RNA–Protein interactions for RNA: ENST00000535835.5

SPARCL1-208, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-208ENST00000535835 IGHV1-69DA0A0B4J2H0 117 aa2.34□□□□□ -2.03
SPARCL1-208ENST00000535835 TRBV10-2A0A0K0K1G8 114 aa2.34□□□□□ -2.03
SPARCL1-208ENST00000535835 A0A1B0GWA3 101 aa2.34□□□□□ -2.03
SPARCL1-208ENST00000535835 C19orf71A6NCJ1 209 aa2.34□□□□□ -2.03
SPARCL1-208ENST00000535835 EPOPA6NHQ4 379 aa2.34□□□□□ -2.03
SPARCL1-208ENST00000535835 SNURFLB1AK76 121 aa2.34□□□□□ -2.03
SPARCL1-208ENST00000535835 C9JCJ5 164 aa2.34□□□□□ -2.03
SPARCL1-208ENST00000535835 COX7A2P2O60397 106 aa2.34□□□□□ -2.03
SPARCL1-208ENST00000535835 IGKV1-5P01602 117 aa2.34□□□□□ -2.03
SPARCL1-208ENST00000535835 SAA1P0DJI8 122 aaPredicted RBP2.34□□□□□ -2.03
SPARCL1-208ENST00000535835 UBE2AP49459 152 aa2.34□□□□□ -2.03
SPARCL1-208ENST00000535835 FXYD2P54710 66 aa2.34□□□□□ -2.03
SPARCL1-208ENST00000535835 ZNF56Q15929 161 aa2.34□□□□□ -2.03
SPARCL1-208ENST00000535835 C1orf100Q5SVJ3 147 aa2.34□□□□□ -2.03
SPARCL1-208ENST00000535835 GUSBP11Q6P575 273 aa2.34□□□□□ -2.03
SPARCL1-208ENST00000535835 SCXQ7RTU7 201 aa2.34□□□□□ -2.03
SPARCL1-208ENST00000535835 GPHB5Q86YW7 130 aa2.34□□□□□ -2.03
SPARCL1-208ENST00000535835 CD177Q8N6Q3 437 aa2.34□□□□□ -2.03
SPARCL1-208ENST00000535835 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.34□□□□□ -2.03
SPARCL1-208ENST00000535835 C3orf56Q8N813 242 aa2.34□□□□□ -2.03
SPARCL1-208ENST00000535835 FXYD5Q96DB9 178 aa2.34□□□□□ -2.03
SPARCL1-208ENST00000535835 RMI2Q96E14 147 aa2.34□□□□□ -2.03
SPARCL1-208ENST00000535835 ZNF714Q96N38 554 aa2.34□□□□□ -2.03
SPARCL1-208ENST00000535835 SLC50A1Q9BRV3 221 aa2.34□□□□□ -2.03
SPARCL1-208ENST00000535835 ZNF702PQ9H963 129 aa2.34□□□□□ -2.03
SPARCL1-208ENST00000535835 EPDR1Q9UM22 224 aa2.34□□□□□ -2.03
SPARCL1-208ENST00000535835 TIMM9Q9Y5J7 89 aa2.34□□□□□ -2.03
SPARCL1-208ENST00000535835 MED1Q15648 1581 aaPredicted RBP2.34□□□□□ -2.03
SPARCL1-208ENST00000535835 CLTCQ00610 1675 aaKnown RBP2.34□□□□□ -2.04
SPARCL1-208ENST00000535835 ALS2Q96Q42 1657 aa2.34□□□□□ -2.04
SPARCL1-208ENST00000535835 PRRC2AP48634 2157 aaKnown RBP2.33□□□□□ -2.04
SPARCL1-208ENST00000535835 IGHV3OR16-13A0A075B7E8 117 aa2.33□□□□□ -2.04
SPARCL1-208ENST00000535835 TRBV10-3A0A0K0K1G6 114 aa2.33□□□□□ -2.04
SPARCL1-208ENST00000535835 RBMY1BA6NDE4 496 aaKnown RBP2.33□□□□□ -2.04
SPARCL1-208ENST00000535835 RBMY1EA6NEQ0 496 aaKnown RBP2.33□□□□□ -2.04
SPARCL1-208ENST00000535835 H7BZZ5 65 aa2.33□□□□□ -2.04
SPARCL1-208ENST00000535835 HCRTO43612 131 aa2.33□□□□□ -2.04
SPARCL1-208ENST00000535835 PPYP01298 95 aa2.33□□□□□ -2.04
SPARCL1-208ENST00000535835 LTAP01374 205 aa2.33□□□□□ -2.04
SPARCL1-208ENST00000535835 PRM2P04554 102 aa2.33□□□□□ -2.04
SPARCL1-208ENST00000535835 RBMY1DP0C7P1 496 aaKnown RBP2.33□□□□□ -2.04
SPARCL1-208ENST00000535835 RBMY1A1P0DJD3 496 aaKnown RBP2.33□□□□□ -2.04
SPARCL1-208ENST00000535835 UBE2D1P51668 147 aa2.33□□□□□ -2.04
SPARCL1-208ENST00000535835 BLCAPP62952 87 aa2.33□□□□□ -2.04
SPARCL1-208ENST00000535835 IL17AQ16552 155 aa2.33□□□□□ -2.04
SPARCL1-208ENST00000535835 MRPL51Q4U2R6 128 aaKnown RBP2.33□□□□□ -2.04
SPARCL1-208ENST00000535835 LINC01554Q52M75 96 aa2.33□□□□□ -2.04
SPARCL1-208ENST00000535835 DAND5Q8N907 189 aa2.33□□□□□ -2.04
SPARCL1-208ENST00000535835 PRSS33Q8NF86 280 aa2.33□□□□□ -2.04
SPARCL1-208ENST00000535835 DYNLRB2Q8TF09 96 aa2.33□□□□□ -2.04
SPARCL1-208ENST00000535835 CHCHD10Q8WYQ3 142 aaPredicted RBP2.33□□□□□ -2.04
SPARCL1-208ENST00000535835 ZNF414Q96IQ9 312 aa2.33□□□□□ -2.04
SPARCL1-208ENST00000535835 OSTCQ9NRP0 149 aa2.33□□□□□ -2.04
SPARCL1-208ENST00000535835 NHP2Q9NX24 153 aaKnown RBP2.33□□□□□ -2.04
SPARCL1-208ENST00000535835 GNG13Q9P2W3 67 aa2.33□□□□□ -2.04
SPARCL1-208ENST00000535835 HILPDAQ9Y5L2 63 aa2.33□□□□□ -2.04
SPARCL1-208ENST00000535835 ANKRD36CQ5JPF3 1778 aa2.33□□□□□ -2.04
SPARCL1-208ENST00000535835 TMEM131Q92545 1883 aa2.33□□□□□ -2.04
SPARCL1-208ENST00000535835 COL1A1P02452 1464 aaPredicted RBP2.33□□□□□ -2.04
SPARCL1-208ENST00000535835 MYH8P13535 1937 aa2.32□□□□□ -2.04
SPARCL1-208ENST00000535835 CCDC88CQ9P219 2028 aa2.32□□□□□ -2.04
SPARCL1-208ENST00000535835 TRBV7-3A0A075B6L6 115 aa2.32□□□□□ -2.04
SPARCL1-208ENST00000535835 IGKV1D-43A0A0B4J1Z2 117 aa2.32□□□□□ -2.04
SPARCL1-208ENST00000535835 A0A1W2PQD3 144 aa2.32□□□□□ -2.04
SPARCL1-208ENST00000535835 CEBPZOSA8MTT3 80 aa2.32□□□□□ -2.04
SPARCL1-208ENST00000535835 H3BMM0 161 aa2.32□□□□□ -2.04
SPARCL1-208ENST00000535835 BUB1B-PAK6H3BSN5 160 aa2.32□□□□□ -2.04
SPARCL1-208ENST00000535835 J3QLW9 94 aa2.32□□□□□ -2.04
SPARCL1-208ENST00000535835 PIRTP0C851 137 aa2.32□□□□□ -2.04
SPARCL1-208ENST00000535835 RNASE2P10153 161 aaKnown RBP2.32□□□□□ -2.04
SPARCL1-208ENST00000535835 SLC25A16P16260 332 aa2.32□□□□□ -2.04
SPARCL1-208ENST00000535835 LMO2P25791 158 aa2.32□□□□□ -2.04
SPARCL1-208ENST00000535835 RNASE4P34096 147 aaKnown RBP2.32□□□□□ -2.04
SPARCL1-208ENST00000535835 XCL1P47992 114 aa2.32□□□□□ -2.04
SPARCL1-208ENST00000535835 NCBP2P52298 156 aaKnown RBP eCLIP2.32□□□□□ -2.04
SPARCL1-208ENST00000535835 KRTAP10-1P60331 282 aa2.32□□□□□ -2.04
SPARCL1-208ENST00000535835 FGF12P61328 243 aa2.32□□□□□ -2.04
SPARCL1-208ENST00000535835 ATXN8Q156A1 80 aa2.32□□□□□ -2.04
SPARCL1-208ENST00000535835 CEMP1Q6PRD7 247 aaPredicted RBP2.32□□□□□ -2.04
SPARCL1-208ENST00000535835 LINC00596Q86U02 117 aa2.32□□□□□ -2.04
SPARCL1-208ENST00000535835 C17orf82Q86X59 251 aaPredicted RBP2.32□□□□□ -2.04
SPARCL1-208ENST00000535835 LINC01555Q8NAE3 123 aa2.32□□□□□ -2.04
SPARCL1-208ENST00000535835 CCL4L1Q8NHW4 92 aa2.32□□□□□ -2.04
SPARCL1-208ENST00000535835 UBE2WQ96B02 151 aa2.32□□□□□ -2.04
SPARCL1-208ENST00000535835 Q96M85 177 aa2.32□□□□□ -2.04
SPARCL1-208ENST00000535835 TIMM21Q9BVV7 248 aa2.32□□□□□ -2.04
SPARCL1-208ENST00000535835 NPCDR1Q9BY65 106 aa2.32□□□□□ -2.04
SPARCL1-208ENST00000535835 CYP4F30PQ9H0H9 118 aa2.32□□□□□ -2.04
SPARCL1-208ENST00000535835 XAGE1AQ9HD64 81 aa2.32□□□□□ -2.04
SPARCL1-208ENST00000535835 TP73-AS1Q9UF72 201 aa2.32□□□□□ -2.04
SPARCL1-208ENST00000535835 ANK1P16157 1881 aa2.32□□□□□ -2.04
SPARCL1-208ENST00000535835 KDM6BO15054 1643 aa2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 PARP14Q460N5 1801 aa2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 KIF13BQ9NQT8 1826 aa2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 BAZ2AQ9UIF9 1905 aaKnown RBP2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 TRIP11Q15643 1979 aa2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 TRBV25-1A0A075B6N4 114 aa2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 IGHV3OR16-12A0A075B7B8 117 aa2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 IGHV1-45A0A0A0MS14 117 aa2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 TRGV8A0A0C4DH27 118 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms