RNA–Protein interactions for RNA: ENST00000527045.1

FDFT1-211, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 1 (best)

Gene FDFT1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-211ENST00000527045 ZFAND1Q8TCF1 268 aa5.38□□□□□ -1.55
FDFT1-211ENST00000527045 GTSF1Q8WW33 167 aa5.38□□□□□ -1.55
FDFT1-211ENST00000527045 PRADC1Q9BSG0 188 aa5.38□□□□□ -1.55
FDFT1-211ENST00000527045 ARL6Q9H0F7 186 aa5.38□□□□□ -1.55
FDFT1-211ENST00000527045 AGPAT4-IT1Q9H0P7 198 aa5.38□□□□□ -1.55
FDFT1-211ENST00000527045 PXMP4Q9Y6I8 212 aa5.38□□□□□ -1.55
FDFT1-211ENST00000527045 SMCO3A2RU48 225 aa5.37□□□□□ -1.55
FDFT1-211ENST00000527045 PRSS46E5RG02 174 aa5.37□□□□□ -1.55
FDFT1-211ENST00000527045 H3BQ15 152 aa5.37□□□□□ -1.55
FDFT1-211ENST00000527045 M0R3E3 92 aa5.37□□□□□ -1.55
FDFT1-211ENST00000527045 TGFBR1P36897 503 aa5.37□□□□□ -1.55
FDFT1-211ENST00000527045 PLP1P60201 277 aa5.37□□□□□ -1.55
FDFT1-211ENST00000527045 NCS1P62166 190 aa5.37□□□□□ -1.55
FDFT1-211ENST00000527045 SMCO1Q147U7 214 aa5.37□□□□□ -1.55
FDFT1-211ENST00000527045 SPCS2Q15005 226 aa5.37□□□□□ -1.55
FDFT1-211ENST00000527045 RHOHQ15669 191 aa5.37□□□□□ -1.55
FDFT1-211ENST00000527045 TMEM183BQ1AE95 376 aa5.37□□□□□ -1.55
FDFT1-211ENST00000527045 CNPY1Q3B7I2 92 aa5.37□□□□□ -1.55
FDFT1-211ENST00000527045 TMEM183AQ8IXX5 376 aa5.37□□□□□ -1.55
FDFT1-211ENST00000527045 ZFAND2AQ8N6M9 145 aa5.37□□□□□ -1.55
FDFT1-211ENST00000527045 MARCH1Q8TCQ1 289 aa5.37□□□□□ -1.55
FDFT1-211ENST00000527045 SAT2Q96F10 170 aaPredicted RBP5.37□□□□□ -1.55
FDFT1-211ENST00000527045 SPXQ9BT56 116 aa5.37□□□□□ -1.55
FDFT1-211ENST00000527045 ARV1Q9H2C2 271 aa5.37□□□□□ -1.55
FDFT1-211ENST00000527045 NAA60Q9H7X0 242 aa5.37□□□□□ -1.55
FDFT1-211ENST00000527045 URGCP-MRPS24S4R325 110 aa5.37□□□□□ -1.55
FDFT1-211ENST00000527045 IGHV3-73A0A0B4J1V6 119 aa5.36□□□□□ -1.55
FDFT1-211ENST00000527045 FBLL1A6NHQ2 334 aaKnown RBP5.36□□□□□ -1.55
FDFT1-211ENST00000527045 H7C1H1 209 aa5.36□□□□□ -1.55
FDFT1-211ENST00000527045 HLA-DQA1P01909 254 aa5.36□□□□□ -1.55
FDFT1-211ENST00000527045 IGLC2P0DOY2 106 aa5.36□□□□□ -1.55
FDFT1-211ENST00000527045 CRISP2P16562 243 aa5.36□□□□□ -1.55
FDFT1-211ENST00000527045 CCR6P51684 374 aa5.36□□□□□ -1.55
FDFT1-211ENST00000527045 RNASE10Q5GAN6 216 aaKnown RBP5.36□□□□□ -1.55
FDFT1-211ENST00000527045 ATRAIDQ6UW56 229 aa5.36□□□□□ -1.55
FDFT1-211ENST00000527045 LINC00305Q7Z4B0 112 aa5.36□□□□□ -1.55
FDFT1-211ENST00000527045 NIT1Q86X76 327 aa5.36□□□□□ -1.55
FDFT1-211ENST00000527045 BPIFA4PQ86YQ2 179 aa5.36□□□□□ -1.55
FDFT1-211ENST00000527045 SNX29P2Q8IUI4 249 aa5.36□□□□□ -1.55
FDFT1-211ENST00000527045 SAMD12Q8N8I0 201 aa5.36□□□□□ -1.55
FDFT1-211ENST00000527045 SRRQ9GZT4 340 aa5.36□□□□□ -1.55
FDFT1-211ENST00000527045 OR51M1Q9H341 326 aa5.36□□□□□ -1.55
FDFT1-211ENST00000527045 hCG_2014768A0A024R1R8 64 aa5.35□□□□□ -1.55
FDFT1-211ENST00000527045 TAAR5O14804 337 aa5.35□□□□□ -1.55
FDFT1-211ENST00000527045 AKR1C4P17516 323 aa5.35□□□□□ -1.55
FDFT1-211ENST00000527045 RPS19P39019 145 aaKnown RBP5.35□□□□□ -1.55
FDFT1-211ENST00000527045 UBE2MP61081 183 aaKnown RBP5.35□□□□□ -1.55
FDFT1-211ENST00000527045 POLR2GP62487 172 aaKnown RBP eCLIP5.35□□□□□ -1.55
FDFT1-211ENST00000527045 RPL19P84098 196 aaKnown RBP5.35□□□□□ -1.55
FDFT1-211ENST00000527045 SCGB2B2Q4G0G5 96 aa5.35□□□□□ -1.55
FDFT1-211ENST00000527045 S100A7AQ86SG5 101 aa5.35□□□□□ -1.55
FDFT1-211ENST00000527045 DYNC2LI1Q8TCX1 351 aa5.35□□□□□ -1.55
FDFT1-211ENST00000527045 SPACA4Q8TDM5 124 aa5.35□□□□□ -1.55
FDFT1-211ENST00000527045 RNF185Q96GF1 192 aa5.35□□□□□ -1.55
FDFT1-211ENST00000527045 RTBDNQ9BSG5 229 aaPredicted RBP5.35□□□□□ -1.55
FDFT1-211ENST00000527045 C1orf43Q9BWL3 253 aa5.35□□□□□ -1.55
FDFT1-211ENST00000527045 KRTAP3-1Q9BYR8 98 aa5.35□□□□□ -1.55
FDFT1-211ENST00000527045 PLAC8Q9NZF1 115 aa5.35□□□□□ -1.55
FDFT1-211ENST00000527045 TRBV6-4A0A1B0GX49 114 aa5.34□□□□□ -1.55
FDFT1-211ENST00000527045 M0R2P5 195 aa5.34□□□□□ -1.55
FDFT1-211ENST00000527045 ZNF253O75346 499 aa5.34□□□□□ -1.55
FDFT1-211ENST00000527045 CD3DP04234 171 aa5.34□□□□□ -1.55
FDFT1-211ENST00000527045 SEC11BP0C7V7 166 aa5.34□□□□□ -1.55
FDFT1-211ENST00000527045 BAK1Q16611 211 aa5.34□□□□□ -1.55
FDFT1-211ENST00000527045 LYZL2Q7Z4W2 148 aa5.34□□□□□ -1.55
FDFT1-211ENST00000527045 TERB2Q8NHR7 220 aa5.34□□□□□ -1.55
FDFT1-211ENST00000527045 C14orf166Q9Y224 244 aaKnown RBP5.34□□□□□ -1.55
FDFT1-211ENST00000527045 RNF24Q9Y225 148 aa5.34□□□□□ -1.55
FDFT1-211ENST00000527045 TRGV11A0A075B6L2 103 aa5.33□□□□□ -1.56
FDFT1-211ENST00000527045 IGKV2-40A0A087WW87 121 aaPredicted RBP5.33□□□□□ -1.56
FDFT1-211ENST00000527045 TRAV26-2A0A0B4J265 109 aa5.33□□□□□ -1.56
FDFT1-211ENST00000527045 FAM231BA6NCW3 169 aa5.33□□□□□ -1.56
FDFT1-211ENST00000527045 C5orf51A6NDU8 294 aa5.33□□□□□ -1.56
FDFT1-211ENST00000527045 GAGE12JA6NER3 117 aa5.33□□□□□ -1.56
FDFT1-211ENST00000527045 IGKV2D-40P01614 121 aaPredicted RBP5.33□□□□□ -1.56
FDFT1-211ENST00000527045 NMBP08949 121 aa5.33□□□□□ -1.56
FDFT1-211ENST00000527045 SELENOTP62341 195 aa5.33□□□□□ -1.56
FDFT1-211ENST00000527045 GAGE1Q13065 139 aa5.33□□□□□ -1.56
FDFT1-211ENST00000527045 GAGE4Q13068 117 aa5.33□□□□□ -1.56
FDFT1-211ENST00000527045 GAGE5Q13069 117 aa5.33□□□□□ -1.56
FDFT1-211ENST00000527045 SRSF9Q13242 221 aaKnown RBP eCLIP5.33□□□□□ -1.56
FDFT1-211ENST00000527045 RAB31Q13636 194 aa5.33□□□□□ -1.56
FDFT1-211ENST00000527045 GAGE13Q4V321 117 aa5.33□□□□□ -1.56
FDFT1-211ENST00000527045 LYPD6BQ8NI32 183 aa5.33□□□□□ -1.56
FDFT1-211ENST00000527045 IGHV3-64A0A075B6Q5 118 aa5.32□□□□□ -1.56
FDFT1-211ENST00000527045 MUC21A0A0G2JKD1 596 aa5.32□□□□□ -1.56
FDFT1-211ENST00000527045 H3BP45 60 aa5.32□□□□□ -1.56
FDFT1-211ENST00000527045 WRBO00258 174 aa5.32□□□□□ -1.56
FDFT1-211ENST00000527045 Q0VG73 95 aa5.32□□□□□ -1.56
FDFT1-211ENST00000527045 C4orf46Q504U0 113 aa5.32□□□□□ -1.56
FDFT1-211ENST00000527045 SPANXN5Q5MJ07 72 aa5.32□□□□□ -1.56
FDFT1-211ENST00000527045 TMEM78Q5T7P6 136 aa5.32□□□□□ -1.56
FDFT1-211ENST00000527045 OR52I2Q8NH67 350 aa5.32□□□□□ -1.56
FDFT1-211ENST00000527045 Q8TAT8 98 aa5.32□□□□□ -1.56
FDFT1-211ENST00000527045 MRPL53Q96EL3 112 aaKnown RBP5.32□□□□□ -1.56
FDFT1-211ENST00000527045 SLIRPQ9GZT3 109 aaKnown RBP5.32□□□□□ -1.56
FDFT1-211ENST00000527045 SH3BGRL3Q9H299 93 aa5.32□□□□□ -1.56
FDFT1-211ENST00000527045 CCDC59Q9P031 241 aaKnown RBP5.32□□□□□ -1.56
FDFT1-211ENST00000527045 NAGKQ9UJ70 344 aa5.32□□□□□ -1.56
FDFT1-211ENST00000527045 A0A087WX48 190 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms