -2.33
MDM2-227ENST00000540709 TRAV17A0A0B4J275 112 aa0.5□□□□□ -2.33
MDM2-227ENST00000540709 TMEM30CPA0ZSE6 113 aa0.5□□□□□ -2.33
MDM2-227ENST00000540709 IGHV3-33P01772 117 aa0.5□□□□□ -2.33
MDM2-227ENST00000540709 CD14P08571 375 aa0.5□□□□□ -2.33
MDM2-227ENST00000540709 AKR1D1P51857 326 aa0.5□□□□□ -2.33
MDM2-227ENST00000540709 POLR2JP52435 117 aaKnown RBP0.5□□□□□ -2.33
MDM2-227ENST00000540709 FXYD4P59646 89 aa0.5□□□□□ -2.33
MDM2-227ENST00000540709 QRFPP83859 136 aa0.5□□□□□ -2.33
MDM2-227ENST00000540709 SMIM21Q3B7S5 101 aa0.5□□□□□ -2.33
MDM2-227ENST00000540709 TMEM91Q6ZNR0 172 aa0.5□□□□□ -2.33
MDM2-227ENST00000540709 LINC00299Q6ZSB3 139 aa0.5□□□□□ -2.33
MDM2-227ENST00000540709 AMELYQ99218 206 aa0.5□□□□□ -2.33
MDM2-227ENST00000540709 TSC22D3Q99576 134 aa0.5□□□□□ -2.33
MDM2-227ENST00000540709 VPS25Q9BRG1 176 aa0.5□□□□□ -2.33
MDM2-227ENST00000540709 LIMD2Q9BT23 127 aa0.5□□□□□ -2.33
MDM2-227ENST00000540709 SLC35B3Q9H1N7 401 aa0.5□□□□□ -2.33
MDM2-227ENST00000540709 TPT1P8Q9HAU6 139 aa0.5□□□□□ -2.33
MDM2-227ENST00000540709 MRPL36Q9P0J6 103 aaKnown RBP0.5□□□□□ -2.33
MDM2-227ENST00000540709 BRWD1Q9NSI6 2320 aa0.5□□□□□ -2.33
MDM2-227ENST00000540709 HEATR1Q9H583 2144 aaKnown RBP0.5□□□□□ -2.33
MDM2-227ENST00000540709 ZFC3H1O60293 1989 aaKnown RBP0.5□□□□□ -2.33
MDM2-227ENST00000540709 TCOF1Q13428 1488 aaKnown RBP0.49□□□□□ -2.33
MDM2-227ENST00000540709 SOGA1O94964 1423 aa0.49□□□□□ -2.33
MDM2-227ENST00000540709 EXPH5Q8NEV8 1989 aa0.49□□□□□ -2.33
MDM2-227ENST00000540709 TANC2Q9HCD6 1990 aa0.49□□□□□ -2.33
MDM2-227ENST00000540709 A0A0G2JMM0 328 aa0.49□□□□□ -2.33
MDM2-227ENST00000540709 NUPR2A6NF83 97 aa0.49□□□□□ -2.33
MDM2-227ENST00000540709 ZNF727A8MUV8 499 aa0.49□□□□□ -2.33
MDM2-227ENST00000540709 M0R129 80 aa0.49□□□□□ -2.33
MDM2-227ENST00000540709 IGKCP01834 107 aa0.49□□□□□ -2.33
MDM2-227ENST00000540709 CD3DP04234 171 aa0.49□□□□□ -2.33
MDM2-227ENST00000540709 IGLC6P0CF74 106 aa0.49□□□□□ -2.33
MDM2-227ENST00000540709 MPC1LP0DKB6 136 aa0.49□□□□□ -2.33
MDM2-227ENST00000540709 EVI2AP22794 236 aa0.49□□□□□ -2.33
MDM2-227ENST00000540709 COPZ1P61923 177 aa0.49□□□□□ -2.33
MDM2-227ENST00000540709 S100A12P80511 92 aa0.49□□□□□ -2.33
MDM2-227ENST00000540709 PLGLB1Q02325 96 aa0.49□□□□□ -2.33
MDM2-227ENST00000540709 RHOHQ15669 191 aa0.49□□□□□ -2.33
MDM2-227ENST00000540709 MORN2Q502X0 79 aa0.49□□□□□ -2.33
MDM2-227ENST00000540709 Q5XG85 94 aa0.49□□□□□ -2.33
MDM2-227ENST00000540709 CSAG1Q6PB30 78 aa0.49□□□□□ -2.33
MDM2-227ENST00000540709 KRTAP26-1Q6PEX3 210 aa0.49□□□□□ -2.33
MDM2-227ENST00000540709 IZUMO2Q6UXV1 221 aa0.49□□□□□ -2.33
MDM2-227ENST00000540709 SLC25A26Q70HW3 274 aa0.49□□□□□ -2.33
MDM2-227ENST00000540709 SNX29P2Q8IUI4 249 aa0.49□□□□□ -2.33
MDM2-227ENST00000540709 CTAGE3PQ8IX95 158 aa0.49□□□□□ -2.33
MDM2-227ENST00000540709 OR10AC1Q8NH08 325 aa0.49□□□□□ -2.33
MDM2-227ENST00000540709 TCEAL4Q96EI5 215 aa0.49□□□□□ -2.33
MDM2-227ENST00000540709 PSMG3Q9BT73 122 aaPredicted RBP0.49□□□□□ -2.33
MDM2-227ENST00000540709 LPAR5Q9H1C0 372 aa0.49□□□□□ -2.33
MDM2-227ENST00000540709 METTL1Q9UBP6 276 aaKnown RBP0.49□□□□□ -2.33
MDM2-227ENST00000540709 NOP16Q9Y3C1 178 aaKnown RBP0.49□□□□□ -2.33
MDM2-227ENST00000540709 DNAJC15Q9Y5T4 150 aa0.49□□□□□ -2.33
MDM2-227ENST00000540709 PIK3C2AO00443 1686 aa0.49□□□□□ -2.33
MDM2-227ENST00000540709 COL4A5P29400 1685 aa0.49□□□□□ -2.33
MDM2-227ENST00000540709 DIDO1Q9BTC0 2240 aaKnown RBP0.49□□□□□ -2.33
MDM2-227ENST00000540709 PTPRFP10586 1907 aa0.48□□□□□ -2.33
MDM2-227ENST00000540709 ANKRD31Q8N7Z5 1873 aa0.48□□□□□ -2.33
MDM2-227ENST00000540709 ROS1P08922 2347 aa0.48□□□□□ -2.33
MDM2-227ENST00000540709 RFX7Q2KHR2 1363 aa0.48□□□□□ -2.33
MDM2-227ENST00000540709 CCDC171Q6TFL3 1326 aa0.48□□□□□ -2.33
MDM2-227ENST00000540709 A0A0J9YY99 117 aa0.48□□□□□ -2.33
MDM2-227ENST00000540709 TRBV30A0A0K0K1B3 111 aa0.48□□□□□ -2.33
MDM2-227ENST00000540709 TPST1O60507 370 aa0.48□□□□□ -2.33
MDM2-227ENST00000540709 YPEL1O60688 119 aa0.48□□□□□ -2.33
MDM2-227ENST00000540709 IGLV3-1P01715 115 aa0.48□□□□□ -2.33
MDM2-227ENST00000540709 APOC1P02654 83 aa0.48□□□□□ -2.33
MDM2-227ENST00000540709 TFF1P04155 84 aa0.48□□□□□ -2.33
MDM2-227ENST00000540709 HMGN1P05114 100 aa0.48□□□□□ -2.33
MDM2-227ENST00000540709 GYPBP06028 91 aa0.48□□□□□ -2.33
MDM2-227ENST00000540709 LINC00694P0DN24 101 aa0.48□□□□□ -2.33
MDM2-227ENST00000540709 CCL4P13236 92 aa0.48□□□□□ -2.33
MDM2-227ENST00000540709 ADCYAP1P18509 176 aa0.48□□□□□ -2.33
MDM2-227ENST00000540709 EFNA4P52798 201 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms