RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 RIGQ13278 110 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 TWIST1Q15672 202 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 RRN3P1Q2M238 152 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 MEIG1Q5JSS6 88 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 SLC35E4Q6ICL7 350 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 AMTNQ6UX39 209 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 PDPNQ86YL7 162 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 MKXQ8IYA7 352 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 CEND1Q8N111 149 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 KIR3DL3Q8N743 410 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 GATD1Q8NB37 220 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 PIGCQ92535 297 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 PRELID3AQ96N28 172 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 RASL11BQ9BPW5 248 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 ENY2Q9NPA8 101 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 ZNF492Q9P255 531 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 PEMTQ9UBM1 199 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 IGKV1D-8A0A087WSZ0 117 aa3.96□□□□□ -1.78
CD44-218ENST00000525469 IGKV1-9A0A0C4DH69 117 aa3.96□□□□□ -1.78
CD44-218ENST00000525469 UQCRQO14949 82 aa3.96□□□□□ -1.78
CD44-218ENST00000525469 OR2H2O95918 312 aa3.96□□□□□ -1.78
CD44-218ENST00000525469 CRYAAP02489 173 aa3.96□□□□□ -1.78
CD44-218ENST00000525469 CT62P0C5K7 136 aa3.96□□□□□ -1.78
CD44-218ENST00000525469 IAPPP10997 89 aa3.96□□□□□ -1.78
CD44-218ENST00000525469 FCGR2BP31994 310 aaPredicted RBP3.96□□□□□ -1.78
CD44-218ENST00000525469 ID1P41134 155 aa3.96□□□□□ -1.78
CD44-218ENST00000525469 RPS27P42677 84 aaKnown RBP3.96□□□□□ -1.78
CD44-218ENST00000525469 EMP1P54849 157 aa3.96□□□□□ -1.78
CD44-218ENST00000525469 TIRAPP58753 221 aa3.96□□□□□ -1.78
CD44-218ENST00000525469 RPL8P62917 257 aaKnown RBP3.96□□□□□ -1.78
CD44-218ENST00000525469 TNFAIP6P98066 277 aaPredicted RBP3.96□□□□□ -1.78
CD44-218ENST00000525469 KIAA1644Q3SXP7 199 aa3.96□□□□□ -1.78
CD44-218ENST00000525469 CFAP126Q5VTH2 177 aa3.96□□□□□ -1.78
CD44-218ENST00000525469 SPATA31B1PQ5VZV4 182 aa3.96□□□□□ -1.78
CD44-218ENST00000525469 ZNF841Q6ZN19 808 aa3.96□□□□□ -1.78
CD44-218ENST00000525469 SLC25A48Q6ZT89 311 aaKnown RBP3.96□□□□□ -1.78
CD44-218ENST00000525469 DNAJA3Q96EY1 480 aa3.96□□□□□ -1.78
CD44-218ENST00000525469 LINC00479Q96M42 142 aa3.96□□□□□ -1.78
CD44-218ENST00000525469 LINC01600Q96MT4 127 aa3.96□□□□□ -1.78
CD44-218ENST00000525469 CHAC1Q9BUX1 264 aa3.96□□□□□ -1.78
CD44-218ENST00000525469 RTL8AQ9BWD3 113 aa3.96□□□□□ -1.78
CD44-218ENST00000525469 FAM234AQ9H0X4 552 aa3.96□□□□□ -1.78
CD44-218ENST00000525469 FBXL15Q9H469 300 aa3.96□□□□□ -1.78
CD44-218ENST00000525469 DYNLRB1Q9NP97 96 aa3.96□□□□□ -1.78
CD44-218ENST00000525469 TCRBV4S1A1TA0A5B7 111 aa3.95□□□□□ -1.78
CD44-218ENST00000525469 LINC01549A6NIU2 74 aa3.95□□□□□ -1.78
CD44-218ENST00000525469 NCBP2LA6PVI3 153 aaKnown RBP3.95□□□□□ -1.78
CD44-218ENST00000525469 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.95□□□□□ -1.78
CD44-218ENST00000525469 RRHO14718 337 aa3.95□□□□□ -1.78
CD44-218ENST00000525469 BRI3O95415 125 aa3.95□□□□□ -1.78
CD44-218ENST00000525469 NCR2O95944 276 aa3.95□□□□□ -1.78
CD44-218ENST00000525469 HBDP02042 147 aa3.95□□□□□ -1.78
CD44-218ENST00000525469 SCTP09683 121 aa3.95□□□□□ -1.78
CD44-218ENST00000525469 IGHV1-2P23083 117 aa3.95□□□□□ -1.78
CD44-218ENST00000525469 GATA3P23771 443 aa3.95□□□□□ -1.78
CD44-218ENST00000525469 FGF12P61328 243 aa3.95□□□□□ -1.78
CD44-218ENST00000525469 ARL16Q0P5N6 197 aa3.95□□□□□ -1.78
CD44-218ENST00000525469 FHL3Q13643 280 aa3.95□□□□□ -1.78
CD44-218ENST00000525469 WFDC2Q14508 124 aa3.95□□□□□ -1.78
CD44-218ENST00000525469 KLF17Q5JT82 389 aaPredicted RBP3.95□□□□□ -1.78
CD44-218ENST00000525469 SBSPONQ8IVN8 264 aa3.95□□□□□ -1.78
CD44-218ENST00000525469 ZNF114Q8NC26 417 aa3.95□□□□□ -1.78
CD44-218ENST00000525469 PRSS3P2Q8NHM4 247 aa3.95□□□□□ -1.78
CD44-218ENST00000525469 ST6GALNAC6Q969X2 333 aa3.95□□□□□ -1.78
CD44-218ENST00000525469 IFI27L1Q96BM0 104 aa3.95□□□□□ -1.78
CD44-218ENST00000525469 TMEM101Q96IK0 257 aa3.95□□□□□ -1.78
CD44-218ENST00000525469 ZNF414Q96IQ9 312 aa3.95□□□□□ -1.78
CD44-218ENST00000525469 PRADC1Q9BSG0 188 aa3.95□□□□□ -1.78
CD44-218ENST00000525469 PRO0461Q9UI25 63 aa3.95□□□□□ -1.78
CD44-218ENST00000525469 MPC1Q9Y5U8 109 aa3.95□□□□□ -1.78
CD44-218ENST00000525469 SLC25A15Q9Y619 301 aa3.95□□□□□ -1.78
CD44-218ENST00000525469 A0A0J9YW62 118 aa3.94□□□□□ -1.78
CD44-218ENST00000525469 ZNF816-ZNF321PA0A0X1KG74 233 aa3.94□□□□□ -1.78
CD44-218ENST00000525469 CLPSL1A2RUU4 121 aa3.94□□□□□ -1.78
CD44-218ENST00000525469 PMS2P5A8MQ11 134 aa3.94□□□□□ -1.78
CD44-218ENST00000525469 NPIPB5A8MRT5 1133 aa3.94□□□□□ -1.78
CD44-218ENST00000525469 HIGD1CA8MV81 97 aa3.94□□□□□ -1.78
CD44-218ENST00000525469 LYNX1G3V0Z9 82 aa3.94□□□□□ -1.78
CD44-218ENST00000525469 M0R135 149 aa3.94□□□□□ -1.78
CD44-218ENST00000525469 IGKV1D-16P01601 117 aa3.94□□□□□ -1.78
CD44-218ENST00000525469 MT-ATP8P03928 68 aa3.94□□□□□ -1.78
CD44-218ENST00000525469 LGALS1P09382 135 aaKnown RBP3.94□□□□□ -1.78
CD44-218ENST00000525469 LYNX1P0DP58 116 aa3.94□□□□□ -1.78
CD44-218ENST00000525469 FOXA3P55318 350 aaPredicted RBP3.94□□□□□ -1.78
CD44-218ENST00000525469 XGP55808 180 aa3.94□□□□□ -1.78
CD44-218ENST00000525469 PCBD1P61457 104 aa3.94□□□□□ -1.78
CD44-218ENST00000525469 EFNB3Q15768 340 aa3.94□□□□□ -1.78
CD44-218ENST00000525469 C12orf74Q32Q52 190 aa3.94□□□□□ -1.78
CD44-218ENST00000525469 C10orf128Q5T292 105 aa3.94□□□□□ -1.78
CD44-218ENST00000525469 KPRPQ5T749 579 aaPredicted RBP3.94□□□□□ -1.78
CD44-218ENST00000525469 FOXL2NBQ6ZUU3 175 aa3.94□□□□□ -1.78
CD44-218ENST00000525469 Q8IYB0 196 aa3.94□□□□□ -1.78
CD44-218ENST00000525469 ZCCHC24Q8N2G6 241 aaKnown RBP3.94□□□□□ -1.78
CD44-218ENST00000525469 FGFRL1Q8N441 504 aa3.94□□□□□ -1.78
CD44-218ENST00000525469 OR1L4Q8NGR5 311 aa3.94□□□□□ -1.78
CD44-218ENST00000525469 MYOZ3Q8TDC0 251 aa3.94□□□□□ -1.78
CD44-218ENST00000525469 GATAD1Q8WUU5 269 aa3.94□□□□□ -1.78
CD44-218ENST00000525469 PHLDA1Q8WV24 401 aaPredicted RBP3.94□□□□□ -1.78
CD44-218ENST00000525469 COPS9Q8WXC6 57 aa3.94□□□□□ -1.78
CD44-218ENST00000525469 ZNF799Q96GE5 643 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms