RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 GCN1Q92616 2671 aaKnown RBP11.56□□□□□ -0.56
BEST1-204ENST00000524926 ACANP16112 2415 aa11.56□□□□□ -0.56
BEST1-204ENST00000524926 KHDC1LQ5JSQ8 128 aa11.56□□□□□ -0.56
BEST1-204ENST00000524926 C18orf65Q6ZTR6 163 aa11.56□□□□□ -0.56
BEST1-204ENST00000524926 FER1L6-AS1Q8NA97 138 aa11.56□□□□□ -0.56
BEST1-204ENST00000524926 A0A1B0GW15 77 aa11.55□□□□□ -0.56
BEST1-204ENST00000524926 F6UB75 175 aa11.55□□□□□ -0.56
BEST1-204ENST00000524926 J3KRW8 73 aa11.55□□□□□ -0.56
BEST1-204ENST00000524926 Q6ZSV7 163 aa11.55□□□□□ -0.56
BEST1-204ENST00000524926 LINC00477Q96M19 166 aa11.55□□□□□ -0.56
BEST1-204ENST00000524926 PPP1R14DQ9NXH3 145 aa11.55□□□□□ -0.56
BEST1-204ENST00000524926 TFPI2P48307 235 aa11.55□□□□□ -0.56
BEST1-204ENST00000524926 SRSF2Q01130 221 aaKnown RBP11.55□□□□□ -0.56
BEST1-204ENST00000524926 HIST1H1AQ02539 215 aaPredicted RBP11.55□□□□□ -0.56
BEST1-204ENST00000524926 DEFB136Q30KP8 78 aa11.55□□□□□ -0.56
BEST1-204ENST00000524926 ESM1Q9NQ30 184 aa11.55□□□□□ -0.56
BEST1-204ENST00000524926 AKAP9Q99996 3911 aa11.54□□□□□ -0.56
BEST1-204ENST00000524926 MYO9AB2RTY4 2548 aa11.54□□□□□ -0.56
BEST1-204ENST00000524926 LOC102724200A0A096LPH7 203 aaPredicted RBP11.54□□□□□ -0.56
BEST1-204ENST00000524926 LGALS9O00182 355 aa11.54□□□□□ -0.56
BEST1-204ENST00000524926 ID1P41134 155 aa11.54□□□□□ -0.56
BEST1-204ENST00000524926 KLF5Q13887 457 aaPredicted RBP11.54□□□□□ -0.56
BEST1-204ENST00000524926 LINC01559Q495D7 138 aa11.54□□□□□ -0.56
BEST1-204ENST00000524926 REC114Q7Z4M0 266 aa11.54□□□□□ -0.56
BEST1-204ENST00000524926 ZNF575Q86XF7 245 aa11.54□□□□□ -0.56
BEST1-204ENST00000524926 KCNS1Q96KK3 526 aa11.54□□□□□ -0.56
BEST1-204ENST00000524926 OR8A1Q8NGG7 326 aa11.54□□□□□ -0.56
BEST1-204ENST00000524926 PMCHP20382 165 aa11.53□□□□□ -0.56
BEST1-204ENST00000524926 AMTP48728 403 aa11.53□□□□□ -0.56
BEST1-204ENST00000524926 DCANP1Q8TF63 244 aa11.53□□□□□ -0.56
BEST1-204ENST00000524926 MS4A6AQ9H2W1 248 aa11.53□□□□□ -0.56
BEST1-204ENST00000524926 GSN-AS1Q9NRJ2 163 aa11.53□□□□□ -0.56
BEST1-204ENST00000524926 LENEPQ9Y5L5 61 aa11.53□□□□□ -0.56
BEST1-204ENST00000524926 IGKV3D-20A0A0C4DH25 116 aa11.52□□□□□ -0.56
BEST1-204ENST00000524926 GPX1P07203 203 aa11.52□□□□□ -0.56
BEST1-204ENST00000524926 IGLC6P0CF74 106 aa11.52□□□□□ -0.56
BEST1-204ENST00000524926 SLURP1P55000 103 aa11.52□□□□□ -0.56
BEST1-204ENST00000524926 TWIST1Q15672 202 aa11.52□□□□□ -0.56
BEST1-204ENST00000524926 Q6ZQT7 251 aa11.52□□□□□ -0.56
BEST1-204ENST00000524926 C11orf21Q9P2W6 132 aa11.52□□□□□ -0.56
BEST1-204ENST00000524926 TCTEX1D4Q5JR98 221 aa11.52□□□□□ -0.57
BEST1-204ENST00000524926 OR11H1Q8NG94 326 aa11.52□□□□□ -0.57
BEST1-204ENST00000524926 CUBNO60494 3623 aa11.52□□□□□ -0.57
BEST1-204ENST00000524926 C2orf70A6NJV1 201 aa11.51□□□□□ -0.57
BEST1-204ENST00000524926 CD33P20138 364 aa11.51□□□□□ -0.57
BEST1-204ENST00000524926 NTF3P20783 257 aa11.51□□□□□ -0.57
BEST1-204ENST00000524926 CTRLP40313 264 aa11.51□□□□□ -0.57
BEST1-204ENST00000524926 PRR9Q5T870 116 aa11.51□□□□□ -0.57
BEST1-204ENST00000524926 SAMD13Q5VXD3 122 aa11.51□□□□□ -0.57
BEST1-204ENST00000524926 HIST2H2BDQ6DRA6 164 aa11.51□□□□□ -0.57
BEST1-204ENST00000524926 FAM19A2Q8N3H0 131 aa11.51□□□□□ -0.57
BEST1-204ENST00000524926 DPF1Q92782 380 aa11.51□□□□□ -0.57
BEST1-204ENST00000524926 FASNP49327 2511 aaKnown RBP11.51□□□□□ -0.57
BEST1-204ENST00000524926 SCGB1D1O95968 90 aa11.51□□□□□ -0.57
BEST1-204ENST00000524926 RNASEKQ6P5S7 137 aaKnown RBP11.51□□□□□ -0.57
BEST1-204ENST00000524926 Q6ZWC4 215 aa11.51□□□□□ -0.57
BEST1-204ENST00000524926 GATD1Q8NB37 220 aa11.51□□□□□ -0.57
BEST1-204ENST00000524926 DUX3Q96PT4 197 aa11.51□□□□□ -0.57
BEST1-204ENST00000524926 LINC01619G3V211 115 aa11.5□□□□□ -0.57
BEST1-204ENST00000524926 ZNF324O75467 553 aaPredicted RBP11.5□□□□□ -0.57
BEST1-204ENST00000524926 HSBP1O75506 76 aa11.5□□□□□ -0.57
BEST1-204ENST00000524926 ZNF493Q6ZR52 646 aa11.5□□□□□ -0.57
BEST1-204ENST00000524926 M0QZ24 198 aa11.5□□□□□ -0.57
BEST1-204ENST00000524926 ZNF688P0C7X2 276 aa11.5□□□□□ -0.57
BEST1-204ENST00000524926 S100A12P80511 92 aa11.5□□□□□ -0.57
BEST1-204ENST00000524926 NIT1Q86X76 327 aa11.5□□□□□ -0.57
BEST1-204ENST00000524926 ZFAND2AQ8N6M9 145 aa11.5□□□□□ -0.57
BEST1-204ENST00000524926 KLHL30-AS1Q8NEE0 82 aa11.5□□□□□ -0.57
BEST1-204ENST00000524926 C4orf3Q8WVX3 66 aa11.5□□□□□ -0.57
BEST1-204ENST00000524926 HECTD1Q9ULT8 2610 aa11.49□□□□□ -0.57
BEST1-204ENST00000524926 DNLZQ5SXM8 178 aa11.49□□□□□ -0.57
BEST1-204ENST00000524926 OR1N2Q8NGR9 330 aa11.49□□□□□ -0.57
BEST1-204ENST00000524926 SMR3AQ99954 134 aa11.49□□□□□ -0.57
BEST1-204ENST00000524926 NAGKQ9UJ70 344 aa11.49□□□□□ -0.57
BEST1-204ENST00000524926 PSMG4Q5JS54 123 aa11.49□□□□□ -0.57
BEST1-204ENST00000524926 AMN1Q8IY45 258 aa11.49□□□□□ -0.57
BEST1-204ENST00000524926 MSRB1Q9NZV6 116 aa11.49□□□□□ -0.57
BEST1-204ENST00000524926 RNASE4P34096 147 aaKnown RBP11.48□□□□□ -0.57
BEST1-204ENST00000524926 SNRPD3P62318 126 aaKnown RBP11.48□□□□□ -0.57
BEST1-204ENST00000524926 C11orf44Q8N8P7 122 aa11.48□□□□□ -0.57
BEST1-204ENST00000524926 TRAV21A0A0B4J279 112 aa11.48□□□□□ -0.57
BEST1-204ENST00000524926 SCGB2A2Q13296 93 aa11.48□□□□□ -0.57
BEST1-204ENST00000524926 ANK3Q12955 4377 aaKnown RBP11.47□□□□□ -0.57
BEST1-204ENST00000524926 FAM104BQ5XKR9 115 aa11.47□□□□□ -0.57
BEST1-204ENST00000524926 WFDC12Q8WWY7 111 aa11.47□□□□□ -0.57
BEST1-204ENST00000524926 FAM19A4Q96LR4 140 aa11.47□□□□□ -0.57
BEST1-204ENST00000524926 K7EQG2 157 aa11.47□□□□□ -0.57
BEST1-204ENST00000524926 CSN3P07498 182 aa11.47□□□□□ -0.57
BEST1-204ENST00000524926 KRTDAPP60985 99 aa11.47□□□□□ -0.57
BEST1-204ENST00000524926 KIR3DS1Q14943 382 aa11.47□□□□□ -0.57
BEST1-204ENST00000524926 URB1-AS1Q96HZ7 61 aa11.47□□□□□ -0.57
BEST1-204ENST00000524926 NF1P21359 2839 aa11.47□□□□□ -0.57
BEST1-204ENST00000524926 M0R2Z0 102 aa11.46□□□□□ -0.57
BEST1-204ENST00000524926 ADAMTSL5Q6ZMM2 481 aa11.46□□□□□ -0.57
BEST1-204ENST00000524926 CNFNQ9BYD5 112 aa11.46□□□□□ -0.57
BEST1-204ENST00000524926 PEMTQ9UBM1 199 aa11.46□□□□□ -0.57
BEST1-204ENST00000524926 D6R8Y8 96 aa11.46□□□□□ -0.58
BEST1-204ENST00000524926 LINC00614P0C842 121 aa11.46□□□□□ -0.58
BEST1-204ENST00000524926 RNASE1P07998 156 aaKnown RBP11.45□□□□□ -0.58
BEST1-204ENST00000524926 OR9G4Q8NGQ1 327 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms