RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, human

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATPAF1-208	ENST00000526821	TSSC4	Q9Y5U2	329 aa	Predicted RBP	4.61	□□□□□ -1.67
ATPAF1-208	ENST00000526821	TRAV8-1	A0A0A6YYK1	113 aa		4.6	□□□□□ -1.67
ATPAF1-208	ENST00000526821		A0A1B0GUS0	222 aa		4.6	□□□□□ -1.67
ATPAF1-208	ENST00000526821	RBAKDN	A6NC62	111 aa		4.6	□□□□□ -1.67
ATPAF1-208	ENST00000526821	FBLL1	A6NHQ2	334 aa	Known RBP	4.6	□□□□□ -1.67
ATPAF1-208	ENST00000526821	PCP4L1	A6NKN8	68 aa		4.6	□□□□□ -1.67
ATPAF1-208	ENST00000526821	PRAC2	D3DTV9	90 aa		4.6	□□□□□ -1.67
ATPAF1-208	ENST00000526821	GATC	O43716	136 aa	Known RBP	4.6	□□□□□ -1.67
ATPAF1-208	ENST00000526821	PFN1	P07737	140 aa	Known RBP	4.6	□□□□□ -1.67
ATPAF1-208	ENST00000526821	SMIM6	P0DI80	62 aa		4.6	□□□□□ -1.67
ATPAF1-208	ENST00000526821	FOLR2	P14207	255 aa		4.6	□□□□□ -1.67
ATPAF1-208	ENST00000526821	CBLN1	P23435	193 aa		4.6	□□□□□ -1.67
ATPAF1-208	ENST00000526821	HLA-DMB	P28068	263 aa		4.6	□□□□□ -1.67
ATPAF1-208	ENST00000526821	BMI1	P35226	326 aa		4.6	□□□□□ -1.67
ATPAF1-208	ENST00000526821	KRTAP10-3	P60369	221 aa		4.6	□□□□□ -1.67
ATPAF1-208	ENST00000526821	UBE2G1	P62253	170 aa		4.6	□□□□□ -1.67
ATPAF1-208	ENST00000526821	PSG3	Q16557	428 aa		4.6	□□□□□ -1.67
ATPAF1-208	ENST00000526821	PIK3CD-AS1	Q5SR53	167 aa		4.6	□□□□□ -1.67
ATPAF1-208	ENST00000526821	HIST2H2BD	Q6DRA6	164 aa		4.6	□□□□□ -1.67
ATPAF1-208	ENST00000526821	LCN12	Q6JVE5	192 aa		4.6	□□□□□ -1.67
ATPAF1-208	ENST00000526821	FAM231D	Q6ZW35	169 aa		4.6	□□□□□ -1.67
ATPAF1-208	ENST00000526821	BAGE2	Q86Y30	109 aa		4.6	□□□□□ -1.67
ATPAF1-208	ENST00000526821	C15orf54	Q8N8G6	183 aa		4.6	□□□□□ -1.67
ATPAF1-208	ENST00000526821	KLHL30-AS1	Q8NEE0	82 aa		4.6	□□□□□ -1.67
ATPAF1-208	ENST00000526821	DLX4	Q92988	240 aa	Predicted RBP	4.6	□□□□□ -1.67
ATPAF1-208	ENST00000526821	SFRP2	Q96HF1	295 aa		4.6	□□□□□ -1.67
ATPAF1-208	ENST00000526821	OSTC	Q9NRP0	149 aa		4.6	□□□□□ -1.67
ATPAF1-208	ENST00000526821	MLX	Q9UH92	298 aa		4.6	□□□□□ -1.67
ATPAF1-208	ENST00000526821	ZFP30	Q9Y2G7	519 aa		4.6	□□□□□ -1.67
ATPAF1-208	ENST00000526821	NIPBL	Q6KC79	2804 aa	eCLIP	4.6	□□□□□ -1.67
ATPAF1-208	ENST00000526821	MAST4	O15021	2626 aa		4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821	C19orf71	A6NCJ1	209 aa		4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821	ZNF705F	A8MVS1	300 aa	Predicted RBP	4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821		H7BYZ3	331 aa		4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821		K7EQM0	130 aa		4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821	CCL24	O00175	119 aa		4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821	PPP1R2P9	O14990	202 aa		4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821	CSN3	P07498	182 aa		4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821	CSN1S1	P47710	185 aa		4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821	NANOS2	P60321	138 aa	Known RBP	4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821	SST	P61278	116 aa		4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821	OR5I1	Q13606	314 aa		4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821	ELOB	Q15370	118 aa		4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821	JMJD1C	Q15652	2540 aa		4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821	SAMD13	Q5VXD3	122 aa		4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821	TCF24	Q7RTU0	167 aa		4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821	TMEM183A	Q8IXX5	376 aa		4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821	RNF182	Q8N6D2	247 aa		4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821	OR10G8	Q8NGN5	311 aa		4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821	OR9G4	Q8NGQ1	327 aa		4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821	DCANP1	Q8TF63	244 aa		4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821	SGK494	Q96LW2	274 aa		4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821	DUX3	Q96PT4	197 aa		4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821	IMMP2L	Q96T52	175 aa		4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821	TEP1	Q99973	2627 aa	Known RBP	4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821	VGLL1	Q99990	258 aa		4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821	PYGO2	Q9BRQ0	406 aa		4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821	SAV1	Q9H4B6	383 aa	Predicted RBP	4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821	BIN3	Q9NQY0	253 aa		4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821	PPP1R14D	Q9NXH3	145 aa		4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821	SIGLEC8	Q9NYZ4	499 aa		4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821	ZNF492	Q9P255	531 aa		4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821	PEMT	Q9UBM1	199 aa		4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821	RPH3AL	Q9UNE2	315 aa		4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821	PSG8	Q9UQ74	426 aa		4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821		V9GYV3	84 aa		4.59	□□□□□ -1.67
ATPAF1-208	ENST00000526821	TRBV24-1	A0A075B6N3	115 aa		4.58	□□□□□ -1.68
ATPAF1-208	ENST00000526821	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	4.58	□□□□□ -1.68
ATPAF1-208	ENST00000526821	GAGE12J	A6NER3	117 aa		4.58	□□□□□ -1.68
ATPAF1-208	ENST00000526821		K7EQG2	157 aa		4.58	□□□□□ -1.68
ATPAF1-208	ENST00000526821	IGKV2D-40	P01614	121 aa	Predicted RBP	4.58	□□□□□ -1.68
ATPAF1-208	ENST00000526821	S100A8	P05109	93 aa		4.58	□□□□□ -1.68
ATPAF1-208	ENST00000526821	LINC00322	Q6ZN03	302 aa	Predicted RBP	4.58	□□□□□ -1.68
ATPAF1-208	ENST00000526821	PRNT	Q86SH4	94 aa		4.58	□□□□□ -1.68
ATPAF1-208	ENST00000526821	NDUFA11	Q86Y39	141 aa		4.58	□□□□□ -1.68
ATPAF1-208	ENST00000526821	FAM24B	Q8N5W8	94 aa		4.58	□□□□□ -1.68
ATPAF1-208	ENST00000526821	NHLRC2	Q8NBF2	726 aa		4.58	□□□□□ -1.68
ATPAF1-208	ENST00000526821	ZC2HC1A	Q96GY0	325 aa		4.58	□□□□□ -1.68
ATPAF1-208	ENST00000526821	RNASE7	Q9H1E1	156 aa	Known RBP	4.58	□□□□□ -1.68
ATPAF1-208	ENST00000526821	MS4A6A	Q9H2W1	248 aa		4.58	□□□□□ -1.68
ATPAF1-208	ENST00000526821	TENM1	Q9UKZ4	2725 aa		4.57	□□□□□ -1.68
ATPAF1-208	ENST00000526821	TRAV2	A0A0B4J234	112 aa		4.57	□□□□□ -1.68
ATPAF1-208	ENST00000526821		M0QZ24	198 aa		4.57	□□□□□ -1.68
ATPAF1-208	ENST00000526821	OVOL1	O14753	267 aa		4.57	□□□□□ -1.68
ATPAF1-208	ENST00000526821	CXCL1	P09341	107 aa		4.57	□□□□□ -1.68
ATPAF1-208	ENST00000526821	PRB4	P10163	310 aa	Predicted RBP	4.57	□□□□□ -1.68
ATPAF1-208	ENST00000526821	MGST1	P10620	155 aa	Known RBP	4.57	□□□□□ -1.68
ATPAF1-208	ENST00000526821	CRIP1	P50238	77 aa		4.57	□□□□□ -1.68
ATPAF1-208	ENST00000526821	ERVFC1-1	P60608	527 aa		4.57	□□□□□ -1.68
ATPAF1-208	ENST00000526821	DEFB114	Q30KQ6	69 aa		4.57	□□□□□ -1.68
ATPAF1-208	ENST00000526821	SAPCD1	Q5SSQ6	148 aa		4.57	□□□□□ -1.68
ATPAF1-208	ENST00000526821	IBA57	Q5T440	356 aa	Known RBP	4.57	□□□□□ -1.68
ATPAF1-208	ENST00000526821	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	4.57	□□□□□ -1.68
ATPAF1-208	ENST00000526821	AGPAT4-IT1	Q9H0P7	198 aa		4.57	□□□□□ -1.68
ATPAF1-208	ENST00000526821	IL36B	Q9NZH7	164 aa		4.57	□□□□□ -1.68
ATPAF1-208	ENST00000526821	ATR	Q13535	2644 aa		4.57	□□□□□ -1.68
ATPAF1-208	ENST00000526821	WNK1	Q9H4A3	2382 aa		4.56	□□□□□ -1.68
ATPAF1-208	ENST00000526821	TRAV9-1	A0A075B6T8	112 aa		4.56	□□□□□ -1.68
ATPAF1-208	ENST00000526821	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.56	□□□□□ -1.68
ATPAF1-208	ENST00000526821	TRBV7-9	A0A0J9YWB2	115 aa		4.56	□□□□□ -1.68

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