RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-208ENST00000524533 HHLA3Q9XRX5 114 aa11.12□□□□□ -0.63
HIF3A-208ENST00000524533 E5RGE8 158 aa11.11□□□□□ -0.63
HIF3A-208ENST00000524533 OR7C2O60412 319 aa11.11□□□□□ -0.63
HIF3A-208ENST00000524533 SIX6O95475 246 aa11.11□□□□□ -0.63
HIF3A-208ENST00000524533 CSN1S1P47710 185 aa11.11□□□□□ -0.63
HIF3A-208ENST00000524533 FHL2Q14192 279 aa11.11□□□□□ -0.63
HIF3A-208ENST00000524533 MRPL23Q16540 153 aaKnown RBP11.11□□□□□ -0.63
HIF3A-208ENST00000524533 LRRC37A5PQ49AS3 106 aa11.11□□□□□ -0.63
HIF3A-208ENST00000524533 MUC21Q5SSG8 566 aa11.11□□□□□ -0.63
HIF3A-208ENST00000524533 WDR61Q9GZS3 305 aaKnown RBP11.11□□□□□ -0.63
HIF3A-208ENST00000524533 OR5AC2Q9NZP5 309 aa11.11□□□□□ -0.63
HIF3A-208ENST00000524533 TRGV4A0A0C4DH28 118 aa11.1□□□□□ -0.63
HIF3A-208ENST00000524533 RBAKDNA6NC62 111 aa11.1□□□□□ -0.63
HIF3A-208ENST00000524533 C17orf112F2Z3M2 114 aa11.1□□□□□ -0.63
HIF3A-208ENST00000524533 PRAF2O60831 178 aa11.1□□□□□ -0.63
HIF3A-208ENST00000524533 ASAH1Q13510 395 aa11.1□□□□□ -0.63
HIF3A-208ENST00000524533 LYPD5Q6UWN5 251 aa11.1□□□□□ -0.63
HIF3A-208ENST00000524533 NEGR1Q7Z3B1 354 aa11.1□□□□□ -0.63
HIF3A-208ENST00000524533 PGPEP1Q9NXJ5 209 aa11.1□□□□□ -0.63
HIF3A-208ENST00000524533 PTTG2Q9NZH5 202 aa11.1□□□□□ -0.63
HIF3A-208ENST00000524533 RANP62826 216 aaKnown RBP11.09□□□□□ -0.63
HIF3A-208ENST00000524533 UBE2L3P68036 154 aaKnown RBP11.09□□□□□ -0.63
HIF3A-208ENST00000524533 ZNF266Q14584 549 aa11.09□□□□□ -0.63
HIF3A-208ENST00000524533 NFE4Q86UQ8 179 aa11.09□□□□□ -0.63
HIF3A-208ENST00000524533 ENKURQ8TC29 256 aa11.09□□□□□ -0.63
HIF3A-208ENST00000524533 NMES1Q9C002 83 aa11.09□□□□□ -0.63
HIF3A-208ENST00000524533 SRIP30626 198 aa11.08□□□□□ -0.64
HIF3A-208ENST00000524533 CDPF1Q6NVV7 123 aa11.08□□□□□ -0.64
HIF3A-208ENST00000524533 LYPD1Q8N2G4 141 aa11.08□□□□□ -0.64
HIF3A-208ENST00000524533 PCNPQ8WW12 178 aaKnown RBP11.08□□□□□ -0.64
HIF3A-208ENST00000524533 MDFICQ9P1T7 246 aa11.08□□□□□ -0.64
HIF3A-208ENST00000524533 TNFRSF18Q9Y5U5 241 aa11.08□□□□□ -0.64
HIF3A-208ENST00000524533 LY96Q9Y6Y9 160 aa11.08□□□□□ -0.64
HIF3A-208ENST00000524533 TRGV11A0A075B6L2 103 aa11.07□□□□□ -0.64
HIF3A-208ENST00000524533 TRAV9-2A0A087WT02 112 aa11.07□□□□□ -0.64
HIF3A-208ENST00000524533 H0YIZ8 118 aa11.07□□□□□ -0.64
HIF3A-208ENST00000524533 SFTA3P0C7M3 94 aa11.07□□□□□ -0.64
HIF3A-208ENST00000524533 FUSP35637 526 aaKnown RBP eCLIP11.07□□□□□ -0.64
HIF3A-208ENST00000524533 TMEM183BQ1AE95 376 aa11.07□□□□□ -0.64
HIF3A-208ENST00000524533 KHDC3LQ587J8 217 aa11.07□□□□□ -0.64
HIF3A-208ENST00000524533 Q6AWC8 147 aa11.07□□□□□ -0.64
HIF3A-208ENST00000524533 FAM159AQ6UWV7 190 aa11.07□□□□□ -0.64
HIF3A-208ENST00000524533 TMEM183AQ8IXX5 376 aa11.07□□□□□ -0.64
HIF3A-208ENST00000524533 OR10G4Q8NGN3 311 aa11.07□□□□□ -0.64
HIF3A-208ENST00000524533 ZNF479Q96JC4 524 aa11.07□□□□□ -0.64
HIF3A-208ENST00000524533 ATP5SQ99766 215 aa11.07□□□□□ -0.64
HIF3A-208ENST00000524533 SPXQ9BT56 116 aa11.07□□□□□ -0.64
HIF3A-208ENST00000524533 EPM2AB3EWF7 344 aa11.06□□□□□ -0.64
HIF3A-208ENST00000524533 K7EQD1 137 aa11.06□□□□□ -0.64
HIF3A-208ENST00000524533 DNAH10OSP0CZ25 163 aa11.06□□□□□ -0.64
HIF3A-208ENST00000524533 CYCSP99999 105 aaKnown RBP11.06□□□□□ -0.64
HIF3A-208ENST00000524533 FFAR4Q5NUL3 377 aa11.06□□□□□ -0.64
HIF3A-208ENST00000524533 WFDC10BQ8IUB3 73 aa11.06□□□□□ -0.64
HIF3A-208ENST00000524533 S100ZQ8WXG8 99 aa11.06□□□□□ -0.64
HIF3A-208ENST00000524533 LENEPQ9Y5L5 61 aa11.06□□□□□ -0.64
HIF3A-208ENST00000524533 DIRC3C9JPN6 131 aa11.05□□□□□ -0.64
HIF3A-208ENST00000524533 ORM1P02763 201 aa11.05□□□□□ -0.64
HIF3A-208ENST00000524533 GYPEP15421 78 aa11.05□□□□□ -0.64
HIF3A-208ENST00000524533 TAS2R45P59539 299 aa11.05□□□□□ -0.64
HIF3A-208ENST00000524533 LINC00299Q6ZSB3 139 aa11.05□□□□□ -0.64
HIF3A-208ENST00000524533 IQCF2Q8IXL9 164 aa11.05□□□□□ -0.64
HIF3A-208ENST00000524533 RASL10AQ92737 203 aa11.05□□□□□ -0.64
HIF3A-208ENST00000524533 NAGKQ9UJ70 344 aa11.05□□□□□ -0.64
HIF3A-208ENST00000524533 A0A087WTM6 91 aa11.04□□□□□ -0.64
HIF3A-208ENST00000524533 K7EP13 123 aa11.04□□□□□ -0.64
HIF3A-208ENST00000524533 EVI2AP22794 236 aa11.04□□□□□ -0.64
HIF3A-208ENST00000524533 HYLS1Q96M11 299 aa11.04□□□□□ -0.64
HIF3A-208ENST00000524533 MSRB1Q9NZV6 116 aa11.04□□□□□ -0.64
HIF3A-208ENST00000524533 RPH3ALQ9UNE2 315 aa11.04□□□□□ -0.64
HIF3A-208ENST00000524533 TRAV4A0A0B4J268 109 aa11.03□□□□□ -0.64
HIF3A-208ENST00000524533 C9JCJ5 164 aa11.03□□□□□ -0.64
HIF3A-208ENST00000524533 CMTM2Q8TAZ6 248 aa11.03□□□□□ -0.64
HIF3A-208ENST00000524533 PPP1R1CQ8WVI7 109 aa11.03□□□□□ -0.64
HIF3A-208ENST00000524533 TMED6Q8WW62 240 aa11.03□□□□□ -0.64
HIF3A-208ENST00000524533 TXNDC17Q9BRA2 123 aa11.03□□□□□ -0.64
HIF3A-208ENST00000524533 HSPB11Q9Y547 144 aa11.03□□□□□ -0.64
HIF3A-208ENST00000524533 IFNA5P01569 189 aa11.02□□□□□ -0.65
HIF3A-208ENST00000524533 PET100P0DJ07 73 aa11.02□□□□□ -0.65
HIF3A-208ENST00000524533 H2BFSP57053 126 aa11.02□□□□□ -0.65
HIF3A-208ENST00000524533 TDRG1Q3Y452 100 aa11.02□□□□□ -0.65
HIF3A-208ENST00000524533 FAM74A1Q5RGS3 127 aa11.02□□□□□ -0.65
HIF3A-208ENST00000524533 SCGB1C1Q8TD33 95 aa11.02□□□□□ -0.65
HIF3A-208ENST00000524533 SMIM3Q9BZL3 60 aa11.02□□□□□ -0.65
HIF3A-208ENST00000524533 OTORQ9NRC9 128 aa11.02□□□□□ -0.65
HIF3A-208ENST00000524533 INMT-MINDY4F8WBC2 141 aa11.01□□□□□ -0.65
HIF3A-208ENST00000524533 EIF3GO75821 320 aaKnown RBP eCLIP11.01□□□□□ -0.65
HIF3A-208ENST00000524533 UPK1BO75841 260 aa11.01□□□□□ -0.65
HIF3A-208ENST00000524533 XGP55808 180 aa11.01□□□□□ -0.65
HIF3A-208ENST00000524533 OR4C5Q8NGB2 326 aa11.01□□□□□ -0.65
HIF3A-208ENST00000524533 TRAV21A0A0B4J279 112 aa11□□□□□ -0.65
HIF3A-208ENST00000524533 PGPA6NDG6 321 aa11□□□□□ -0.65
HIF3A-208ENST00000524533 M0R2P5 195 aa11□□□□□ -0.65
HIF3A-208ENST00000524533 MPC2O95563 127 aa11□□□□□ -0.65
HIF3A-208ENST00000524533 CRYGDP07320 174 aa11□□□□□ -0.65
HIF3A-208ENST00000524533 KRTAP10-1P60331 282 aa11□□□□□ -0.65
HIF3A-208ENST00000524533 GOLT1AQ6ZVE7 132 aa11□□□□□ -0.65
HIF3A-208ENST00000524533 C10orf126Q8N4M7 172 aa11□□□□□ -0.65
HIF3A-208ENST00000524533 MBD2Q9UBB5 411 aa11□□□□□ -0.65
HIF3A-208ENST00000524533 IGHV3-16A0A0C4DH30 117 aa10.99□□□□□ -0.65
HIF3A-208ENST00000524533 LOC100131303A0A0U1RQF7 123 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms