RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 S100ZQ8WXG8 99 aa15.36■□□□□ 0.05
TRAPPC4-208ENST00000527680 C8orf49Q96NF6 230 aa15.36■□□□□ 0.05
TRAPPC4-208ENST00000527680 NMES1Q9C002 83 aa15.36■□□□□ 0.05
TRAPPC4-208ENST00000527680 WDR61Q9GZS3 305 aaKnown RBP15.36■□□□□ 0.05
TRAPPC4-208ENST00000527680 SCRT2Q9NQ03 307 aa15.36■□□□□ 0.05
TRAPPC4-208ENST00000527680 ABCA13Q86UQ4 5058 aa15.35■□□□□ 0.05
TRAPPC4-208ENST00000527680 CYCSP99999 105 aaKnown RBP15.35■□□□□ 0.05
TRAPPC4-208ENST00000527680 MRPL23Q16540 153 aaKnown RBP15.35■□□□□ 0.05
TRAPPC4-208ENST00000527680 Q8N1X5 172 aa15.35■□□□□ 0.05
TRAPPC4-208ENST00000527680 PHYHIPLQ96FC7 376 aa15.35■□□□□ 0.05
TRAPPC4-208ENST00000527680 LRP1BQ9NZR2 4599 aa15.35■□□□□ 0.05
TRAPPC4-208ENST00000527680 TRGV4A0A0C4DH28 118 aa15.34■□□□□ 0.05
TRAPPC4-208ENST00000527680 EREGO14944 169 aa15.34■□□□□ 0.05
TRAPPC4-208ENST00000527680 CRYBA4P53673 196 aa15.34■□□□□ 0.05
TRAPPC4-208ENST00000527680 TRBV7-9A0A0J9YWB2 115 aa15.33■□□□□ 0.04
TRAPPC4-208ENST00000527680 FHL2Q14192 279 aa15.33■□□□□ 0.04
TRAPPC4-208ENST00000527680 LYPD5Q6UWN5 251 aa15.33■□□□□ 0.04
TRAPPC4-208ENST00000527680 H0YIZ8 118 aa15.32■□□□□ 0.04
TRAPPC4-208ENST00000527680 LINC00299Q6ZSB3 139 aa15.32■□□□□ 0.04
TRAPPC4-208ENST00000527680 NEGR1Q7Z3B1 354 aa15.32■□□□□ 0.04
TRAPPC4-208ENST00000527680 LYPD1Q8N2G4 141 aa15.32■□□□□ 0.04
TRAPPC4-208ENST00000527680 TRAV9-2A0A087WT02 112 aa15.31■□□□□ 0.04
TRAPPC4-208ENST00000527680 RBAKDNA6NC62 111 aa15.31■□□□□ 0.04
TRAPPC4-208ENST00000527680 UBE2L3P68036 154 aaKnown RBP15.31■□□□□ 0.04
TRAPPC4-208ENST00000527680 ZNF266Q14584 549 aa15.31■□□□□ 0.04
TRAPPC4-208ENST00000527680 FFAR4Q5NUL3 377 aa15.31■□□□□ 0.04
TRAPPC4-208ENST00000527680 FAM159AQ6UWV7 190 aa15.31■□□□□ 0.04
TRAPPC4-208ENST00000527680 SCGB1C1Q8TD33 95 aa15.31■□□□□ 0.04
TRAPPC4-208ENST00000527680 HYLS1Q96M11 299 aa15.31■□□□□ 0.04
TRAPPC4-208ENST00000527680 MDFICQ9P1T7 246 aa15.31■□□□□ 0.04
TRAPPC4-208ENST00000527680 TNFRSF18Q9Y5U5 241 aa15.31■□□□□ 0.04
TRAPPC4-208ENST00000527680 TMEM183BQ1AE95 376 aa15.3■□□□□ 0.04
TRAPPC4-208ENST00000527680 TMEM183AQ8IXX5 376 aa15.3■□□□□ 0.04
TRAPPC4-208ENST00000527680 ATP5SQ99766 215 aa15.3■□□□□ 0.04
TRAPPC4-208ENST00000527680 PGPEP1Q9NXJ5 209 aa15.3■□□□□ 0.04
TRAPPC4-208ENST00000527680 INMT-MINDY4F8WBC2 141 aa15.29■□□□□ 0.04
TRAPPC4-208ENST00000527680 IFNA5P01569 189 aa15.29■□□□□ 0.04
TRAPPC4-208ENST00000527680 SFTA3P0C7M3 94 aa15.29■□□□□ 0.04
TRAPPC4-208ENST00000527680 TAS2R45P59539 299 aa15.29■□□□□ 0.04
TRAPPC4-208ENST00000527680 ERVFC1-1P60608 527 aa15.29■□□□□ 0.04
TRAPPC4-208ENST00000527680 Q6ZRN7 208 aaPredicted RBP15.29■□□□□ 0.04
TRAPPC4-208ENST00000527680 PPP1R1CQ8WVI7 109 aa15.29■□□□□ 0.04
TRAPPC4-208ENST00000527680 PCNPQ8WW12 178 aaKnown RBP15.29■□□□□ 0.04
TRAPPC4-208ENST00000527680 PTTG2Q9NZH5 202 aa15.29■□□□□ 0.04
TRAPPC4-208ENST00000527680 DIRC3C9JPN6 131 aa15.28■□□□□ 0.04
TRAPPC4-208ENST00000527680 UPK1BO75841 260 aa15.28■□□□□ 0.04
TRAPPC4-208ENST00000527680 SRIP30626 198 aa15.28■□□□□ 0.04
TRAPPC4-208ENST00000527680 KHDC3LQ587J8 217 aa15.28■□□□□ 0.04
TRAPPC4-208ENST00000527680 NFE4Q86UQ8 179 aa15.28■□□□□ 0.04
TRAPPC4-208ENST00000527680 ZNF479Q96JC4 524 aa15.28■□□□□ 0.04
TRAPPC4-208ENST00000527680 SPXQ9BT56 116 aa15.28■□□□□ 0.04
TRAPPC4-208ENST00000527680 SMIM3Q9BZL3 60 aa15.28■□□□□ 0.04
TRAPPC4-208ENST00000527680 NAGKQ9UJ70 344 aa15.28■□□□□ 0.04
TRAPPC4-208ENST00000527680 RPH3ALQ9UNE2 315 aa15.28■□□□□ 0.04
TRAPPC4-208ENST00000527680 CMTM2Q8TAZ6 248 aa15.27■□□□□ 0.04
TRAPPC4-208ENST00000527680 LY96Q9Y6Y9 160 aa15.27■□□□□ 0.04
TRAPPC4-208ENST00000527680 TRGV11A0A075B6L2 103 aa15.26■□□□□ 0.03
TRAPPC4-208ENST00000527680 PGPA6NDG6 321 aa15.26■□□□□ 0.03
TRAPPC4-208ENST00000527680 K7EQD1 137 aa15.26■□□□□ 0.03
TRAPPC4-208ENST00000527680 SSNA1O43805 119 aa15.26■□□□□ 0.03
TRAPPC4-208ENST00000527680 GYPEP15421 78 aa15.26■□□□□ 0.03
TRAPPC4-208ENST00000527680 FUSP35637 526 aaKnown RBP eCLIP15.26■□□□□ 0.03
TRAPPC4-208ENST00000527680 H2BFSP57053 126 aa15.26■□□□□ 0.03
TRAPPC4-208ENST00000527680 Q6AWC8 147 aa15.26■□□□□ 0.03
TRAPPC4-208ENST00000527680 HSPB11Q9Y547 144 aa15.26■□□□□ 0.03
TRAPPC4-208ENST00000527680 LENEPQ9Y5L5 61 aa15.26■□□□□ 0.03
TRAPPC4-208ENST00000527680 PET100P0DJ07 73 aa15.25■□□□□ 0.03
TRAPPC4-208ENST00000527680 FAM74A1Q5RGS3 127 aa15.25■□□□□ 0.03
TRAPPC4-208ENST00000527680 IQCF2Q8IXL9 164 aa15.25■□□□□ 0.03
TRAPPC4-208ENST00000527680 RASL10AQ92737 203 aa15.25■□□□□ 0.03
TRAPPC4-208ENST00000527680 MBD2Q9UBB5 411 aa15.25■□□□□ 0.03
TRAPPC4-208ENST00000527680 EIF3GO75821 320 aaKnown RBP eCLIP15.24■□□□□ 0.03
TRAPPC4-208ENST00000527680 MPC2O95563 127 aa15.24■□□□□ 0.03
TRAPPC4-208ENST00000527680 ORM1P02763 201 aa15.24■□□□□ 0.03
TRAPPC4-208ENST00000527680 EVI2AP22794 236 aa15.24■□□□□ 0.03
TRAPPC4-208ENST00000527680 RPL12P30050 165 aaKnown RBP15.24■□□□□ 0.03
TRAPPC4-208ENST00000527680 OR10G4Q8NGN3 311 aa15.24■□□□□ 0.03
TRAPPC4-208ENST00000527680 OTORQ9NRC9 128 aa15.24■□□□□ 0.03
TRAPPC4-208ENST00000527680 A0A1W2PPV4 95 aa15.23■□□□□ 0.03
TRAPPC4-208ENST00000527680 GNRH2O43555 120 aa15.23■□□□□ 0.03
TRAPPC4-208ENST00000527680 OR4C5Q8NGB2 326 aa15.23■□□□□ 0.03
TRAPPC4-208ENST00000527680 TXNDC17Q9BRA2 123 aa15.23■□□□□ 0.03
TRAPPC4-208ENST00000527680 IFITM3Q01628 133 aa15.22■□□□□ 0.03
TRAPPC4-208ENST00000527680 WFDC10BQ8IUB3 73 aa15.22■□□□□ 0.03
TRAPPC4-208ENST00000527680 APOBP04114 4563 aaKnown RBP15.21■□□□□ 0.03
TRAPPC4-208ENST00000527680 C9JCJ5 164 aa15.21■□□□□ 0.03
TRAPPC4-208ENST00000527680 ACOT6Q3I5F7 207 aaPredicted RBP15.21■□□□□ 0.03
TRAPPC4-208ENST00000527680 GOLT1AQ6ZVE7 132 aa15.21■□□□□ 0.03
TRAPPC4-208ENST00000527680 TMED6Q8WW62 240 aa15.21■□□□□ 0.03
TRAPPC4-208ENST00000527680 MSRB1Q9NZV6 116 aa15.21■□□□□ 0.03
TRAPPC4-208ENST00000527680 DNAH5Q8TE73 4624 aa15.2■□□□□ 0.02
TRAPPC4-208ENST00000527680 TRAV4A0A0B4J268 109 aa15.2■□□□□ 0.02
TRAPPC4-208ENST00000527680 TRAV21A0A0B4J279 112 aa15.2■□□□□ 0.02
TRAPPC4-208ENST00000527680 EPM2AB3EWF7 344 aa15.2■□□□□ 0.02
TRAPPC4-208ENST00000527680 M0R2P5 195 aa15.2■□□□□ 0.02
TRAPPC4-208ENST00000527680 CDPF1Q6NVV7 123 aa15.2■□□□□ 0.02
TRAPPC4-208ENST00000527680 MARVELD1Q9BSK0 173 aa15.2■□□□□ 0.02
TRAPPC4-208ENST00000527680 TREM1Q9NP99 234 aa15.2■□□□□ 0.02
TRAPPC4-208ENST00000527680 K7EP13 123 aa15.19■□□□□ 0.02
TRAPPC4-208ENST00000527680 DNAH10OSP0CZ25 163 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms