RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 TRBV6-6A0A0A6YYG2 114 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 TGIF2-C20orf24A0A0A6YYL0 155 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 TEX50A0A1B0GTY4 177 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 UBE2L5PA0A1B0GUS4 154 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 IGSF23A1L1A6 192 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 SMCO3A2RU48 225 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 RBFOX3A6NFN3 312 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 CRYM-AS1A6NIL9 109 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 CEBPZOSA8MTT3 80 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 TMEM14DPA8MWL7 114 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 C9JQL5 133 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 E5RGE8 158 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 TSTD3H0UI37 97 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 H3BMM0 161 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 PPP1R2P9O14990 202 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 HMGB3O15347 200 aaKnown RBP1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 CST7O76096 145 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 KBTBD11O94819 623 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 IFNA1P01562 189 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 MT-ND4LP03901 98 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 CFC1BP0CG36 223 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 CFC1P0CG37 223 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 FABP4P15090 132 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 HLA-GP17693 338 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 AZU1P20160 251 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 S100PP25815 95 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 G0S2P27469 103 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 NKX2-1P43699 371 aaPredicted RBP1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 SULT1A1P50225 295 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 FGF8P55075 233 aaPredicted RBP1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 POLR2GP62487 172 aaKnown RBP eCLIP1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 RAB11AP62491 216 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 RPL8P62917 257 aaKnown RBP1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 CTAG1AP78358 180 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 PNRC1Q12796 327 aaPredicted RBP1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 OR5I1Q13606 314 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 ADIRFQ15847 76 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 BATFQ16520 125 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 LINC01620Q4KN68 170 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 LCE3CQ5T5A8 94 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 LELP1Q5T871 98 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 AADACL3Q5VUY0 350 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 LCN15Q6UWW0 184 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 LYZL2Q7Z4W2 148 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 CMTM1Q8IZ96 169 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 ARRDC1Q8N5I2 433 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 EIF4E3Q8N5X7 224 aaKnown RBP1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 CYB561D1Q8N8Q1 229 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 DMBX1Q8NFW5 382 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 OR10D4PQ8NGN7 298 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 OR51H1Q8NH63 302 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 VN1R17PQ8TDU5 208 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 DCANP1Q8TF63 244 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 MRGPRFQ96AM1 343 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 AQP10Q96PS8 301 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 RTBDNQ9BSG5 229 aaPredicted RBP1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 HINT2Q9BX68 163 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 GFRA4Q9GZZ7 299 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 SLC25A31Q9H0C2 315 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 SLC35B3Q9H1N7 401 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 FNDC4Q9H6D8 234 aaPredicted RBP1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 WFDC1Q9HC57 220 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 GSN-AS1Q9NRJ2 163 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 CACFD1Q9UGQ2 172 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 ANXA10Q9UJ72 324 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 GPR132Q9UNW8 380 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 NSG2Q9Y328 171 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 RFNGQ9Y644 331 aa1.99□□□□□ -2.09
CHMP4A-208ENST00000534106 OBSCNQ5VST9 7968 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 TRAV26-1A0A087WT03 109 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 TRBV6-7A0A0A0MS04 114 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 IGKV1D-13A0A0B4J2D9 117 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 C3orf85A0A1B0GTC6 90 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 A0A1B0GV90 55 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 TMEM189A5PLL7 270 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 C5orf52A6NGY3 159 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 SMIM9A6NGZ8 99 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 COLCA2A8K830 154 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 FOXI3A8MTJ6 420 aaPredicted RBP1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 F6UB75 175 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 H3BQ15 152 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 I3L2K1 104 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 UPK2O00526 184 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 PITX3O75364 302 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 NDUFS6O75380 124 aaKnown RBP1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 HBE1P02100 147 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 SERPINE2P07093 398 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 FCGR3AP08637 254 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 CXCL1P09341 107 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 IGKV1-13P0DP09 117 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 FGF7P21781 194 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 ATP6V0CP27449 155 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 SNCAP37840 140 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 P2RY1P47900 373 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 UBE2G2P60604 165 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 SUPT4H1P63272 117 aaKnown RBP1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 SRPXP78539 464 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 QRFPP83859 136 aa1.98□□□□□ -2.09
CHMP4A-208ENST00000534106 BAXQ07812 192 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms