RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 ATP6V0E2Q8NHE4 81 aa14.45□□□□□ -0.1
SFSWAP-207ENST00000538548 RPEQ96AT9 228 aa14.45□□□□□ -0.1
SFSWAP-207ENST00000538548 FOXI1Q12951 378 aa14.44□□□□□ -0.1
SFSWAP-207ENST00000538548 GFRALQ6UXV0 394 aa14.44□□□□□ -0.1
SFSWAP-207ENST00000538548 C20orf78Q9BR46 151 aa14.44□□□□□ -0.1
SFSWAP-207ENST00000538548 LAGE3Q14657 143 aa14.44□□□□□ -0.1
SFSWAP-207ENST00000538548 C1QTNF4Q9BXJ3 329 aa14.44□□□□□ -0.1
SFSWAP-207ENST00000538548 GEMIN7Q9H840 131 aaKnown RBP14.44□□□□□ -0.1
SFSWAP-207ENST00000538548 SH3BGRL2Q9UJC5 107 aa14.44□□□□□ -0.1
SFSWAP-207ENST00000538548 WFDC12Q8WWY7 111 aa14.43□□□□□ -0.1
SFSWAP-207ENST00000538548 PRSS47A8MTI9 375 aa14.43□□□□□ -0.1
SFSWAP-207ENST00000538548 CRYBA4P53673 196 aa14.43□□□□□ -0.1
SFSWAP-207ENST00000538548 S4R3C0 116 aa14.43□□□□□ -0.1
SFSWAP-207ENST00000538548 NBL1P41271 181 aa14.42□□□□□ -0.1
SFSWAP-207ENST00000538548 PRB3Q04118 309 aaPredicted RBP14.42□□□□□ -0.1
SFSWAP-207ENST00000538548 ZNF48Q96MX3 618 aaPredicted RBP14.42□□□□□ -0.1
SFSWAP-207ENST00000538548 IGHG4P01861 327 aa14.42□□□□□ -0.1
SFSWAP-207ENST00000538548 KLRD1Q13241 179 aa14.42□□□□□ -0.1
SFSWAP-207ENST00000538548 MORN3Q6PF18 240 aaPredicted RBP14.42□□□□□ -0.1
SFSWAP-207ENST00000538548 C8orf86Q6ZUL3 223 aa14.42□□□□□ -0.1
SFSWAP-207ENST00000538548 NDUFA3O95167 84 aa14.41□□□□□ -0.1
SFSWAP-207ENST00000538548 MFAP4P55083 255 aa14.41□□□□□ -0.1
SFSWAP-207ENST00000538548 CFAP126Q5VTH2 177 aa14.41□□□□□ -0.1
SFSWAP-207ENST00000538548 SYT8Q8NBV8 401 aa14.41□□□□□ -0.1
SFSWAP-207ENST00000538548 ZNF418Q8TF45 676 aaPredicted RBP14.41□□□□□ -0.1
SFSWAP-207ENST00000538548 CYSLTR1Q9Y271 337 aa14.41□□□□□ -0.1
SFSWAP-207ENST00000538548 PTPRQQ9UMZ3 2332 aa14.41□□□□□ -0.1
SFSWAP-207ENST00000538548 HOXA3O43365 443 aaPredicted RBP14.41□□□□□ -0.1
SFSWAP-207ENST00000538548 CDIP1Q9H305 208 aa14.41□□□□□ -0.1
SFSWAP-207ENST00000538548 MYMXA0A1B0GTQ4 84 aa14.4□□□□□ -0.1
SFSWAP-207ENST00000538548 OR11H12B2RN74 326 aa14.4□□□□□ -0.1
SFSWAP-207ENST00000538548 OR11H1Q8NG94 326 aa14.4□□□□□ -0.1
SFSWAP-207ENST00000538548 OR11H2Q8NH07 326 aa14.4□□□□□ -0.1
SFSWAP-207ENST00000538548 TRAV12-1A0A0B4J245 112 aa14.39□□□□□ -0.11
SFSWAP-207ENST00000538548 F8VRH5 84 aa14.39□□□□□ -0.11
SFSWAP-207ENST00000538548 ZNF672Q499Z4 452 aaPredicted RBP14.39□□□□□ -0.11
SFSWAP-207ENST00000538548 IL17RELQ6ZVW7 336 aa14.39□□□□□ -0.11
SFSWAP-207ENST00000538548 NRACQ8N912 160 aa14.39□□□□□ -0.11
SFSWAP-207ENST00000538548 DLX4Q92988 240 aaPredicted RBP14.39□□□□□ -0.11
SFSWAP-207ENST00000538548 H7C1H1 209 aa14.39□□□□□ -0.11
SFSWAP-207ENST00000538548 PPIFP30405 207 aaKnown RBP14.39□□□□□ -0.11
SFSWAP-207ENST00000538548 IGFL4Q6B9Z1 124 aa14.39□□□□□ -0.11
SFSWAP-207ENST00000538548 PGPEP1Q9NXJ5 209 aa14.39□□□□□ -0.11
SFSWAP-207ENST00000538548 PKDREJQ9NTG1 2253 aa14.39□□□□□ -0.11
SFSWAP-207ENST00000538548 F8W735 103 aaPredicted RBP14.38□□□□□ -0.11
SFSWAP-207ENST00000538548 SPINK8P0C7L1 97 aa14.38□□□□□ -0.11
SFSWAP-207ENST00000538548 COX7A1P24310 79 aa14.38□□□□□ -0.11
SFSWAP-207ENST00000538548 HLA-DMBP28068 263 aa14.38□□□□□ -0.11
SFSWAP-207ENST00000538548 LCNL1Q6ZST4 164 aa14.38□□□□□ -0.11
SFSWAP-207ENST00000538548 RALYQ9UKM9 306 aaKnown RBP14.38□□□□□ -0.11
SFSWAP-207ENST00000538548 SMAD5-AS1Q9Y6J3 95 aa14.38□□□□□ -0.11
SFSWAP-207ENST00000538548 ZGRF1Q86YA3 2104 aa14.38□□□□□ -0.11
SFSWAP-207ENST00000538548 FOXC1Q12948 553 aa14.38□□□□□ -0.11
SFSWAP-207ENST00000538548 COL12A1Q99715 3063 aa14.38□□□□□ -0.11
SFSWAP-207ENST00000538548 IGLV11-55A0A075B6I3 123 aa14.37□□□□□ -0.11
SFSWAP-207ENST00000538548 TRGV3P03979 118 aa14.37□□□□□ -0.11
SFSWAP-207ENST00000538548 SMCPP49901 116 aaPredicted RBP14.37□□□□□ -0.11
SFSWAP-207ENST00000538548 BSPH1Q075Z2 132 aa14.37□□□□□ -0.11
SFSWAP-207ENST00000538548 FANCD2OSQ96PS1 177 aa14.37□□□□□ -0.11
SFSWAP-207ENST00000538548 EFNA4P52798 201 aa14.37□□□□□ -0.11
SFSWAP-207ENST00000538548 LY6LH3BQJ8 138 aa14.36□□□□□ -0.11
SFSWAP-207ENST00000538548 NBR2O15453 112 aa14.36□□□□□ -0.11
SFSWAP-207ENST00000538548 DYNAPQ8N1N2 210 aa14.36□□□□□ -0.11
SFSWAP-207ENST00000538548 TIMM23O14925 209 aa14.36□□□□□ -0.11
SFSWAP-207ENST00000538548 NFE4Q86UQ8 179 aa14.36□□□□□ -0.11
SFSWAP-207ENST00000538548 CFHR4Q92496 578 aa14.36□□□□□ -0.11
SFSWAP-207ENST00000538548 RNASE6Q93091 150 aaKnown RBP14.36□□□□□ -0.11
SFSWAP-207ENST00000538548 C21orf62Q9NYP8 219 aa14.36□□□□□ -0.11
SFSWAP-207ENST00000538548 A6NJY4 79 aa14.35□□□□□ -0.11
SFSWAP-207ENST00000538548 PIEZO1Q92508 2521 aa14.35□□□□□ -0.11
SFSWAP-207ENST00000538548 IGKV3D-20A0A0C4DH25 116 aa14.35□□□□□ -0.11
SFSWAP-207ENST00000538548 LGALS1P09382 135 aaKnown RBP14.35□□□□□ -0.11
SFSWAP-207ENST00000538548 ERCC8Q13216 396 aa14.35□□□□□ -0.11
SFSWAP-207ENST00000538548 TRAV26-2A0A0B4J265 109 aa14.34□□□□□ -0.11
SFSWAP-207ENST00000538548 MT-ATP8P03928 68 aa14.34□□□□□ -0.11
SFSWAP-207ENST00000538548 Q6ZUT4 128 aa14.34□□□□□ -0.11
SFSWAP-207ENST00000538548 RBAKDNA6NC62 111 aa14.33□□□□□ -0.12
SFSWAP-207ENST00000538548 DYNLRB1Q9NP97 96 aa14.33□□□□□ -0.12
SFSWAP-207ENST00000538548 UFC1Q9Y3C8 167 aa14.33□□□□□ -0.12
SFSWAP-207ENST00000538548 FHL3Q13643 280 aa14.32□□□□□ -0.12
SFSWAP-207ENST00000538548 TMEM78Q5T7P6 136 aa14.32□□□□□ -0.12
SFSWAP-207ENST00000538548 IGFBPL1Q8WX77 278 aa14.32□□□□□ -0.12
SFSWAP-207ENST00000538548 RAXQ9Y2V3 346 aa14.32□□□□□ -0.12
SFSWAP-207ENST00000538548 LINC01549A6NIU2 74 aa14.32□□□□□ -0.12
SFSWAP-207ENST00000538548 PRAC2D3DTV9 90 aa14.32□□□□□ -0.12
SFSWAP-207ENST00000538548 SCGB2A1O75556 95 aa14.32□□□□□ -0.12
SFSWAP-207ENST00000538548 UBE2D1P51668 147 aa14.32□□□□□ -0.12
SFSWAP-207ENST00000538548 XGP55808 180 aa14.32□□□□□ -0.12
SFSWAP-207ENST00000538548 NPBQ8NG41 125 aa14.32□□□□□ -0.12
SFSWAP-207ENST00000538548 OR11H6Q8NGC7 330 aa14.31□□□□□ -0.12
SFSWAP-207ENST00000538548 C11orf21Q9P2W6 132 aa14.31□□□□□ -0.12
SFSWAP-207ENST00000538548 IGHV7-4-1A0A0J9YVY3 117 aa14.31□□□□□ -0.12
SFSWAP-207ENST00000538548 PPDPFLQ8WWR9 84 aa14.31□□□□□ -0.12
SFSWAP-207ENST00000538548 SMIM2Q9BVW6 85 aa14.31□□□□□ -0.12
SFSWAP-207ENST00000538548 VCX2Q9H322 139 aa14.31□□□□□ -0.12
SFSWAP-207ENST00000538548 TSPAN13O95857 204 aa14.3□□□□□ -0.12
SFSWAP-207ENST00000538548 PSMB2P49721 201 aa14.3□□□□□ -0.12
SFSWAP-207ENST00000538548 UBE2D3P61077 147 aa14.3□□□□□ -0.12
SFSWAP-207ENST00000538548 UBE2D2P62837 147 aa14.3□□□□□ -0.12
SFSWAP-207ENST00000538548 LYRM7Q5U5X0 104 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms