RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 MRPS24Q96EL2 167 aaKnown RBP0.47□□□□□ -2.33
HIF1A-204ENST00000539097 ANKRD36BP1Q96IX9 119 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 MCEEQ96PE7 176 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 FAIMQ9NVQ4 179 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 HIGD1AQ9Y241 93 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 PKIGQ9Y2B9 76 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 MINOS1-NBL1R4GNA1 71 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 STARD9Q9P2P6 4700 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 ZNF236Q9UL36 1845 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 FRYQ5TBA9 3013 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 DOT1LQ8TEK3 1739 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 DMXL1Q9Y485 3027 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 FAM208AQ9UK61 1670 aaKnown RBP0.47□□□□□ -2.33
HIF1A-204ENST00000539097 DUXBA0A1W2PPF3 345 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 TMEM212A6NML5 194 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 TRAPPC2LH3BP13 241 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 CCDC179H3BU77 68 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 PFDN6O15212 129 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 TCL1BO95988 128 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 TNFP01375 233 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 CRYGSP22914 178 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 S100PP25815 95 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 PSMB3P49720 205 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 DEFA3P59666 94 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 MEF2BQ02080 365 aaPredicted RBP0.47□□□□□ -2.33
HIF1A-204ENST00000539097 OR8G1Q15617 311 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 GLIPR1L1Q6UWM5 242 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 Q6ZS49 121 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 TRAPPC6BQ86SZ2 158 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 SLC35F6Q8N357 371 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 ZNF418Q8TF45 676 aaPredicted RBP0.47□□□□□ -2.33
HIF1A-204ENST00000539097 DIRC1Q969H9 104 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 DIRAS2Q96HU8 199 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 MED28Q9H204 178 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 TUBA4BQ9H853 241 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 RPRMQ9NS64 109 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 EPDR1Q9UM22 224 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 DNAJC15Q9Y5T4 150 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 V9GYQ6 96 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 FLGP20930 4061 aaPredicted RBP0.47□□□□□ -2.33
HIF1A-204ENST00000539097 SPTBN4Q9H254 2564 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 GBF1Q92538 1859 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 ZDBF2Q9HCK1 2354 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 PDZD2O15018 2839 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 FCGBPQ9Y6R7 5405 aaPredicted RBP0.47□□□□□ -2.33
HIF1A-204ENST00000539097 TRGV5A0A0B4J1U4 118 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 J3QKU1 62 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 K7EQS6 105 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 M0R2P5 195 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 ZNF73O43830 326 aaPredicted RBP0.47□□□□□ -2.33
HIF1A-204ENST00000539097 PDE6DO43924 150 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 SULT1C4O75897 302 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 IGLV6-57P01721 117 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 GZMBP10144 247 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 PPIBP23284 216 aaKnown RBP0.47□□□□□ -2.33
HIF1A-204ENST00000539097 BRS3P32247 399 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 HERVK_113P63121 156 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 HIST1H1AQ02539 215 aaPredicted RBP0.47□□□□□ -2.33
HIF1A-204ENST00000539097 ZNF90Q03938 601 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 RRN3P1Q2M238 152 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 AMTNQ6UX39 209 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 PP632Q6XCG6 107 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 ZNF705AQ6ZN79 300 aaPredicted RBP0.47□□□□□ -2.33
HIF1A-204ENST00000539097 RASSF6Q6ZTQ3 369 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 OR5C1Q8NGR4 320 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 ZNF675Q8TD23 568 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 MAGOHBQ96A72 148 aaKnown RBP0.47□□□□□ -2.33
HIF1A-204ENST00000539097 ZHX1-C8orf76Q96EF9 292 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 LXNQ9BS40 222 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 CST9LQ9H4G1 147 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 ZFP30Q9Y2G7 519 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 RBM7Q9Y580 266 aaKnown RBP0.47□□□□□ -2.33
HIF1A-204ENST00000539097 ARFGEF3Q5TH69 2177 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 CCDC168Q8NDH2 2452 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 EXPH5Q8NEV8 1989 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 WDFY4Q6ZS81 3184 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 C2CD3Q4AC94 2353 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 MYO15AQ9UKN7 3530 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 BORCS7-ASMTA0A0B4J1R7 106 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 IBA57-AS1B1ANH7 110 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 C5orf58C9J3I9 102 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 DEGS1O15121 323 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 SMIM24O75264 130 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 OR2H2O95918 312 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 IFNA7P01567 189 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 IL9P15248 144 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 GABRA3P34903 492 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 RBP2P50120 134 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 TAS2R30P59541 319 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 GNG5P63218 68 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 HBA1P69905 142 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 RNASE10Q5GAN6 216 aaKnown RBP0.46□□□□□ -2.34
HIF1A-204ENST00000539097 SAMD13Q5VXD3 122 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 AGTRAPQ6RW13 159 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 TEN1Q86WV5 123 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 TTC9CQ8N5M4 171 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 TMEM229BQ8NBD8 167 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 PFN4Q8NHR9 129 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 LSM10Q969L4 123 aaKnown RBP0.46□□□□□ -2.34
HIF1A-204ENST00000539097 MRPL57Q9BQC6 102 aaKnown RBP0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms