RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 C11orf21Q9P2W6 132 aa7.74□□□□□ -1.17
NEDD8-205ENST00000527046 TRBV20OR9-2A0A075B6H5 130 aa7.73□□□□□ -1.17
NEDD8-205ENST00000527046 C7orf71A4D174 169 aa7.73□□□□□ -1.17
NEDD8-205ENST00000527046 RBFOX3A6NFN3 312 aa7.73□□□□□ -1.17
NEDD8-205ENST00000527046 ZNF705GA8MUZ8 300 aaPredicted RBP7.73□□□□□ -1.17
NEDD8-205ENST00000527046 TEX46H3BTG2 121 aa7.73□□□□□ -1.17
NEDD8-205ENST00000527046 DEFB4AO15263 64 aa7.73□□□□□ -1.17
NEDD8-205ENST00000527046 LTAP01374 205 aa7.73□□□□□ -1.17
NEDD8-205ENST00000527046 IGLV2-8P01709 118 aa7.73□□□□□ -1.17
NEDD8-205ENST00000527046 GPX1P07203 203 aa7.73□□□□□ -1.17
NEDD8-205ENST00000527046 TSPOP30536 169 aa7.73□□□□□ -1.17
NEDD8-205ENST00000527046 MEF2BQ02080 365 aaPredicted RBP7.73□□□□□ -1.17
NEDD8-205ENST00000527046 Q6AWC8 147 aa7.73□□□□□ -1.17
NEDD8-205ENST00000527046 PRNTQ86SH4 94 aa7.73□□□□□ -1.17
NEDD8-205ENST00000527046 C20orf144Q9BQM9 153 aa7.73□□□□□ -1.17
NEDD8-205ENST00000527046 TXNDC17Q9BRA2 123 aa7.73□□□□□ -1.17
NEDD8-205ENST00000527046 MLST8Q9BVC4 326 aa7.73□□□□□ -1.17
NEDD8-205ENST00000527046 VAX2Q9UIW0 290 aa7.73□□□□□ -1.17
NEDD8-205ENST00000527046 IGHV3OR16-12A0A075B7B8 117 aa7.72□□□□□ -1.17
NEDD8-205ENST00000527046 A0A0J9YWU9 116 aa7.72□□□□□ -1.17
NEDD8-205ENST00000527046 F6UZH7 168 aa7.72□□□□□ -1.17
NEDD8-205ENST00000527046 INSP01308 110 aa7.72□□□□□ -1.17
NEDD8-205ENST00000527046 Q86TA4 180 aa7.72□□□□□ -1.17
NEDD8-205ENST00000527046 FAM210AQ96ND0 272 aa7.72□□□□□ -1.17
NEDD8-205ENST00000527046 LINC00467Q9BRT7 94 aa7.72□□□□□ -1.17
NEDD8-205ENST00000527046 TREM1Q9NP99 234 aa7.72□□□□□ -1.17
NEDD8-205ENST00000527046 RAB19A4D1S5 217 aa7.71□□□□□ -1.18
NEDD8-205ENST00000527046 SMIM9A6NGZ8 99 aa7.71□□□□□ -1.18
NEDD8-205ENST00000527046 FBLL1A6NHQ2 334 aaKnown RBP7.71□□□□□ -1.18
NEDD8-205ENST00000527046 H7BYZ3 331 aa7.71□□□□□ -1.18
NEDD8-205ENST00000527046 MIFP14174 115 aa7.71□□□□□ -1.18
NEDD8-205ENST00000527046 TAS2R60P59551 318 aa7.71□□□□□ -1.18
NEDD8-205ENST00000527046 RNASE8Q8TDE3 154 aaKnown RBP7.71□□□□□ -1.18
NEDD8-205ENST00000527046 ZC2HC1AQ96GY0 325 aa7.71□□□□□ -1.18
NEDD8-205ENST00000527046 LINC01587Q99440 93 aa7.71□□□□□ -1.18
NEDD8-205ENST00000527046 TP53TG3Q9ULZ0 132 aa7.71□□□□□ -1.18
NEDD8-205ENST00000527046 GOLT1BQ9Y3E0 138 aa7.71□□□□□ -1.18
NEDD8-205ENST00000527046 STAB2Q8WWQ8 2551 aa7.7□□□□□ -1.18
NEDD8-205ENST00000527046 K7EQM0 130 aa7.7□□□□□ -1.18
NEDD8-205ENST00000527046 SRP19P09132 144 aaKnown RBP7.7□□□□□ -1.18
NEDD8-205ENST00000527046 AKR1C3P42330 323 aa7.7□□□□□ -1.18
NEDD8-205ENST00000527046 RPL35P42766 123 aaKnown RBP7.7□□□□□ -1.18
NEDD8-205ENST00000527046 CLLU1Q5K131 121 aa7.7□□□□□ -1.18
NEDD8-205ENST00000527046 SAPCD1Q5SSQ6 148 aa7.7□□□□□ -1.18
NEDD8-205ENST00000527046 TMEM183AQ8IXX5 376 aa7.7□□□□□ -1.18
NEDD8-205ENST00000527046 TMEM256Q8N2U0 113 aa7.7□□□□□ -1.18
NEDD8-205ENST00000527046 C11orf72Q8NBR9 251 aa7.7□□□□□ -1.18
NEDD8-205ENST00000527046 FMC1Q96HJ9 113 aa7.7□□□□□ -1.18
NEDD8-205ENST00000527046 C11orf68Q9H3H3 251 aaKnown RBP7.7□□□□□ -1.18
NEDD8-205ENST00000527046 CELA1Q9UNI1 258 aa7.7□□□□□ -1.18
NEDD8-205ENST00000527046 ZFP30Q9Y2G7 519 aa7.7□□□□□ -1.18
NEDD8-205ENST00000527046 IGKV3D-20A0A0C4DH25 116 aa7.69□□□□□ -1.18
NEDD8-205ENST00000527046 GNRH2O43555 120 aa7.69□□□□□ -1.18
NEDD8-205ENST00000527046 PDE6DO43924 150 aa7.69□□□□□ -1.18
NEDD8-205ENST00000527046 NDUFS6O75380 124 aaKnown RBP7.69□□□□□ -1.18
NEDD8-205ENST00000527046 GCGP01275 180 aa7.69□□□□□ -1.18
NEDD8-205ENST00000527046 ZNF674Q2M3X9 581 aa7.69□□□□□ -1.18
NEDD8-205ENST00000527046 TDRG1Q3Y452 100 aa7.69□□□□□ -1.18
NEDD8-205ENST00000527046 ANXA2RQ3ZCQ2 193 aa7.69□□□□□ -1.18
NEDD8-205ENST00000527046 TOR2AQ5JU69 321 aa7.69□□□□□ -1.18
NEDD8-205ENST00000527046 ZNF767PQ75MW2 155 aa7.69□□□□□ -1.18
NEDD8-205ENST00000527046 NHLRC2Q8NBF2 726 aa7.69□□□□□ -1.18
NEDD8-205ENST00000527046 IL17DQ8TAD2 202 aa7.69□□□□□ -1.18
NEDD8-205ENST00000527046 PYGO2Q9BRQ0 406 aa7.69□□□□□ -1.18
NEDD8-205ENST00000527046 IGHV1OR15-1A0A075B7D0 117 aa7.68□□□□□ -1.18
NEDD8-205ENST00000527046 PGPEP1LA6NFU8 196 aa7.68□□□□□ -1.18
NEDD8-205ENST00000527046 RGS13O14921 159 aa7.68□□□□□ -1.18
NEDD8-205ENST00000527046 IFNA1P01562 189 aa7.68□□□□□ -1.18
NEDD8-205ENST00000527046 S100A9P06702 114 aaKnown RBP7.68□□□□□ -1.18
NEDD8-205ENST00000527046 TAGLN2P37802 199 aaKnown RBP7.68□□□□□ -1.18
NEDD8-205ENST00000527046 RRN3P1Q2M238 152 aa7.68□□□□□ -1.18
NEDD8-205ENST00000527046 SMUG1Q53HV7 270 aa7.68□□□□□ -1.18
NEDD8-205ENST00000527046 MUC21Q5SSG8 566 aa7.68□□□□□ -1.18
NEDD8-205ENST00000527046 BAGE2Q86Y30 109 aa7.68□□□□□ -1.18
NEDD8-205ENST00000527046 NIPSNAP3BQ9BS92 247 aa7.68□□□□□ -1.18
NEDD8-205ENST00000527046 MED9Q9NWA0 146 aa7.68□□□□□ -1.18
NEDD8-205ENST00000527046 MDFICQ9P1T7 246 aa7.68□□□□□ -1.18
NEDD8-205ENST00000527046 TMEM250H0YL14 139 aa7.67□□□□□ -1.18
NEDD8-205ENST00000527046 PFN1P07737 140 aaKnown RBP7.67□□□□□ -1.18
NEDD8-205ENST00000527046 HTN1P15515 57 aa7.67□□□□□ -1.18
NEDD8-205ENST00000527046 C12orf74Q32Q52 190 aa7.67□□□□□ -1.18
NEDD8-205ENST00000527046 EIF4E3Q8N5X7 224 aaKnown RBP7.67□□□□□ -1.18
NEDD8-205ENST00000527046 LINC00612Q8N6U2 182 aa7.67□□□□□ -1.18
NEDD8-205ENST00000527046 OCC1Q8TAD7 63 aa7.67□□□□□ -1.18
NEDD8-205ENST00000527046 TMEM208Q9BTX3 173 aa7.67□□□□□ -1.18
NEDD8-205ENST00000527046 DKK2Q9UBU2 259 aa7.67□□□□□ -1.18
NEDD8-205ENST00000527046 MUC4Q99102 2169 aa7.67□□□□□ -1.18
NEDD8-205ENST00000527046 TRAV21A0A0B4J279 112 aa7.66□□□□□ -1.18
NEDD8-205ENST00000527046 IGHV3-16A0A0C4DH30 117 aa7.66□□□□□ -1.18
NEDD8-205ENST00000527046 FABP5P3A8MUU1 101 aa7.66□□□□□ -1.18
NEDD8-205ENST00000527046 SH2D1AO60880 128 aa7.66□□□□□ -1.18
NEDD8-205ENST00000527046 TYMSP04818 313 aa7.66□□□□□ -1.18
NEDD8-205ENST00000527046 UBE2G1P62253 170 aa7.66□□□□□ -1.18
NEDD8-205ENST00000527046 CENPWQ5EE01 88 aa7.66□□□□□ -1.18
NEDD8-205ENST00000527046 ZNF493Q6ZR52 646 aa7.66□□□□□ -1.18
NEDD8-205ENST00000527046 TMEM263Q8WUH6 116 aaKnown RBP7.66□□□□□ -1.18
NEDD8-205ENST00000527046 WWC2-AS2Q96NR7 200 aa7.66□□□□□ -1.18
NEDD8-205ENST00000527046 EIF5A2Q9GZV4 153 aaKnown RBP7.66□□□□□ -1.18
NEDD8-205ENST00000527046 PARLQ9H300 379 aa7.66□□□□□ -1.18
NEDD8-205ENST00000527046 GSN-AS1Q9NRJ2 163 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms