RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 LCN15Q6UWW0 184 aa4.08□□□□□ -1.76
CD44-237ENST00000534082 TMEM182Q6ZP80 229 aaPredicted RBP4.08□□□□□ -1.76
CD44-237ENST00000534082 LYSMD2Q8IV50 215 aa4.08□□□□□ -1.76
CD44-237ENST00000534082 PACRGLQ8N7B6 248 aa4.08□□□□□ -1.76
CD44-237ENST00000534082 OR10P1Q8NGE3 313 aa4.08□□□□□ -1.76
CD44-237ENST00000534082 OR1S1Q8NH92 325 aa4.08□□□□□ -1.76
CD44-237ENST00000534082 ZNF486Q96H40 463 aaPredicted RBP4.08□□□□□ -1.76
CD44-237ENST00000534082 DNAJC30Q96LL9 226 aa4.08□□□□□ -1.76
CD44-237ENST00000534082 ZNF331Q9NQX6 463 aaPredicted RBP4.08□□□□□ -1.76
CD44-237ENST00000534082 PMS2P5A8MQ11 134 aa4.07□□□□□ -1.76
CD44-237ENST00000534082 KLLNB2CW77 178 aa4.07□□□□□ -1.76
CD44-237ENST00000534082 PHOX2AO14813 284 aa4.07□□□□□ -1.76
CD44-237ENST00000534082 MPDU1O75352 247 aa4.07□□□□□ -1.76
CD44-237ENST00000534082 PFN1P07737 140 aaKnown RBP4.07□□□□□ -1.76
CD44-237ENST00000534082 SNRPCP09234 159 aaKnown RBP4.07□□□□□ -1.76
CD44-237ENST00000534082 S100PP25815 95 aa4.07□□□□□ -1.76
CD44-237ENST00000534082 RAP2BP61225 183 aa4.07□□□□□ -1.76
CD44-237ENST00000534082 FLI1Q01543 452 aaPredicted RBP4.07□□□□□ -1.76
CD44-237ENST00000534082 IL18Q14116 193 aa4.07□□□□□ -1.76
CD44-237ENST00000534082 REG3GQ6UW15 175 aa4.07□□□□□ -1.76
CD44-237ENST00000534082 SELENOHQ8IZQ5 122 aaKnown RBP4.07□□□□□ -1.76
CD44-237ENST00000534082 ZC2HC1AQ96GY0 325 aa4.07□□□□□ -1.76
CD44-237ENST00000534082 SLC50A1Q9BRV3 221 aa4.07□□□□□ -1.76
CD44-237ENST00000534082 KRTAP9-8Q9BYQ0 159 aa4.07□□□□□ -1.76
CD44-237ENST00000534082 COPZ2Q9P299 210 aa4.07□□□□□ -1.76
CD44-237ENST00000534082 HIGD1AQ9Y241 93 aa4.07□□□□□ -1.76
CD44-237ENST00000534082 IGHV1OR15-1A0A075B7D0 117 aa4.06□□□□□ -1.76
CD44-237ENST00000534082 TRAV4A0A0B4J268 109 aa4.06□□□□□ -1.76
CD44-237ENST00000534082 TMEM238C9JI98 176 aa4.06□□□□□ -1.76
CD44-237ENST00000534082 H3BTX0 84 aa4.06□□□□□ -1.76
CD44-237ENST00000534082 SLC17A3O00476 420 aa4.06□□□□□ -1.76
CD44-237ENST00000534082 MRPS12O15235 138 aaKnown RBP4.06□□□□□ -1.76
CD44-237ENST00000534082 CDS2O95674 445 aa4.06□□□□□ -1.76
CD44-237ENST00000534082 STAG3L2P0CL84 134 aa4.06□□□□□ -1.76
CD44-237ENST00000534082 RNASE4P34096 147 aaKnown RBP4.06□□□□□ -1.76
CD44-237ENST00000534082 CEBPGP53567 150 aa4.06□□□□□ -1.76
CD44-237ENST00000534082 ATP5IP56385 69 aaPredicted RBP4.06□□□□□ -1.76
CD44-237ENST00000534082 PRR3P79522 188 aaKnown RBP4.06□□□□□ -1.76
CD44-237ENST00000534082 MXD1Q05195 221 aa4.06□□□□□ -1.76
CD44-237ENST00000534082 CIRBPQ14011 172 aaKnown RBP4.06□□□□□ -1.76
CD44-237ENST00000534082 CCDC71LQ8N9Z2 235 aa4.06□□□□□ -1.76
CD44-237ENST00000534082 TPPP3Q9BW30 176 aa4.06□□□□□ -1.76
CD44-237ENST00000534082 TMEM222Q9H0R3 208 aa4.06□□□□□ -1.76
CD44-237ENST00000534082 VCX2Q9H322 139 aa4.06□□□□□ -1.76
CD44-237ENST00000534082 RBKSQ9H477 322 aa4.06□□□□□ -1.76
CD44-237ENST00000534082 DUSP21Q9H596 190 aa4.06□□□□□ -1.76
CD44-237ENST00000534082 TXNL4BQ9NX01 149 aaKnown RBP4.06□□□□□ -1.76
CD44-237ENST00000534082 HSPB7Q9UBY9 170 aa4.06□□□□□ -1.76
CD44-237ENST00000534082 CACFD1Q9UGQ2 172 aa4.06□□□□□ -1.76
CD44-237ENST00000534082 NAGKQ9UJ70 344 aa4.06□□□□□ -1.76
CD44-237ENST00000534082 TPRKBQ9Y3C4 175 aa4.06□□□□□ -1.76
CD44-237ENST00000534082 IGHV3-16A0A0C4DH30 117 aa4.05□□□□□ -1.76
CD44-237ENST00000534082 FABP12A6NFH5 140 aa4.05□□□□□ -1.76
CD44-237ENST00000534082 PITX3O75364 302 aa4.05□□□□□ -1.76
CD44-237ENST00000534082 HYPMO75409 117 aa4.05□□□□□ -1.76
CD44-237ENST00000534082 OR5G3P0C626 314 aa4.05□□□□□ -1.76
CD44-237ENST00000534082 LINC00614P0C842 121 aa4.05□□□□□ -1.76
CD44-237ENST00000534082 SULT1A3P0DMM9 295 aa4.05□□□□□ -1.76
CD44-237ENST00000534082 SULT1A4P0DMN0 295 aa4.05□□□□□ -1.76
CD44-237ENST00000534082 GATA1P15976 413 aaPredicted RBP4.05□□□□□ -1.76
CD44-237ENST00000534082 ANXA7P20073 488 aaKnown RBP4.05□□□□□ -1.76
CD44-237ENST00000534082 PRSS3P35030 304 aa4.05□□□□□ -1.76
CD44-237ENST00000534082 NHLH2Q02577 135 aa4.05□□□□□ -1.76
CD44-237ENST00000534082 AKR1C1Q04828 323 aa4.05□□□□□ -1.76
CD44-237ENST00000534082 OPCMLQ14982 345 aa4.05□□□□□ -1.76
CD44-237ENST00000534082 VWC2Q2TAL6 325 aa4.05□□□□□ -1.76
CD44-237ENST00000534082 TMEM268Q5VZI3 342 aa4.05□□□□□ -1.76
CD44-237ENST00000534082 ACOT7LQ6ZUV0 252 aa4.05□□□□□ -1.76
CD44-237ENST00000534082 PRSS48Q7RTY5 328 aa4.05□□□□□ -1.76
CD44-237ENST00000534082 SMIM15Q7Z3B0 74 aa4.05□□□□□ -1.76
CD44-237ENST00000534082 LHFPL1Q86WI0 220 aa4.05□□□□□ -1.76
CD44-237ENST00000534082 C9orf163Q8N9P6 203 aa4.05□□□□□ -1.76
CD44-237ENST00000534082 OR4C5Q8NGB2 326 aa4.05□□□□□ -1.76
CD44-237ENST00000534082 C7orf33Q8WU49 177 aa4.05□□□□□ -1.76
CD44-237ENST00000534082 RASL10AQ92737 203 aa4.05□□□□□ -1.76
CD44-237ENST00000534082 GTSF1LQ9H1H1 148 aa4.05□□□□□ -1.76
CD44-237ENST00000534082 OR51M1Q9H341 326 aa4.05□□□□□ -1.76
CD44-237ENST00000534082 A0A087WYN8 130 aa4.04□□□□□ -1.76
CD44-237ENST00000534082 A0A1B0GV90 55 aa4.04□□□□□ -1.76
CD44-237ENST00000534082 F8WDY8 70 aa4.04□□□□□ -1.76
CD44-237ENST00000534082 TCAPO15273 167 aa4.04□□□□□ -1.76
CD44-237ENST00000534082 MED6O75586 246 aa4.04□□□□□ -1.76
CD44-237ENST00000534082 GPX1P07203 203 aa4.04□□□□□ -1.76
CD44-237ENST00000534082 LINC00869P0C866 280 aa4.04□□□□□ -1.76
CD44-237ENST00000534082 SMIM6P0DI80 62 aa4.04□□□□□ -1.76
CD44-237ENST00000534082 SDC2P34741 201 aa4.04□□□□□ -1.76
CD44-237ENST00000534082 AP3S2P59780 193 aa4.04□□□□□ -1.76
CD44-237ENST00000534082 UBE2G2P60604 165 aa4.04□□□□□ -1.76
CD44-237ENST00000534082 RAB11AP62491 216 aa4.04□□□□□ -1.76
CD44-237ENST00000534082 ERCC8Q13216 396 aa4.04□□□□□ -1.76
CD44-237ENST00000534082 PRR9Q5T870 116 aa4.04□□□□□ -1.76
CD44-237ENST00000534082 SDIM1Q6ZPB5 146 aa4.04□□□□□ -1.76
CD44-237ENST00000534082 Q6ZQT7 251 aa4.04□□□□□ -1.76
CD44-237ENST00000534082 CYP2G1PQ6ZSU1 146 aa4.04□□□□□ -1.76
CD44-237ENST00000534082 OR13C8Q8NGS7 320 aa4.04□□□□□ -1.76
CD44-237ENST00000534082 GPX8Q8TED1 209 aa4.04□□□□□ -1.76
CD44-237ENST00000534082 GLYATL2Q8WU03 294 aa4.04□□□□□ -1.76
CD44-237ENST00000534082 S100A16Q96FQ6 103 aaKnown RBP4.04□□□□□ -1.76
CD44-237ENST00000534082 FAM19A4Q96LR4 140 aa4.04□□□□□ -1.76
CD44-237ENST00000534082 C2orf50Q96LR7 162 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms