RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 CECR9P0C854 216 aa5.19□□□□□ -1.58
USP28-207ENST00000538475 CD59P13987 128 aa5.19□□□□□ -1.58
USP28-207ENST00000538475 RPL7P18124 248 aaKnown RBP5.19□□□□□ -1.58
USP28-207ENST00000538475 LYZP61626 148 aa5.19□□□□□ -1.58
USP28-207ENST00000538475 FAM201AQ5SY85 155 aa5.19□□□□□ -1.58
USP28-207ENST00000538475 SPINK14Q6IE38 97 aa5.19□□□□□ -1.58
USP28-207ENST00000538475 ASCL5Q7RTU5 278 aa5.19□□□□□ -1.58
USP28-207ENST00000538475 NDUFA11Q86Y39 141 aa5.19□□□□□ -1.58
USP28-207ENST00000538475 EXOC3-AS1Q8N2X6 119 aa5.19□□□□□ -1.58
USP28-207ENST00000538475 C10orf126Q8N4M7 172 aa5.19□□□□□ -1.58
USP28-207ENST00000538475 IL17DQ8TAD2 202 aa5.19□□□□□ -1.58
USP28-207ENST00000538475 SLC50A1Q9BRV3 221 aa5.19□□□□□ -1.58
USP28-207ENST00000538475 LOC107984156A0A0G2JMH3 177 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 E7EUB6 86 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 J3KRW8 73 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 M0R381 172 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 ZNHIT1O43257 154 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 SLC25A20O43772 301 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 ACYP1P07311 99 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 SRSF9Q13242 221 aaKnown RBP eCLIP5.18□□□□□ -1.58
USP28-207ENST00000538475 FHL3Q13643 280 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 MRGPRG-AS1Q2M3A8 158 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 SPRNQ5BIV9 151 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 DEFB121Q5J5C9 76 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 ARL17AQ8IVW1 177 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 NEXN-AS1Q8NBZ9 246 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 LEAP2Q969E1 77 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 TOMM6Q96B49 74 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 MRPL53Q96EL3 112 aaKnown RBP5.18□□□□□ -1.58
USP28-207ENST00000538475 RNF125Q96EQ8 232 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 TPPP3Q9BW30 176 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 ONECUT1Q9UBC0 465 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 PRO1854Q9UHT4 67 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 FZR1Q9UM11 496 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 SELENOKQ9Y6D0 94 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 ZGRF1Q86YA3 2104 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 SVILO95425 2214 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 ARFGEF3Q5TH69 2177 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 IGHV3OR15-7A0A075B7D8 119 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.17□□□□□ -1.58
USP28-207ENST00000538475 A0A0B4J2C4 111 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 TRBV7-7A0A0K0K1E9 115 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 TCL1BO95988 128 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 IGKV1-17P01599 117 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 EGR2P11161 476 aaPredicted RBP5.17□□□□□ -1.58
USP28-207ENST00000538475 COX6B1P14854 86 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 GATA3P23771 443 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 RPS28P62857 69 aaKnown RBP5.17□□□□□ -1.58
USP28-207ENST00000538475 ATXN8Q156A1 80 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 C5orf47Q569G3 176 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 Q71RC1 249 aaPredicted RBP5.17□□□□□ -1.58
USP28-207ENST00000538475 TDHQ8IZJ6 230 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 SMIM20Q8N5G0 67 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 ANKRD29Q8N6D5 301 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 ZNF491Q8N8L2 437 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 SLC25A29Q8N8R3 303 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 NRACQ8N912 160 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 DNAJC30Q96LL9 226 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 SMIM2Q9BVW6 85 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 SPRY4Q9C004 299 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 YAE1D1Q9NRH1 226 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 ABCA1O95477 2261 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 TRAV8-4A0A0B4J246 113 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 IGHV1-18A0A0C4DH31 117 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 IGHV3-64DA0A0J9YX35 117 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 A0A1B0GX51 115 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 KRTAP23-1A1A580 65 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 ZNF815PA8K554 130 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 H3BT86 120 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 LYZL6O75951 148 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 TFF1P04155 84 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 CCL4P13236 92 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 ERCC8Q13216 396 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 SCGB1D4Q6XE38 83 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 DTX2Q86UW9 622 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 LRRC75A-AS1Q8N1F1 130 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 NRGNQ92686 78 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 TIMD4Q96H15 378 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 SCGB3A1Q96QR1 104 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 PRADC1Q9BSG0 188 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 TTTY13Q9BZ97 58 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 SIGLEC9Q9Y336 463 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 LENEPQ9Y5L5 61 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 TRAV8-2A0A0B4J237 113 aa5.15□□□□□ -1.59
USP28-207ENST00000538475 A0A0J9YX75 114 aa5.15□□□□□ -1.59
USP28-207ENST00000538475 A0A0J9YY99 117 aa5.15□□□□□ -1.59
USP28-207ENST00000538475 TRBV30A0A0K0K1B3 111 aa5.15□□□□□ -1.59
USP28-207ENST00000538475 TRBV10-2A0A0K0K1G8 114 aa5.15□□□□□ -1.59
USP28-207ENST00000538475 EPOPA6NHQ4 379 aa5.15□□□□□ -1.59
USP28-207ENST00000538475 TEX22C9J3V5 150 aa5.15□□□□□ -1.59
USP28-207ENST00000538475 SMKR1H3BMG3 65 aa5.15□□□□□ -1.59
USP28-207ENST00000538475 SLPIP03973 132 aa5.15□□□□□ -1.59
USP28-207ENST00000538475 PRTN3P24158 256 aa5.15□□□□□ -1.59
USP28-207ENST00000538475 PPIFP30405 207 aaKnown RBP5.15□□□□□ -1.59
USP28-207ENST00000538475 CXCL12P48061 93 aa5.15□□□□□ -1.59
USP28-207ENST00000538475 TNFAIP6P98066 277 aaPredicted RBP5.15□□□□□ -1.59
USP28-207ENST00000538475 TMEM170BQ5T4T1 132 aa5.15□□□□□ -1.59
USP28-207ENST00000538475 RASL10AQ92737 203 aa5.15□□□□□ -1.59
USP28-207ENST00000538475 PTH2Q96A98 100 aa5.15□□□□□ -1.59
USP28-207ENST00000538475 TMEM141Q96I45 108 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms