RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 C17orf77Q96MU5 243 aa3.55□□□□□ -1.84
SSBP3-213ENST00000530618 ASCL2Q99929 193 aa3.55□□□□□ -1.84
SSBP3-213ENST00000530618 SLC35B3Q9H1N7 401 aa3.55□□□□□ -1.84
SSBP3-213ENST00000530618 TMPRSS5Q9H3S3 457 aa3.55□□□□□ -1.84
SSBP3-213ENST00000530618 U3KQK5 164 aa3.55□□□□□ -1.84
SSBP3-213ENST00000530618 LRP1BQ9NZR2 4599 aa3.55□□□□□ -1.84
SSBP3-213ENST00000530618 HSPG2P98160 4391 aa3.54□□□□□ -1.84
SSBP3-213ENST00000530618 APOBP04114 4563 aaKnown RBP3.54□□□□□ -1.84
SSBP3-213ENST00000530618 IGKV2-40A0A087WW87 121 aaPredicted RBP3.54□□□□□ -1.84
SSBP3-213ENST00000530618 TRAV8-2A0A0B4J237 113 aa3.54□□□□□ -1.84
SSBP3-213ENST00000530618 TRAV21A0A0B4J279 112 aa3.54□□□□□ -1.84
SSBP3-213ENST00000530618 TRBV6-1A0A0K0K1D8 114 aa3.54□□□□□ -1.84
SSBP3-213ENST00000530618 SCO2A0A1W2PP80 73 aa3.54□□□□□ -1.84
SSBP3-213ENST00000530618 TMEM189A5PLL7 270 aa3.54□□□□□ -1.84
SSBP3-213ENST00000530618 KNCNA6PVL3 124 aa3.54□□□□□ -1.84
SSBP3-213ENST00000530618 ZNF727A8MUV8 499 aa3.54□□□□□ -1.84
SSBP3-213ENST00000530618 NPIPB6E9PJ23 425 aa3.54□□□□□ -1.84
SSBP3-213ENST00000530618 M0R3E3 92 aa3.54□□□□□ -1.84
SSBP3-213ENST00000530618 IGKV2D-40P01614 121 aaPredicted RBP3.54□□□□□ -1.84
SSBP3-213ENST00000530618 IGKV3-20P01619 116 aa3.54□□□□□ -1.84
SSBP3-213ENST00000530618 NHLRC4P0CG21 123 aaPredicted RBP3.54□□□□□ -1.84
SSBP3-213ENST00000530618 RPL35AP18077 110 aaKnown RBP3.54□□□□□ -1.84
SSBP3-213ENST00000530618 ATP5G3P48201 142 aa3.54□□□□□ -1.84
SSBP3-213ENST00000530618 CCL20P78556 96 aa3.54□□□□□ -1.84
SSBP3-213ENST00000530618 PNRC1Q12796 327 aaPredicted RBP3.54□□□□□ -1.84
SSBP3-213ENST00000530618 ZNF674Q2M3X9 581 aa3.54□□□□□ -1.84
SSBP3-213ENST00000530618 CASC10Q5T4H9 136 aa3.54□□□□□ -1.84
SSBP3-213ENST00000530618 FAM162BQ5T6X4 162 aa3.54□□□□□ -1.84
SSBP3-213ENST00000530618 Q6ZWC4 215 aa3.54□□□□□ -1.84
SSBP3-213ENST00000530618 SSX7Q7RTT5 188 aa3.54□□□□□ -1.84
SSBP3-213ENST00000530618 PRNTQ86SH4 94 aa3.54□□□□□ -1.84
SSBP3-213ENST00000530618 TRPT1Q86TN4 253 aaKnown RBP3.54□□□□□ -1.84
SSBP3-213ENST00000530618 COMMD7Q86VX2 200 aa3.54□□□□□ -1.84
SSBP3-213ENST00000530618 BAGE2Q86Y30 109 aa3.54□□□□□ -1.84
SSBP3-213ENST00000530618 SBSPONQ8IVN8 264 aa3.54□□□□□ -1.84
SSBP3-213ENST00000530618 C11orf52Q96A22 123 aa3.54□□□□□ -1.84
SSBP3-213ENST00000530618 KCNS1Q96KK3 526 aa3.54□□□□□ -1.84
SSBP3-213ENST00000530618 RCHY1Q96PM5 261 aa3.54□□□□□ -1.84
SSBP3-213ENST00000530618 SMIM7Q9BQ49 75 aa3.54□□□□□ -1.84
SSBP3-213ENST00000530618 SPATA25Q9BR10 227 aa3.54□□□□□ -1.84
SSBP3-213ENST00000530618 ZNF492Q9P255 531 aa3.54□□□□□ -1.84
SSBP3-213ENST00000530618 PSG8Q9UQ74 426 aa3.54□□□□□ -1.84
SSBP3-213ENST00000530618 TP53TG1Q9Y2A0 90 aa3.54□□□□□ -1.84
SSBP3-213ENST00000530618 YTHDF2Q9Y5A9 579 aaKnown RBP3.54□□□□□ -1.84
SSBP3-213ENST00000530618 SELENOKQ9Y6D0 94 aa3.54□□□□□ -1.84
SSBP3-213ENST00000530618 LY96Q9Y6Y9 160 aa3.54□□□□□ -1.84
SSBP3-213ENST00000530618 TRGV11A0A075B6L2 103 aa3.53□□□□□ -1.84
SSBP3-213ENST00000530618 C7orf71A4D174 169 aa3.53□□□□□ -1.84
SSBP3-213ENST00000530618 SMIM9A6NGZ8 99 aa3.53□□□□□ -1.84
SSBP3-213ENST00000530618 FABP5P3A8MUU1 101 aa3.53□□□□□ -1.84
SSBP3-213ENST00000530618 ZNF705FA8MVS1 300 aaPredicted RBP3.53□□□□□ -1.84
SSBP3-213ENST00000530618 C9JCJ5 164 aa3.53□□□□□ -1.84
SSBP3-213ENST00000530618 C3orf84H3BNL1 204 aa3.53□□□□□ -1.84
SSBP3-213ENST00000530618 H7BYZ3 331 aa3.53□□□□□ -1.84
SSBP3-213ENST00000530618 PPP1R2P9O14990 202 aa3.53□□□□□ -1.84
SSBP3-213ENST00000530618 EIF3GO75821 320 aaKnown RBP eCLIP3.53□□□□□ -1.84
SSBP3-213ENST00000530618 MGST1P10620 155 aaKnown RBP3.53□□□□□ -1.84
SSBP3-213ENST00000530618 CRISP2P16562 243 aa3.53□□□□□ -1.84
SSBP3-213ENST00000530618 S100A4P26447 101 aaKnown RBP3.53□□□□□ -1.84
SSBP3-213ENST00000530618 RPL35P42766 123 aaKnown RBP3.53□□□□□ -1.84
SSBP3-213ENST00000530618 RPS20P60866 119 aaKnown RBP3.53□□□□□ -1.84
SSBP3-213ENST00000530618 GNG5P63218 68 aa3.53□□□□□ -1.84
SSBP3-213ENST00000530618 CENPWQ5EE01 88 aa3.53□□□□□ -1.84
SSBP3-213ENST00000530618 IGFL4Q6B9Z1 124 aa3.53□□□□□ -1.84
SSBP3-213ENST00000530618 FAM159AQ6UWV7 190 aa3.53□□□□□ -1.84
SSBP3-213ENST00000530618 Q86TA4 180 aa3.53□□□□□ -1.84
SSBP3-213ENST00000530618 TMEM183AQ8IXX5 376 aa3.53□□□□□ -1.84
SSBP3-213ENST00000530618 FAM24BQ8N5W8 94 aa3.53□□□□□ -1.84
SSBP3-213ENST00000530618 C15orf54Q8N8G6 183 aa3.53□□□□□ -1.84
SSBP3-213ENST00000530618 BORCS7Q96B45 105 aa3.53□□□□□ -1.84
SSBP3-213ENST00000530618 C20orf173Q96LM9 149 aa3.53□□□□□ -1.84
SSBP3-213ENST00000530618 IGF2BP2-AS1Q96M15 143 aa3.53□□□□□ -1.84
SSBP3-213ENST00000530618 PYGO2Q9BRQ0 406 aa3.53□□□□□ -1.84
SSBP3-213ENST00000530618 PARLQ9H300 379 aa3.53□□□□□ -1.84
SSBP3-213ENST00000530618 EDA2RQ9HAV5 297 aa3.53□□□□□ -1.84
SSBP3-213ENST00000530618 SDF2L1Q9HCN8 221 aa3.53□□□□□ -1.84
SSBP3-213ENST00000530618 LCE6AA0A183 80 aa3.52□□□□□ -1.85
SSBP3-213ENST00000530618 LINC00862A6NCI5 91 aa3.52□□□□□ -1.85
SSBP3-213ENST00000530618 CBY3A6NI87 242 aa3.52□□□□□ -1.85
SSBP3-213ENST00000530618 A8MTW9 85 aa3.52□□□□□ -1.85
SSBP3-213ENST00000530618 SNURFLB1AK76 121 aa3.52□□□□□ -1.85
SSBP3-213ENST00000530618 KRBOX1C9JBD0 128 aa3.52□□□□□ -1.85
SSBP3-213ENST00000530618 F6UB75 175 aa3.52□□□□□ -1.85
SSBP3-213ENST00000530618 F8W036 122 aa3.52□□□□□ -1.85
SSBP3-213ENST00000530618 LTAP01374 205 aa3.52□□□□□ -1.85
SSBP3-213ENST00000530618 P01737 135 aa3.52□□□□□ -1.85
SSBP3-213ENST00000530618 PFN1P07737 140 aaKnown RBP3.52□□□□□ -1.85
SSBP3-213ENST00000530618 FRMD6-AS1P0C7T7 363 aa3.52□□□□□ -1.85
SSBP3-213ENST00000530618 MIFP14174 115 aa3.52□□□□□ -1.85
SSBP3-213ENST00000530618 HLA-DMBP28068 263 aa3.52□□□□□ -1.85
SSBP3-213ENST00000530618 RNASE4P34096 147 aaKnown RBP3.52□□□□□ -1.85
SSBP3-213ENST00000530618 ERCC8Q13216 396 aa3.52□□□□□ -1.85
SSBP3-213ENST00000530618 OR5I1Q13606 314 aa3.52□□□□□ -1.85
SSBP3-213ENST00000530618 SPINK13Q1W4C9 94 aa3.52□□□□□ -1.85
SSBP3-213ENST00000530618 TMEM241Q24JQ0 296 aa3.52□□□□□ -1.85
SSBP3-213ENST00000530618 RRN3P1Q2M238 152 aa3.52□□□□□ -1.85
SSBP3-213ENST00000530618 Q6AWC8 147 aa3.52□□□□□ -1.85
SSBP3-213ENST00000530618 ZNF493Q6ZR52 646 aa3.52□□□□□ -1.85
SSBP3-213ENST00000530618 Q8N1Y9 231 aa3.52□□□□□ -1.85
SSBP3-213ENST00000530618 EIF4E3Q8N5X7 224 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms