RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 UCNP55089 124 aa10.79□□□□□ -0.68
UBE3B-210ENST00000539599 PAX8Q06710 450 aa10.79□□□□□ -0.68
UBE3B-210ENST00000539599 C8orf86Q6ZUL3 223 aa10.79□□□□□ -0.68
UBE3B-210ENST00000539599 C5orf56Q8N8D9 126 aa10.79□□□□□ -0.68
UBE3B-210ENST00000539599 DEFB104AQ8WTQ1 72 aa10.79□□□□□ -0.68
UBE3B-210ENST00000539599 KIR3DS1Q14943 382 aa10.78□□□□□ -0.68
UBE3B-210ENST00000539599 C21orf62-AS1Q17RA5 79 aa10.78□□□□□ -0.68
UBE3B-210ENST00000539599 TM4SF20Q53R12 229 aa10.78□□□□□ -0.68
UBE3B-210ENST00000539599 PCP2Q8IVA1 136 aa10.78□□□□□ -0.68
UBE3B-210ENST00000539599 ORAOV1Q8WV07 137 aa10.78□□□□□ -0.68
UBE3B-210ENST00000539599 C20orf173Q96LM9 149 aa10.78□□□□□ -0.68
UBE3B-210ENST00000539599 FABP5P3A8MUU1 101 aa10.78□□□□□ -0.68
UBE3B-210ENST00000539599 OOSP1A8MZH6 123 aa10.78□□□□□ -0.68
UBE3B-210ENST00000539599 SMAD7O15105 426 aaKnown RBP10.78□□□□□ -0.68
UBE3B-210ENST00000539599 GOSR1O95249 250 aa10.78□□□□□ -0.68
UBE3B-210ENST00000539599 IGHV4-38-2P0DP08 117 aa10.78□□□□□ -0.68
UBE3B-210ENST00000539599 S100A7AQ86SG5 101 aa10.78□□□□□ -0.68
UBE3B-210ENST00000539599 UFC1Q9Y3C8 167 aa10.78□□□□□ -0.68
UBE3B-210ENST00000539599 IGHV4-61A0A0C4DH41 118 aa10.77□□□□□ -0.68
UBE3B-210ENST00000539599 A0A1B0GW15 77 aa10.77□□□□□ -0.68
UBE3B-210ENST00000539599 BMI1P35226 326 aa10.77□□□□□ -0.68
UBE3B-210ENST00000539599 F6UB75 175 aa10.77□□□□□ -0.69
UBE3B-210ENST00000539599 HBDP02042 147 aa10.77□□□□□ -0.69
UBE3B-210ENST00000539599 NMUP48645 174 aa10.77□□□□□ -0.69
UBE3B-210ENST00000539599 GLMPQ8WWB7 406 aa10.77□□□□□ -0.69
UBE3B-210ENST00000539599 COX8AP10176 69 aa10.77□□□□□ -0.69
UBE3B-210ENST00000539599 SRD5A1P18405 259 aa10.77□□□□□ -0.69
UBE3B-210ENST00000539599 UBE2V1Q13404 147 aa10.77□□□□□ -0.69
UBE3B-210ENST00000539599 PIFOQ8TCI5 191 aa10.77□□□□□ -0.69
UBE3B-210ENST00000539599 FGF6P10767 208 aa10.76□□□□□ -0.69
UBE3B-210ENST00000539599 LEPP41159 167 aa10.76□□□□□ -0.69
UBE3B-210ENST00000539599 WFDC12Q8WWY7 111 aa10.76□□□□□ -0.69
UBE3B-210ENST00000539599 NRGNQ92686 78 aa10.76□□□□□ -0.69
UBE3B-210ENST00000539599 IFI27L1Q96BM0 104 aa10.76□□□□□ -0.69
UBE3B-210ENST00000539599 KLK15Q9H2R5 256 aa10.76□□□□□ -0.69
UBE3B-210ENST00000539599 SORL1Q92673 2214 aa10.76□□□□□ -0.69
UBE3B-210ENST00000539599 FAM208BQ5VWN6 2430 aa10.76□□□□□ -0.69
UBE3B-210ENST00000539599 FBN2P35556 2912 aa10.76□□□□□ -0.69
UBE3B-210ENST00000539599 K7EMI3 77 aa10.76□□□□□ -0.69
UBE3B-210ENST00000539599 TNFRSF6BO95407 300 aa10.76□□□□□ -0.69
UBE3B-210ENST00000539599 K7EP13 123 aa10.75□□□□□ -0.69
UBE3B-210ENST00000539599 AMMECR1LQ6DCA0 310 aa10.75□□□□□ -0.69
UBE3B-210ENST00000539599 COX8CQ7Z4L0 72 aa10.75□□□□□ -0.69
UBE3B-210ENST00000539599 EEF1AKMT3Q96AZ1 226 aa10.75□□□□□ -0.69
UBE3B-210ENST00000539599 METTL26Q96S19 204 aa10.75□□□□□ -0.69
UBE3B-210ENST00000539599 FBLL1A6NHQ2 334 aaKnown RBP10.75□□□□□ -0.69
UBE3B-210ENST00000539599 H3BVH4 76 aa10.75□□□□□ -0.69
UBE3B-210ENST00000539599 BLCAPP62952 87 aa10.75□□□□□ -0.69
UBE3B-210ENST00000539599 C16orf92Q96LL3 132 aa10.75□□□□□ -0.69
UBE3B-210ENST00000539599 MXRA5Q9NR99 2828 aa10.74□□□□□ -0.69
UBE3B-210ENST00000539599 TRAV8-6A0A0B4J262 113 aa10.74□□□□□ -0.69
UBE3B-210ENST00000539599 TRAV41A0A0B4J266 112 aa10.74□□□□□ -0.69
UBE3B-210ENST00000539599 ATP5G2Q06055 141 aa10.74□□□□□ -0.69
UBE3B-210ENST00000539599 IGKV2D-26A0A0A0MRZ7 120 aa10.74□□□□□ -0.69
UBE3B-210ENST00000539599 SCGB2A1O75556 95 aa10.74□□□□□ -0.69
UBE3B-210ENST00000539599 RPL11P62913 178 aaKnown RBP10.74□□□□□ -0.69
UBE3B-210ENST00000539599 TMEM95Q3KNT9 176 aa10.74□□□□□ -0.69
UBE3B-210ENST00000539599 TMEM78Q5T7P6 136 aa10.74□□□□□ -0.69
UBE3B-210ENST00000539599 ACACBO00763 2458 aa10.73□□□□□ -0.69
UBE3B-210ENST00000539599 IGHV7-4-1A0A0J9YVY3 117 aa10.73□□□□□ -0.69
UBE3B-210ENST00000539599 LINC01559Q495D7 138 aa10.73□□□□□ -0.69
UBE3B-210ENST00000539599 DEFB125Q8N687 156 aa10.73□□□□□ -0.69
UBE3B-210ENST00000539599 OR4C5Q8NGB2 326 aa10.73□□□□□ -0.69
UBE3B-210ENST00000539599 MS4A6AQ9H2W1 248 aa10.73□□□□□ -0.69
UBE3B-210ENST00000539599 CREBBPQ92793 2442 aa10.73□□□□□ -0.69
UBE3B-210ENST00000539599 HIST1H1AQ02539 215 aaPredicted RBP10.73□□□□□ -0.69
UBE3B-210ENST00000539599 GPHB5Q86YW7 130 aa10.73□□□□□ -0.69
UBE3B-210ENST00000539599 TMEM158Q8WZ71 300 aa10.73□□□□□ -0.69
UBE3B-210ENST00000539599 MAP1LC3AQ9H492 121 aa10.73□□□□□ -0.69
UBE3B-210ENST00000539599 ZNF469Q96JG9 3925 aaPredicted RBP10.73□□□□□ -0.69
UBE3B-210ENST00000539599 ARL3P36405 182 aa10.72□□□□□ -0.69
UBE3B-210ENST00000539599 RPS20P60866 119 aaKnown RBP10.72□□□□□ -0.69
UBE3B-210ENST00000539599 RAB37Q96AX2 223 aa10.72□□□□□ -0.69
UBE3B-210ENST00000539599 C7orf71A4D174 169 aa10.71□□□□□ -0.69
UBE3B-210ENST00000539599 LRRK2Q5S007 2527 aa10.71□□□□□ -0.69
UBE3B-210ENST00000539599 DOPEY1Q5JWR5 2465 aa10.71□□□□□ -0.69
UBE3B-210ENST00000539599 ABCA12Q86UK0 2595 aa10.71□□□□□ -0.69
UBE3B-210ENST00000539599 H3BUX3 64 aa10.71□□□□□ -0.69
UBE3B-210ENST00000539599 M0R381 172 aa10.71□□□□□ -0.69
UBE3B-210ENST00000539599 LGALS9BQ3B8N2 356 aa10.71□□□□□ -0.69
UBE3B-210ENST00000539599 LGALS9CQ6DKI2 356 aa10.71□□□□□ -0.69
UBE3B-210ENST00000539599 PRSS1P07477 247 aa10.71□□□□□ -0.7
UBE3B-210ENST00000539599 FOXC2Q99958 501 aa10.71□□□□□ -0.7
UBE3B-210ENST00000539599 SPOCK3Q9BQ16 436 aa10.71□□□□□ -0.7
UBE3B-210ENST00000539599 SLC50A1Q9BRV3 221 aa10.71□□□□□ -0.7
UBE3B-210ENST00000539599 MOB4Q9Y3A3 225 aa10.71□□□□□ -0.7
UBE3B-210ENST00000539599 IGHV4-30-2A0A087WSY4 118 aa10.7□□□□□ -0.7
UBE3B-210ENST00000539599 IGHV1-69DA0A0B4J2H0 117 aa10.7□□□□□ -0.7
UBE3B-210ENST00000539599 IGHV1-69P01742 117 aa10.7□□□□□ -0.7
UBE3B-210ENST00000539599 TMEM97Q5BJF2 176 aa10.7□□□□□ -0.7
UBE3B-210ENST00000539599 SPANXN1Q5VSR9 72 aa10.7□□□□□ -0.7
UBE3B-210ENST00000539599 C12orf54Q6X4T0 127 aa10.7□□□□□ -0.7
UBE3B-210ENST00000539599 GTSCR1Q86UQ5 136 aa10.7□□□□□ -0.7
UBE3B-210ENST00000539599 TRBV7-1A0A0A6YYK4 115 aa10.7□□□□□ -0.7
UBE3B-210ENST00000539599 C10orf99Q6UWK7 81 aa10.7□□□□□ -0.7
UBE3B-210ENST00000539599 CNFNQ9BYD5 112 aa10.7□□□□□ -0.7
UBE3B-210ENST00000539599 AVPP01185 164 aa10.69□□□□□ -0.7
UBE3B-210ENST00000539599 PF4V1P10720 104 aa10.69□□□□□ -0.7
UBE3B-210ENST00000539599 RNF151Q2KHN1 245 aa10.69□□□□□ -0.7
UBE3B-210ENST00000539599 MAPK1IP1LQ8NDC0 245 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms