RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 PAXXQ9BUH6 204 aa8.55□□□□□ -1.04
VAMP1-206ENST00000538970 WDR61Q9GZS3 305 aaKnown RBP8.55□□□□□ -1.04
VAMP1-206ENST00000538970 SLC25A31Q9H0C2 315 aa8.55□□□□□ -1.04
VAMP1-206ENST00000538970 OR5AC2Q9NZP5 309 aa8.55□□□□□ -1.04
VAMP1-206ENST00000538970 RBAKDNA6NC62 111 aa8.54□□□□□ -1.04
VAMP1-206ENST00000538970 H0YIZ8 118 aa8.54□□□□□ -1.04
VAMP1-206ENST00000538970 SLAQ13239 276 aa8.54□□□□□ -1.04
VAMP1-206ENST00000538970 FHL2Q14192 279 aa8.54□□□□□ -1.04
VAMP1-206ENST00000538970 LRRC37A5PQ49AS3 106 aa8.54□□□□□ -1.04
VAMP1-206ENST00000538970 C8orf49Q96NF6 230 aa8.54□□□□□ -1.04
VAMP1-206ENST00000538970 NMES1Q9C002 83 aa8.54□□□□□ -1.04
VAMP1-206ENST00000538970 HHLA3Q9XRX5 114 aa8.54□□□□□ -1.04
VAMP1-206ENST00000538970 OR7C2O60412 319 aa8.53□□□□□ -1.04
VAMP1-206ENST00000538970 ZNF266Q14584 549 aa8.53□□□□□ -1.04
VAMP1-206ENST00000538970 MRPL23Q16540 153 aaKnown RBP8.53□□□□□ -1.04
VAMP1-206ENST00000538970 MUC21Q5SSG8 566 aa8.53□□□□□ -1.04
VAMP1-206ENST00000538970 LYPD5Q6UWN5 251 aa8.53□□□□□ -1.04
VAMP1-206ENST00000538970 LINC00299Q6ZSB3 139 aa8.53□□□□□ -1.04
VAMP1-206ENST00000538970 C17orf112F2Z3M2 114 aa8.52□□□□□ -1.05
VAMP1-206ENST00000538970 PRAF2O60831 178 aa8.52□□□□□ -1.05
VAMP1-206ENST00000538970 CSN1S1P47710 185 aa8.52□□□□□ -1.05
VAMP1-206ENST00000538970 ERVFC1-1P60608 527 aa8.52□□□□□ -1.05
VAMP1-206ENST00000538970 RANP62826 216 aaKnown RBP8.52□□□□□ -1.05
VAMP1-206ENST00000538970 UBE2L3P68036 154 aaKnown RBP8.52□□□□□ -1.05
VAMP1-206ENST00000538970 Q6AWC8 147 aa8.52□□□□□ -1.05
VAMP1-206ENST00000538970 LYPD1Q8N2G4 141 aa8.52□□□□□ -1.05
VAMP1-206ENST00000538970 ENKURQ8TC29 256 aa8.52□□□□□ -1.05
VAMP1-206ENST00000538970 MDFICQ9P1T7 246 aa8.52□□□□□ -1.05
VAMP1-206ENST00000538970 SFTA3P0C7M3 94 aa8.51□□□□□ -1.05
VAMP1-206ENST00000538970 NEGR1Q7Z3B1 354 aa8.51□□□□□ -1.05
VAMP1-206ENST00000538970 OR10G4Q8NGN3 311 aa8.51□□□□□ -1.05
VAMP1-206ENST00000538970 S100ZQ8WXG8 99 aa8.51□□□□□ -1.05
VAMP1-206ENST00000538970 ZNF479Q96JC4 524 aa8.51□□□□□ -1.05
VAMP1-206ENST00000538970 ATP5SQ99766 215 aa8.51□□□□□ -1.05
VAMP1-206ENST00000538970 PGPEP1Q9NXJ5 209 aa8.51□□□□□ -1.05
VAMP1-206ENST00000538970 LENEPQ9Y5L5 61 aa8.51□□□□□ -1.05
VAMP1-206ENST00000538970 TNFRSF18Q9Y5U5 241 aa8.51□□□□□ -1.05
VAMP1-206ENST00000538970 TRGV4A0A0C4DH28 118 aa8.5□□□□□ -1.05
VAMP1-206ENST00000538970 DIRC3C9JPN6 131 aa8.5□□□□□ -1.05
VAMP1-206ENST00000538970 K7EQD1 137 aa8.5□□□□□ -1.05
VAMP1-206ENST00000538970 EREGO14944 169 aa8.5□□□□□ -1.05
VAMP1-206ENST00000538970 SRIP30626 198 aa8.5□□□□□ -1.05
VAMP1-206ENST00000538970 FUSP35637 526 aaKnown RBP eCLIP8.5□□□□□ -1.05
VAMP1-206ENST00000538970 H2BFSP57053 126 aa8.5□□□□□ -1.05
VAMP1-206ENST00000538970 CYCSP99999 105 aaKnown RBP8.5□□□□□ -1.05
VAMP1-206ENST00000538970 TMEM183BQ1AE95 376 aa8.5□□□□□ -1.05
VAMP1-206ENST00000538970 KHDC3LQ587J8 217 aa8.5□□□□□ -1.05
VAMP1-206ENST00000538970 CDPF1Q6NVV7 123 aa8.5□□□□□ -1.05
VAMP1-206ENST00000538970 NFE4Q86UQ8 179 aa8.5□□□□□ -1.05
VAMP1-206ENST00000538970 WFDC10BQ8IUB3 73 aa8.5□□□□□ -1.05
VAMP1-206ENST00000538970 IQCF2Q8IXL9 164 aa8.5□□□□□ -1.05
VAMP1-206ENST00000538970 TMEM183AQ8IXX5 376 aa8.5□□□□□ -1.05
VAMP1-206ENST00000538970 RASL10AQ92737 203 aa8.5□□□□□ -1.05
VAMP1-206ENST00000538970 LY96Q9Y6Y9 160 aa8.5□□□□□ -1.05
VAMP1-206ENST00000538970 MYCBP2O75592 4640 aa8.5□□□□□ -1.05
VAMP1-206ENST00000538970 TRGV11A0A075B6L2 103 aa8.49□□□□□ -1.05
VAMP1-206ENST00000538970 UPK1BO75841 260 aa8.49□□□□□ -1.05
VAMP1-206ENST00000538970 DNAH10OSP0CZ25 163 aa8.49□□□□□ -1.05
VAMP1-206ENST00000538970 FFAR4Q5NUL3 377 aa8.49□□□□□ -1.05
VAMP1-206ENST00000538970 FAM159AQ6UWV7 190 aa8.49□□□□□ -1.05
VAMP1-206ENST00000538970 PPP1R1CQ8WVI7 109 aa8.49□□□□□ -1.05
VAMP1-206ENST00000538970 TMED6Q8WW62 240 aa8.49□□□□□ -1.05
VAMP1-206ENST00000538970 SPXQ9BT56 116 aa8.49□□□□□ -1.05
VAMP1-206ENST00000538970 HSPB11Q9Y547 144 aa8.49□□□□□ -1.05
VAMP1-206ENST00000538970 TRAV9-2A0A087WT02 112 aa8.48□□□□□ -1.05
VAMP1-206ENST00000538970 A0A087WTM6 91 aa8.48□□□□□ -1.05
VAMP1-206ENST00000538970 INMT-MINDY4F8WBC2 141 aa8.48□□□□□ -1.05
VAMP1-206ENST00000538970 K7EP13 123 aa8.48□□□□□ -1.05
VAMP1-206ENST00000538970 ORM1P02763 201 aa8.48□□□□□ -1.05
VAMP1-206ENST00000538970 INAFM2P0DMQ5 153 aa8.48□□□□□ -1.05
VAMP1-206ENST00000538970 GYPEP15421 78 aa8.48□□□□□ -1.05
VAMP1-206ENST00000538970 TAS2R45P59539 299 aa8.48□□□□□ -1.05
VAMP1-206ENST00000538970 IFITM3Q01628 133 aa8.48□□□□□ -1.05
VAMP1-206ENST00000538970 TDRG1Q3Y452 100 aa8.48□□□□□ -1.05
VAMP1-206ENST00000538970 PCNPQ8WW12 178 aaKnown RBP8.48□□□□□ -1.05
VAMP1-206ENST00000538970 PTTG2Q9NZH5 202 aa8.48□□□□□ -1.05
VAMP1-206ENST00000538970 TRAV4A0A0B4J268 109 aa8.47□□□□□ -1.05
VAMP1-206ENST00000538970 EPM2AB3EWF7 344 aa8.47□□□□□ -1.05
VAMP1-206ENST00000538970 EIF3GO75821 320 aaKnown RBP eCLIP8.47□□□□□ -1.05
VAMP1-206ENST00000538970 MPC2O95563 127 aa8.47□□□□□ -1.05
VAMP1-206ENST00000538970 PET100P0DJ07 73 aa8.47□□□□□ -1.05
VAMP1-206ENST00000538970 HYLS1Q96M11 299 aa8.47□□□□□ -1.05
VAMP1-206ENST00000538970 SMIM3Q9BZL3 60 aa8.47□□□□□ -1.05
VAMP1-206ENST00000538970 OTORQ9NRC9 128 aa8.47□□□□□ -1.05
VAMP1-206ENST00000538970 MSRB1Q9NZV6 116 aa8.47□□□□□ -1.05
VAMP1-206ENST00000538970 NAGKQ9UJ70 344 aa8.47□□□□□ -1.05
VAMP1-206ENST00000538970 RPH3ALQ9UNE2 315 aa8.47□□□□□ -1.05
VAMP1-206ENST00000538970 IGHV3-16A0A0C4DH30 117 aa8.46□□□□□ -1.06
VAMP1-206ENST00000538970 C9JCJ5 164 aa8.46□□□□□ -1.06
VAMP1-206ENST00000538970 IFNA5P01569 189 aa8.46□□□□□ -1.06
VAMP1-206ENST00000538970 EVI2AP22794 236 aa8.46□□□□□ -1.06
VAMP1-206ENST00000538970 RPL12P30050 165 aaKnown RBP8.46□□□□□ -1.06
VAMP1-206ENST00000538970 XGP55808 180 aa8.46□□□□□ -1.06
VAMP1-206ENST00000538970 CMTM2Q8TAZ6 248 aa8.46□□□□□ -1.06
VAMP1-206ENST00000538970 SCGB1C1Q8TD33 95 aa8.46□□□□□ -1.06
VAMP1-206ENST00000538970 TXNDC17Q9BRA2 123 aa8.46□□□□□ -1.06
VAMP1-206ENST00000538970 MARVELD1Q9BSK0 173 aa8.46□□□□□ -1.06
VAMP1-206ENST00000538970 TRAV21A0A0B4J279 112 aa8.45□□□□□ -1.06
VAMP1-206ENST00000538970 LOC100131303A0A0U1RQF7 123 aa8.45□□□□□ -1.06
VAMP1-206ENST00000538970 PGPA6NDG6 321 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms