RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 TNS1Q9HBL0 1735 aaKnown RBP3.93□□□□□ -1.78
SNHG1-201ENST00000535076 PMS2P5A8MQ11 134 aa3.93□□□□□ -1.78
SNHG1-201ENST00000535076 H7BZZ5 65 aa3.93□□□□□ -1.78
SNHG1-201ENST00000535076 M0R378 163 aa3.93□□□□□ -1.78
SNHG1-201ENST00000535076 VCYO14598 125 aa3.93□□□□□ -1.78
SNHG1-201ENST00000535076 SPINK4O60575 86 aa3.93□□□□□ -1.78
SNHG1-201ENST00000535076 SNRNP200O75643 2136 aaKnown RBP3.93□□□□□ -1.78
SNHG1-201ENST00000535076 ARL14EPLP0DKL9 152 aa3.93□□□□□ -1.78
SNHG1-201ENST00000535076 LAGE3Q14657 143 aa3.93□□□□□ -1.78
SNHG1-201ENST00000535076 ATP5EP2Q5VTU8 51 aa3.93□□□□□ -1.78
SNHG1-201ENST00000535076 Q6ZR03 302 aa3.93□□□□□ -1.78
SNHG1-201ENST00000535076 SFTPA2Q8IWL1 248 aa3.93□□□□□ -1.78
SNHG1-201ENST00000535076 SFTPA1Q8IWL2 248 aa3.93□□□□□ -1.78
SNHG1-201ENST00000535076 CD177Q8N6Q3 437 aa3.93□□□□□ -1.78
SNHG1-201ENST00000535076 LYZL4Q96KX0 146 aa3.93□□□□□ -1.78
SNHG1-201ENST00000535076 DEPPQ9NTK1 212 aa3.93□□□□□ -1.78
SNHG1-201ENST00000535076 COL4A3Q01955 1670 aa3.93□□□□□ -1.78
SNHG1-201ENST00000535076 LRP4O75096 1905 aa3.92□□□□□ -1.78
SNHG1-201ENST00000535076 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-201ENST00000535076 TRAV13-2A0A0B4J235 113 aa3.92□□□□□ -1.78
SNHG1-201ENST00000535076 TRAV12-1A0A0B4J245 112 aa3.92□□□□□ -1.78
SNHG1-201ENST00000535076 TRAV41A0A0B4J266 112 aa3.92□□□□□ -1.78
SNHG1-201ENST00000535076 TRBV10-3A0A0K0K1G6 114 aa3.92□□□□□ -1.78
SNHG1-201ENST00000535076 A0A1B0GVT2 93 aa3.92□□□□□ -1.78
SNHG1-201ENST00000535076 A0A1W2PQD3 144 aa3.92□□□□□ -1.78
SNHG1-201ENST00000535076 SRRM4A7MD48 611 aaKnown RBP3.92□□□□□ -1.78
SNHG1-201ENST00000535076 J3QT63 122 aa3.92□□□□□ -1.78
SNHG1-201ENST00000535076 HMGN2P05204 90 aaKnown RBP3.92□□□□□ -1.78
SNHG1-201ENST00000535076 CFC1BP0CG36 223 aa3.92□□□□□ -1.78
SNHG1-201ENST00000535076 CFC1P0CG37 223 aa3.92□□□□□ -1.78
SNHG1-201ENST00000535076 INAFM2P0DMQ5 153 aa3.92□□□□□ -1.78
SNHG1-201ENST00000535076 XCL1P47992 114 aa3.92□□□□□ -1.78
SNHG1-201ENST00000535076 RIGQ13278 110 aa3.92□□□□□ -1.78
SNHG1-201ENST00000535076 KISS1Q15726 138 aa3.92□□□□□ -1.78
SNHG1-201ENST00000535076 UNQ9165/PRO28630Q6UXU0 137 aa3.92□□□□□ -1.78
SNHG1-201ENST00000535076 MKXQ8IYA7 352 aa3.92□□□□□ -1.78
SNHG1-201ENST00000535076 C6orf223Q8N319 242 aa3.92□□□□□ -1.78
SNHG1-201ENST00000535076 Q8N7P7 452 aa3.92□□□□□ -1.78
SNHG1-201ENST00000535076 DCANP1Q8TF63 244 aa3.92□□□□□ -1.78
SNHG1-201ENST00000535076 TSACCQ96A04 125 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-201ENST00000535076 XCL2Q9UBD3 114 aa3.92□□□□□ -1.78
SNHG1-201ENST00000535076 CTSZQ9UBR2 303 aa3.92□□□□□ -1.78
SNHG1-201ENST00000535076 TAC3Q9UHF0 121 aa3.92□□□□□ -1.78
SNHG1-201ENST00000535076 PCNX3Q9H6A9 2034 aa3.92□□□□□ -1.78
SNHG1-201ENST00000535076 TCF20Q9UGU0 1960 aaKnown RBP3.91□□□□□ -1.78
SNHG1-201ENST00000535076 KIF26BQ2KJY2 2108 aa3.91□□□□□ -1.78
SNHG1-201ENST00000535076 IGLV3-16A0A075B6K0 115 aa3.91□□□□□ -1.78
SNHG1-201ENST00000535076 IGLV3-10A0A075B6K4 115 aa3.91□□□□□ -1.78
SNHG1-201ENST00000535076 RBMY1BA6NDE4 496 aaKnown RBP3.91□□□□□ -1.78
SNHG1-201ENST00000535076 RBMY1EA6NEQ0 496 aaKnown RBP3.91□□□□□ -1.78
SNHG1-201ENST00000535076 NXPH4O95158 308 aa3.91□□□□□ -1.78
SNHG1-201ENST00000535076 IGHV3-33P01772 117 aa3.91□□□□□ -1.78
SNHG1-201ENST00000535076 COX6CP09669 75 aa3.91□□□□□ -1.78
SNHG1-201ENST00000535076 RBMY1DP0C7P1 496 aaKnown RBP3.91□□□□□ -1.78
SNHG1-201ENST00000535076 RBMY1A1P0DJD3 496 aaKnown RBP3.91□□□□□ -1.78
SNHG1-201ENST00000535076 RBMY1CP0DJD4 496 aa3.91□□□□□ -1.78
SNHG1-201ENST00000535076 RNASE2P10153 161 aaKnown RBP3.91□□□□□ -1.78
SNHG1-201ENST00000535076 FCER1GP30273 86 aa3.91□□□□□ -1.78
SNHG1-201ENST00000535076 CKS2P33552 79 aa3.91□□□□□ -1.78
SNHG1-201ENST00000535076 FXYD3Q14802 87 aa3.91□□□□□ -1.78
SNHG1-201ENST00000535076 RBMY1FQ15415 496 aaKnown RBP3.91□□□□□ -1.78
SNHG1-201ENST00000535076 Q1T7F1 81 aa3.91□□□□□ -1.78
SNHG1-201ENST00000535076 GFRALQ6UXV0 394 aa3.91□□□□□ -1.78
SNHG1-201ENST00000535076 Q6YL49 198 aa3.91□□□□□ -1.78
SNHG1-201ENST00000535076 Q6ZVQ6 151 aa3.91□□□□□ -1.78
SNHG1-201ENST00000535076 LCA10Q71F78 164 aa3.91□□□□□ -1.78
SNHG1-201ENST00000535076 COX8CQ7Z4L0 72 aa3.91□□□□□ -1.78
SNHG1-201ENST00000535076 VN1R4Q7Z5H5 301 aa3.91□□□□□ -1.78
SNHG1-201ENST00000535076 MAPKAPK5-AS1Q8N8E1 139 aa3.91□□□□□ -1.78
SNHG1-201ENST00000535076 NUP37Q8NFH4 326 aa3.91□□□□□ -1.78
SNHG1-201ENST00000535076 RNASE6Q93091 150 aaKnown RBP3.91□□□□□ -1.78
SNHG1-201ENST00000535076 PGLYRP4Q96LB8 373 aa3.91□□□□□ -1.78
SNHG1-201ENST00000535076 C11orf68Q9H3H3 251 aaKnown RBP3.91□□□□□ -1.78
SNHG1-201ENST00000535076 RPP21Q9H633 154 aaKnown RBP3.91□□□□□ -1.78
SNHG1-201ENST00000535076 RNF186Q9NXI6 227 aa3.91□□□□□ -1.78
SNHG1-201ENST00000535076 MRPL35Q9NZE8 188 aaKnown RBP3.91□□□□□ -1.78
SNHG1-201ENST00000535076 AGRNO00468 2067 aa3.91□□□□□ -1.78
SNHG1-201ENST00000535076 PHF3Q92576 2039 aaKnown RBP3.9□□□□□ -1.78
SNHG1-201ENST00000535076 IGKV1D-8A0A087WSZ0 117 aa3.9□□□□□ -1.79
SNHG1-201ENST00000535076 IQCF6A8MYZ5 107 aa3.9□□□□□ -1.79
SNHG1-201ENST00000535076 H7C423 109 aa3.9□□□□□ -1.79
SNHG1-201ENST00000535076 CISD3P0C7P0 127 aa3.9□□□□□ -1.79
SNHG1-201ENST00000535076 ZNF22P17026 224 aaPredicted RBP3.9□□□□□ -1.79
SNHG1-201ENST00000535076 TMEM30BQ3MIR4 351 aa3.9□□□□□ -1.79
SNHG1-201ENST00000535076 SPANXN5Q5MJ07 72 aa3.9□□□□□ -1.79
SNHG1-201ENST00000535076 LY6G5CQ5SRR4 150 aa3.9□□□□□ -1.79
SNHG1-201ENST00000535076 FAM222AQ5U5X8 452 aa3.9□□□□□ -1.79
SNHG1-201ENST00000535076 LYPD5Q6UWN5 251 aa3.9□□□□□ -1.79
SNHG1-201ENST00000535076 ZNF329Q86UD4 541 aa3.9□□□□□ -1.79
SNHG1-201ENST00000535076 TOMM6Q96B49 74 aa3.9□□□□□ -1.79
SNHG1-201ENST00000535076 ZNF714Q96N38 554 aa3.9□□□□□ -1.79
SNHG1-201ENST00000535076 NABP2Q9BQ15 211 aa3.9□□□□□ -1.79
SNHG1-201ENST00000535076 CXXC4Q9H2H0 198 aa3.9□□□□□ -1.79
SNHG1-201ENST00000535076 Q9H3A6 140 aa3.9□□□□□ -1.79
SNHG1-201ENST00000535076 ZNF355PQ9NSJ1 428 aa3.9□□□□□ -1.79
SNHG1-201ENST00000535076 LINC00588Q9Y4M8 146 aa3.9□□□□□ -1.79
SNHG1-201ENST00000535076 THADAQ6YHU6 1953 aa3.89□□□□□ -1.79
SNHG1-201ENST00000535076 SMCHD1A6NHR9 2005 aa3.89□□□□□ -1.79
SNHG1-201ENST00000535076 TRAV7A0A075B6U4 112 aa3.89□□□□□ -1.79
SNHG1-201ENST00000535076 A0A1B0GUT8 65 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms