RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 WT1-ASQ06250 92 aa6.62□□□□□ -1.35
SRGAP1-202ENST00000537556 ORMDL2Q53FV1 153 aa6.62□□□□□ -1.35
SRGAP1-202ENST00000537556 TMEM240Q5SV17 173 aa6.62□□□□□ -1.35
SRGAP1-202ENST00000537556 NEXN-AS1Q8NBZ9 246 aa6.62□□□□□ -1.35
SRGAP1-202ENST00000537556 METTL26Q96S19 204 aa6.62□□□□□ -1.35
SRGAP1-202ENST00000537556 CXXC4Q9H2H0 198 aa6.62□□□□□ -1.35
SRGAP1-202ENST00000537556 IGHV1OR21-1A0A087WYE8 117 aa6.62□□□□□ -1.35
SRGAP1-202ENST00000537556 ATOX1O00244 68 aa6.62□□□□□ -1.35
SRGAP1-202ENST00000537556 GAS8-AS1O95177 125 aa6.62□□□□□ -1.35
SRGAP1-202ENST00000537556 MALP21145 153 aa6.62□□□□□ -1.35
SRGAP1-202ENST00000537556 LEAP2Q969E1 77 aa6.62□□□□□ -1.35
SRGAP1-202ENST00000537556 TRBV30A0A0K0K1B3 111 aa6.61□□□□□ -1.35
SRGAP1-202ENST00000537556 CD40P25942 277 aa6.61□□□□□ -1.35
SRGAP1-202ENST00000537556 CNTFRP26992 372 aa6.61□□□□□ -1.35
SRGAP1-202ENST00000537556 SRSF2Q01130 221 aaKnown RBP6.61□□□□□ -1.35
SRGAP1-202ENST00000537556 COX8CQ7Z4L0 72 aa6.61□□□□□ -1.35
SRGAP1-202ENST00000537556 CD177Q8N6Q3 437 aa6.61□□□□□ -1.35
SRGAP1-202ENST00000537556 KLHL30-AS1Q8NEE0 82 aa6.61□□□□□ -1.35
SRGAP1-202ENST00000537556 PLA2G2FQ9BZM2 168 aa6.61□□□□□ -1.35
SRGAP1-202ENST00000537556 INTS1Q8N201 2190 aaKnown RBP6.61□□□□□ -1.35
SRGAP1-202ENST00000537556 VCANP13611 3396 aa6.61□□□□□ -1.35
SRGAP1-202ENST00000537556 CEP290O15078 2479 aa6.61□□□□□ -1.35
SRGAP1-202ENST00000537556 H7C2G1 150 aa6.61□□□□□ -1.35
SRGAP1-202ENST00000537556 EGR2P11161 476 aaPredicted RBP6.61□□□□□ -1.35
SRGAP1-202ENST00000537556 LYZP61626 148 aa6.61□□□□□ -1.35
SRGAP1-202ENST00000537556 SIGLEC15Q6ZMC9 328 aa6.61□□□□□ -1.35
SRGAP1-202ENST00000537556 MSRB1Q9NZV6 116 aa6.61□□□□□ -1.35
SRGAP1-202ENST00000537556 A0A1W2PPC4 97 aa6.6□□□□□ -1.35
SRGAP1-202ENST00000537556 COX6CP09669 75 aa6.6□□□□□ -1.35
SRGAP1-202ENST00000537556 GATA1P15976 413 aaPredicted RBP6.6□□□□□ -1.35
SRGAP1-202ENST00000537556 DEFB133Q30KQ1 61 aa6.6□□□□□ -1.35
SRGAP1-202ENST00000537556 TMEM263Q8WUH6 116 aaKnown RBP6.6□□□□□ -1.35
SRGAP1-202ENST00000537556 J3QLI3 93 aa6.6□□□□□ -1.35
SRGAP1-202ENST00000537556 hADV29S1A0JD25 119 aa6.6□□□□□ -1.35
SRGAP1-202ENST00000537556 H7C423 109 aa6.6□□□□□ -1.35
SRGAP1-202ENST00000537556 CFHR1Q03591 330 aa6.6□□□□□ -1.35
SRGAP1-202ENST00000537556 ZNF672Q499Z4 452 aaPredicted RBP6.6□□□□□ -1.35
SRGAP1-202ENST00000537556 TMEM167AQ8TBQ9 72 aa6.6□□□□□ -1.35
SRGAP1-202ENST00000537556 TOMM6Q96B49 74 aa6.6□□□□□ -1.35
SRGAP1-202ENST00000537556 TRIOBPQ9H2D6 2365 aa6.59□□□□□ -1.35
SRGAP1-202ENST00000537556 ZNF22P17026 224 aaPredicted RBP6.59□□□□□ -1.35
SRGAP1-202ENST00000537556 Q5XG85 94 aa6.59□□□□□ -1.35
SRGAP1-202ENST00000537556 JPT2Q9H910 190 aa6.59□□□□□ -1.35
SRGAP1-202ENST00000537556 PCNX2A6NKB5 2137 aa6.59□□□□□ -1.35
SRGAP1-202ENST00000537556 LAMA2P24043 3122 aaKnown RBP6.59□□□□□ -1.35
SRGAP1-202ENST00000537556 A0A0G2JNJ9 132 aa6.59□□□□□ -1.35
SRGAP1-202ENST00000537556 E7EUB6 86 aa6.59□□□□□ -1.35
SRGAP1-202ENST00000537556 SCRG1O75711 98 aa6.59□□□□□ -1.35
SRGAP1-202ENST00000537556 COX6A1P12074 109 aa6.59□□□□□ -1.35
SRGAP1-202ENST00000537556 GATA4P43694 442 aa6.59□□□□□ -1.35
SRGAP1-202ENST00000537556 C2orf48Q96LS8 159 aa6.59□□□□□ -1.35
SRGAP1-202ENST00000537556 C1orf43Q9BWL3 253 aa6.59□□□□□ -1.35
SRGAP1-202ENST00000537556 Q9UFV3 132 aa6.59□□□□□ -1.35
SRGAP1-202ENST00000537556 TRAV13-1A0A0B4J241 112 aa6.58□□□□□ -1.36
SRGAP1-202ENST00000537556 C17orf100A8MU93 164 aa6.58□□□□□ -1.36
SRGAP1-202ENST00000537556 LMO7DNF2Z398 122 aa6.58□□□□□ -1.36
SRGAP1-202ENST00000537556 MRPL14Q6P1L8 145 aaKnown RBP6.58□□□□□ -1.36
SRGAP1-202ENST00000537556 Q6ZS46 218 aa6.58□□□□□ -1.36
SRGAP1-202ENST00000537556 IL17RELQ6ZVW7 336 aa6.58□□□□□ -1.36
SRGAP1-202ENST00000537556 DOCK7Q96N67 2140 aa6.58□□□□□ -1.36
SRGAP1-202ENST00000537556 TINCRA0A1B0GVN0 87 aa6.58□□□□□ -1.36
SRGAP1-202ENST00000537556 M0R3E3 92 aa6.58□□□□□ -1.36
SRGAP1-202ENST00000537556 CGB3P0DN86 165 aa6.58□□□□□ -1.36
SRGAP1-202ENST00000537556 CGB7P0DN87 165 aa6.58□□□□□ -1.36
SRGAP1-202ENST00000537556 PDE6HQ13956 83 aa6.58□□□□□ -1.36
SRGAP1-202ENST00000537556 PCOLCEQ15113 449 aa6.58□□□□□ -1.36
SRGAP1-202ENST00000537556 TMEM30BQ3MIR4 351 aa6.58□□□□□ -1.36
SRGAP1-202ENST00000537556 C3orf36Q3SXR2 165 aa6.58□□□□□ -1.36
SRGAP1-202ENST00000537556 NRACQ8N912 160 aa6.58□□□□□ -1.36
SRGAP1-202ENST00000537556 BEX4Q9NWD9 120 aaPredicted RBP6.58□□□□□ -1.36
SRGAP1-202ENST00000537556 CTSZQ9UBR2 303 aa6.58□□□□□ -1.36
SRGAP1-202ENST00000537556 NXPH1P58417 271 aa6.57□□□□□ -1.36
SRGAP1-202ENST00000537556 SEC61GP60059 68 aa6.57□□□□□ -1.36
SRGAP1-202ENST00000537556 C17orf58Q2M2W7 97 aa6.57□□□□□ -1.36
SRGAP1-202ENST00000537556 C5orf38Q86SI9 138 aa6.57□□□□□ -1.36
SRGAP1-202ENST00000537556 DEFB123Q8N688 67 aa6.57□□□□□ -1.36
SRGAP1-202ENST00000537556 C17orf77Q96MU5 243 aa6.57□□□□□ -1.36
SRGAP1-202ENST00000537556 KLK15Q9H2R5 256 aa6.57□□□□□ -1.36
SRGAP1-202ENST00000537556 C10orf142B7Z368 130 aa6.57□□□□□ -1.36
SRGAP1-202ENST00000537556 ELANEP08246 267 aa6.57□□□□□ -1.36
SRGAP1-202ENST00000537556 MRPS21P82921 87 aaKnown RBP6.57□□□□□ -1.36
SRGAP1-202ENST00000537556 KLF14Q8TD94 323 aaPredicted RBP6.57□□□□□ -1.36
SRGAP1-202ENST00000537556 SHANK2-AS3Q9BTD1 123 aa6.57□□□□□ -1.36
SRGAP1-202ENST00000537556 SMIM2Q9BVW6 85 aa6.57□□□□□ -1.36
SRGAP1-202ENST00000537556 SIT1Q9Y3P8 196 aa6.57□□□□□ -1.36
SRGAP1-202ENST00000537556 FREM1Q5H8C1 2179 aa6.57□□□□□ -1.36
SRGAP1-202ENST00000537556 COL6A3P12111 3177 aa6.57□□□□□ -1.36
SRGAP1-202ENST00000537556 C5orf42Q9H799 3197 aa6.57□□□□□ -1.36
SRGAP1-202ENST00000537556 BRWD1Q9NSI6 2320 aa6.57□□□□□ -1.36
SRGAP1-202ENST00000537556 IGKV1D-17A0A075B6S4 117 aa6.57□□□□□ -1.36
SRGAP1-202ENST00000537556 CGB1A6NKQ9 187 aa6.57□□□□□ -1.36
SRGAP1-202ENST00000537556 ERCC8Q13216 396 aa6.57□□□□□ -1.36
SRGAP1-202ENST00000537556 GUSBP11Q6P575 273 aa6.57□□□□□ -1.36
SRGAP1-202ENST00000537556 FSCN3Q9NQT6 498 aa6.57□□□□□ -1.36
SRGAP1-202ENST00000537556 PYGO1Q9Y3Y4 419 aa6.57□□□□□ -1.36
SRGAP1-202ENST00000537556 F5P12259 2224 aa6.56□□□□□ -1.36
SRGAP1-202ENST00000537556 TRIAP1O43715 76 aa6.56□□□□□ -1.36
SRGAP1-202ENST00000537556 RFPL3SP0C7P2 107 aa6.56□□□□□ -1.36
SRGAP1-202ENST00000537556 C8orf31Q8N9H6 132 aa6.56□□□□□ -1.36
SRGAP1-202ENST00000537556 CFHR4Q92496 578 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms