RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 LINC00311Q8N616 119 aa7.91□□□□□ -1.14
TRAF1-202ENST00000540010 ITLN2Q8WWU7 325 aaPredicted RBP7.91□□□□□ -1.14
TRAF1-202ENST00000540010 TOMM7Q9P0U1 55 aa7.91□□□□□ -1.14
TRAF1-202ENST00000540010 TRBV19A0A075B6N1 114 aa7.91□□□□□ -1.14
TRAF1-202ENST00000540010 TRAV12-3A0A0B4J271 114 aa7.91□□□□□ -1.14
TRAF1-202ENST00000540010 TNFRSF6BO95407 300 aa7.91□□□□□ -1.14
TRAF1-202ENST00000540010 POU2AF1Q16633 256 aa7.91□□□□□ -1.14
TRAF1-202ENST00000540010 LINC00173Q6ZV60 143 aa7.91□□□□□ -1.14
TRAF1-202ENST00000540010 UBE2L6O14933 153 aa7.91□□□□□ -1.14
TRAF1-202ENST00000540010 COX6B1P14854 86 aa7.91□□□□□ -1.14
TRAF1-202ENST00000540010 FAM104BQ5XKR9 115 aa7.91□□□□□ -1.14
TRAF1-202ENST00000540010 RAX2Q96IS3 184 aa7.91□□□□□ -1.14
TRAF1-202ENST00000540010 PKD1L2Q7Z442 2459 aa7.91□□□□□ -1.14
TRAF1-202ENST00000540010 NDUFS7O75251 213 aa7.9□□□□□ -1.14
TRAF1-202ENST00000540010 OR13C6PQ8NH95 151 aa7.9□□□□□ -1.14
TRAF1-202ENST00000540010 DUX3Q96PT4 197 aa7.9□□□□□ -1.14
TRAF1-202ENST00000540010 CHAC1Q9BUX1 264 aa7.9□□□□□ -1.14
TRAF1-202ENST00000540010 ZNF688P0C7X2 276 aa7.9□□□□□ -1.14
TRAF1-202ENST00000540010 NPC2P61916 151 aa7.9□□□□□ -1.14
TRAF1-202ENST00000540010 RRN3P1Q2M238 152 aa7.9□□□□□ -1.14
TRAF1-202ENST00000540010 LYPD1Q8N2G4 141 aa7.9□□□□□ -1.14
TRAF1-202ENST00000540010 ZC2HC1AQ96GY0 325 aa7.9□□□□□ -1.14
TRAF1-202ENST00000540010 NPFFO15130 113 aa7.9□□□□□ -1.15
TRAF1-202ENST00000540010 NDUFB8O95169 186 aa7.9□□□□□ -1.15
TRAF1-202ENST00000540010 ETDBQ3ZM63 59 aa7.9□□□□□ -1.15
TRAF1-202ENST00000540010 IGHV3-73A0A0B4J1V6 119 aa7.89□□□□□ -1.15
TRAF1-202ENST00000540010 C22orf46C9J442 243 aa7.89□□□□□ -1.15
TRAF1-202ENST00000540010 NPFFR1Q9GZQ6 430 aa7.89□□□□□ -1.15
TRAF1-202ENST00000540010 GFRA4Q9GZZ7 299 aa7.89□□□□□ -1.15
TRAF1-202ENST00000540010 ZZEF1O43149 2961 aa7.89□□□□□ -1.15
TRAF1-202ENST00000540010 IGKV1OR2-108A0A075B7D4 117 aa7.89□□□□□ -1.15
TRAF1-202ENST00000540010 MRPL51Q4U2R6 128 aaKnown RBP7.89□□□□□ -1.15
TRAF1-202ENST00000540010 C8orf31Q8N9H6 132 aa7.89□□□□□ -1.15
TRAF1-202ENST00000540010 H7C1H1 209 aa7.89□□□□□ -1.15
TRAF1-202ENST00000540010 CCL25O15444 150 aa7.89□□□□□ -1.15
TRAF1-202ENST00000540010 PRTN3P24158 256 aa7.89□□□□□ -1.15
TRAF1-202ENST00000540010 SIGLEC8Q9NYZ4 499 aa7.89□□□□□ -1.15
TRAF1-202ENST00000540010 ZNF492Q9P255 531 aa7.89□□□□□ -1.15
TRAF1-202ENST00000540010 SMPXQ9UHP9 88 aa7.89□□□□□ -1.15
TRAF1-202ENST00000540010 TRAV41A0A0B4J266 112 aa7.89□□□□□ -1.15
TRAF1-202ENST00000540010 G3V318 75 aa7.89□□□□□ -1.15
TRAF1-202ENST00000540010 IGLC1P0CG04 106 aa7.89□□□□□ -1.15
TRAF1-202ENST00000540010 SCGB1A1P11684 91 aa7.89□□□□□ -1.15
TRAF1-202ENST00000540010 CCL19Q99731 98 aa7.89□□□□□ -1.15
TRAF1-202ENST00000540010 PGPEP1Q9NXJ5 209 aa7.89□□□□□ -1.15
TRAF1-202ENST00000540010 A0A087WWL8 130 aa7.88□□□□□ -1.15
TRAF1-202ENST00000540010 TRAV26-2A0A0B4J265 109 aa7.88□□□□□ -1.15
TRAF1-202ENST00000540010 NPYP01303 97 aa7.88□□□□□ -1.15
TRAF1-202ENST00000540010 C11orf44Q8N8P7 122 aa7.88□□□□□ -1.15
TRAF1-202ENST00000540010 ESDP10768 282 aa7.88□□□□□ -1.15
TRAF1-202ENST00000540010 CT83Q5H943 113 aa7.88□□□□□ -1.15
TRAF1-202ENST00000540010 BVES-AS1Q5T3Y7 98 aa7.88□□□□□ -1.15
TRAF1-202ENST00000540010 ADAMTSL5Q6ZMM2 481 aa7.88□□□□□ -1.15
TRAF1-202ENST00000540010 RNF5Q99942 180 aa7.88□□□□□ -1.15
TRAF1-202ENST00000540010 A8MWV9 139 aa7.88□□□□□ -1.15
TRAF1-202ENST00000540010 C19orf84I3L1E1 186 aa7.88□□□□□ -1.15
TRAF1-202ENST00000540010 DNAL4O96015 105 aa7.88□□□□□ -1.15
TRAF1-202ENST00000540010 HLA-DMBP28068 263 aa7.88□□□□□ -1.15
TRAF1-202ENST00000540010 EFNA4P52798 201 aa7.88□□□□□ -1.15
TRAF1-202ENST00000540010 GAGE1Q13065 139 aa7.88□□□□□ -1.15
TRAF1-202ENST00000540010 TMEM95Q3KNT9 176 aa7.88□□□□□ -1.15
TRAF1-202ENST00000540010 FAM120AOSQ5T036 256 aa7.88□□□□□ -1.15
TRAF1-202ENST00000540010 ZNF562Q6V9R5 426 aa7.88□□□□□ -1.15
TRAF1-202ENST00000540010 PRR25Q96S07 402 aa7.88□□□□□ -1.15
TRAF1-202ENST00000540010 LINC01587Q99440 93 aa7.88□□□□□ -1.15
TRAF1-202ENST00000540010 TSPAN13O95857 204 aa7.87□□□□□ -1.15
TRAF1-202ENST00000540010 PAX1P15863 534 aa7.87□□□□□ -1.15
TRAF1-202ENST00000540010 ZNF876PQ49A33 203 aa7.87□□□□□ -1.15
TRAF1-202ENST00000540010 CSTL1Q9H114 145 aa7.87□□□□□ -1.15
TRAF1-202ENST00000540010 COX8AP10176 69 aa7.87□□□□□ -1.15
TRAF1-202ENST00000540010 C11orf71Q6IPW1 123 aa7.87□□□□□ -1.15
TRAF1-202ENST00000540010 DTX2Q86UW9 622 aa7.87□□□□□ -1.15
TRAF1-202ENST00000540010 K7EP13 123 aa7.87□□□□□ -1.15
TRAF1-202ENST00000540010 PATE2Q6UY27 113 aa7.87□□□□□ -1.15
TRAF1-202ENST00000540010 IL17RELQ6ZVW7 336 aa7.87□□□□□ -1.15
TRAF1-202ENST00000540010 RITA1Q96K30 269 aa7.87□□□□□ -1.15
TRAF1-202ENST00000540010 DKK2Q9UBU2 259 aa7.87□□□□□ -1.15
TRAF1-202ENST00000540010 USP9YO00507 2555 aaPredicted RBP7.87□□□□□ -1.15
TRAF1-202ENST00000540010 AMTNQ6UX39 209 aa7.87□□□□□ -1.15
TRAF1-202ENST00000540010 VGLL1Q99990 258 aa7.87□□□□□ -1.15
TRAF1-202ENST00000540010 SPRY2O43597 315 aa7.86□□□□□ -1.15
TRAF1-202ENST00000540010 PDE6HQ13956 83 aa7.86□□□□□ -1.15
TRAF1-202ENST00000540010 USP9XQ93008 2570 aaPredicted RBP7.86□□□□□ -1.15
TRAF1-202ENST00000540010 E7EUB6 86 aa7.86□□□□□ -1.15
TRAF1-202ENST00000540010 H3BUX3 64 aa7.86□□□□□ -1.15
TRAF1-202ENST00000540010 IGLV1-47P01700 117 aa7.86□□□□□ -1.15
TRAF1-202ENST00000540010 CD28P10747 220 aa7.86□□□□□ -1.15
TRAF1-202ENST00000540010 SAA4P35542 130 aa7.86□□□□□ -1.15
TRAF1-202ENST00000540010 PAX2Q02962 417 aa7.86□□□□□ -1.15
TRAF1-202ENST00000540010 IGLC7A0M8Q6 106 aa7.86□□□□□ -1.15
TRAF1-202ENST00000540010 C1orf122Q6ZSJ8 110 aa7.86□□□□□ -1.15
TRAF1-202ENST00000540010 PCP2Q8IVA1 136 aa7.86□□□□□ -1.15
TRAF1-202ENST00000540010 TEX29Q8N6K0 151 aa7.86□□□□□ -1.15
TRAF1-202ENST00000540010 RNASE8Q8TDE3 154 aaKnown RBP7.86□□□□□ -1.15
TRAF1-202ENST00000540010 DPH3P1Q9H4G8 78 aa7.86□□□□□ -1.15
TRAF1-202ENST00000540010 MRPL35Q9NZE8 188 aaKnown RBP7.86□□□□□ -1.15
TRAF1-202ENST00000540010 A0A1W2PPR1 153 aa7.85□□□□□ -1.15
TRAF1-202ENST00000540010 K7ERJ3 54 aa7.85□□□□□ -1.15
TRAF1-202ENST00000540010 ZNF747Q9BV97 191 aa7.85□□□□□ -1.15
TRAF1-202ENST00000540010 ERG28Q9UKR5 140 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms