RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 SLURP1P55000 103 aa12.71□□□□□ -0.38
SREK1-212ENST00000522912 KLF5Q13887 457 aaPredicted RBP12.71□□□□□ -0.38
SREK1-212ENST00000522912 OR10J3Q5JRS4 329 aa12.71□□□□□ -0.38
SREK1-212ENST00000522912 NF1P21359 2839 aa12.71□□□□□ -0.38
SREK1-212ENST00000522912 F6UB75 175 aa12.7□□□□□ -0.38
SREK1-212ENST00000522912 RPS20P60866 119 aaKnown RBP12.7□□□□□ -0.38
SREK1-212ENST00000522912 RIGQ13278 110 aa12.7□□□□□ -0.38
SREK1-212ENST00000522912 WFDC3Q8IUB2 231 aa12.7□□□□□ -0.38
SREK1-212ENST00000522912 OR10J6PQ8NGY7 276 aa12.7□□□□□ -0.38
SREK1-212ENST00000522912 TMEM18Q96B42 140 aa12.7□□□□□ -0.38
SREK1-212ENST00000522912 LINC00477Q96M19 166 aa12.7□□□□□ -0.38
SREK1-212ENST00000522912 C11orf21Q9P2W6 132 aa12.7□□□□□ -0.38
SREK1-212ENST00000522912 C2orf70A6NJV1 201 aa12.69□□□□□ -0.38
SREK1-212ENST00000522912 ESDP10768 282 aa12.69□□□□□ -0.38
SREK1-212ENST00000522912 LINC01559Q495D7 138 aa12.69□□□□□ -0.38
SREK1-212ENST00000522912 C4orf3Q8WVX3 66 aa12.69□□□□□ -0.38
SREK1-212ENST00000522912 ALKBH7Q9BT30 221 aaPredicted RBP12.69□□□□□ -0.38
SREK1-212ENST00000522912 MS4A6AQ9H2W1 248 aa12.69□□□□□ -0.38
SREK1-212ENST00000522912 NIT2Q9NQR4 276 aa12.69□□□□□ -0.38
SREK1-212ENST00000522912 IGLC6P0CF74 106 aa12.69□□□□□ -0.38
SREK1-212ENST00000522912 HIST1H1AQ02539 215 aaPredicted RBP12.69□□□□□ -0.38
SREK1-212ENST00000522912 PRR9Q5T870 116 aa12.69□□□□□ -0.38
SREK1-212ENST00000522912 ADAMTSL5Q6ZMM2 481 aa12.69□□□□□ -0.38
SREK1-212ENST00000522912 Q6ZQT7 251 aa12.69□□□□□ -0.38
SREK1-212ENST00000522912 OR8A1Q8NGG7 326 aa12.69□□□□□ -0.38
SREK1-212ENST00000522912 C18orf32Q8TCD1 76 aa12.69□□□□□ -0.38
SREK1-212ENST00000522912 RCHY1Q96PM5 261 aa12.69□□□□□ -0.38
SREK1-212ENST00000522912 LENEPQ9Y5L5 61 aa12.69□□□□□ -0.38
SREK1-212ENST00000522912 IQCJQ1A5X6 159 aa12.68□□□□□ -0.38
SREK1-212ENST00000522912 KHDC1LQ5JSQ8 128 aa12.68□□□□□ -0.38
SREK1-212ENST00000522912 GATD1Q8NB37 220 aa12.68□□□□□ -0.38
SREK1-212ENST00000522912 OR11H1Q8NG94 326 aa12.68□□□□□ -0.38
SREK1-212ENST00000522912 DUX3Q96PT4 197 aa12.68□□□□□ -0.38
SREK1-212ENST00000522912 MTORP42345 2549 aa12.68□□□□□ -0.38
SREK1-212ENST00000522912 IGKV3D-20A0A0C4DH25 116 aa12.67□□□□□ -0.38
SREK1-212ENST00000522912 LINC01619G3V211 115 aa12.67□□□□□ -0.38
SREK1-212ENST00000522912 RNASE1P07998 156 aaKnown RBP12.67□□□□□ -0.38
SREK1-212ENST00000522912 ID1P41134 155 aa12.67□□□□□ -0.38
SREK1-212ENST00000522912 CDPF1Q6NVV7 123 aa12.67□□□□□ -0.38
SREK1-212ENST00000522912 ZFAND2AQ8N6M9 145 aa12.67□□□□□ -0.38
SREK1-212ENST00000522912 FER1L6-AS1Q8NA97 138 aa12.67□□□□□ -0.38
SREK1-212ENST00000522912 TMEM160Q9NX00 188 aa12.67□□□□□ -0.38
SREK1-212ENST00000522912 MUC21A0A0G2JKD1 596 aa12.67□□□□□ -0.38
SREK1-212ENST00000522912 MUC21A0A140T8X8 626 aa12.67□□□□□ -0.38
SREK1-212ENST00000522912 CTRLP40313 264 aa12.67□□□□□ -0.38
SREK1-212ENST00000522912 TFPI2P48307 235 aa12.67□□□□□ -0.38
SREK1-212ENST00000522912 MUC21Q5SSG8 566 aa12.67□□□□□ -0.38
SREK1-212ENST00000522912 LOC102724200A0A096LPH7 203 aaPredicted RBP12.66□□□□□ -0.38
SREK1-212ENST00000522912 A0A1B0GW15 77 aa12.66□□□□□ -0.38
SREK1-212ENST00000522912 SSTP61278 116 aa12.66□□□□□ -0.38
SREK1-212ENST00000522912 KLHL30-AS1Q8NEE0 82 aa12.66□□□□□ -0.38
SREK1-212ENST00000522912 OR1N2Q8NGR9 330 aa12.66□□□□□ -0.38
SREK1-212ENST00000522912 BORCS7Q96B45 105 aa12.66□□□□□ -0.38
SREK1-212ENST00000522912 FAM19A4Q96LR4 140 aa12.66□□□□□ -0.38
SREK1-212ENST00000522912 SAMD13Q5VXD3 122 aa12.66□□□□□ -0.38
SREK1-212ENST00000522912 J3KRW8 73 aa12.65□□□□□ -0.38
SREK1-212ENST00000522912 K7EQG2 157 aa12.65□□□□□ -0.38
SREK1-212ENST00000522912 LY6G6DO95868 133 aa12.65□□□□□ -0.38
SREK1-212ENST00000522912 SCGB2A2Q13296 93 aa12.65□□□□□ -0.38
SREK1-212ENST00000522912 DPF1Q92782 380 aa12.65□□□□□ -0.38
SREK1-212ENST00000522912 ZNF493Q6ZR52 646 aa12.64□□□□□ -0.39
SREK1-212ENST00000522912 ZNF688P0C7X2 276 aa12.64□□□□□ -0.39
SREK1-212ENST00000522912 PAFAH1B2P68402 229 aa12.64□□□□□ -0.39
SREK1-212ENST00000522912 LINC01006Q8NI28 216 aa12.64□□□□□ -0.39
SREK1-212ENST00000522912 KIR3DS1Q14943 382 aa12.63□□□□□ -0.39
SREK1-212ENST00000522912 JOSD1Q15040 202 aaPredicted RBP12.63□□□□□ -0.39
SREK1-212ENST00000522912 C11orf44Q8N8P7 122 aa12.63□□□□□ -0.39
SREK1-212ENST00000522912 ZNF418Q8TF45 676 aaPredicted RBP12.63□□□□□ -0.39
SREK1-212ENST00000522912 DLX4Q92988 240 aaPredicted RBP12.63□□□□□ -0.39
SREK1-212ENST00000522912 KCNS1Q96KK3 526 aa12.63□□□□□ -0.39
SREK1-212ENST00000522912 C16orf95Q9H693 158 aa12.63□□□□□ -0.39
SREK1-212ENST00000522912 OTOGQ6ZRI0 2925 aa12.63□□□□□ -0.39
SREK1-212ENST00000522912 NOTCH2Q04721 2471 aa12.63□□□□□ -0.39
SREK1-212ENST00000522912 CD28P10747 220 aa12.62□□□□□ -0.39
SREK1-212ENST00000522912 NTF3P20783 257 aa12.62□□□□□ -0.39
SREK1-212ENST00000522912 HILS1P60008 231 aa12.62□□□□□ -0.39
SREK1-212ENST00000522912 PSMG4Q5JS54 123 aa12.62□□□□□ -0.39
SREK1-212ENST00000522912 M0QZ24 198 aa12.62□□□□□ -0.39
SREK1-212ENST00000522912 APRG1Q8IVJ8 170 aa12.62□□□□□ -0.39
SREK1-212ENST00000522912 OR9G4Q8NGQ1 327 aa12.62□□□□□ -0.39
SREK1-212ENST00000522912 WFDC12Q8WWY7 111 aa12.62□□□□□ -0.39
SREK1-212ENST00000522912 CNFNQ9BYD5 112 aa12.62□□□□□ -0.39
SREK1-212ENST00000522912 HIVEP2P31629 2446 aa12.61□□□□□ -0.39
SREK1-212ENST00000522912 TRBV7-9A0A0J9YWB2 115 aa12.61□□□□□ -0.39
SREK1-212ENST00000522912 GPX1P07203 203 aa12.61□□□□□ -0.39
SREK1-212ENST00000522912 CD33P20138 364 aa12.61□□□□□ -0.39
SREK1-212ENST00000522912 TWIST1Q15672 202 aa12.61□□□□□ -0.39
SREK1-212ENST00000522912 SAMD10Q9BYL1 202 aa12.61□□□□□ -0.39
SREK1-212ENST00000522912 MSRB1Q9NZV6 116 aa12.61□□□□□ -0.39
SREK1-212ENST00000522912 RNASE4P34096 147 aaKnown RBP12.61□□□□□ -0.39
SREK1-212ENST00000522912 SNRPD3P62318 126 aaKnown RBP12.61□□□□□ -0.39
SREK1-212ENST00000522912 Q6ZWC4 215 aa12.61□□□□□ -0.39
SREK1-212ENST00000522912 URB1-AS1Q96HZ7 61 aa12.61□□□□□ -0.39
SREK1-212ENST00000522912 RAX2Q96IS3 184 aa12.61□□□□□ -0.39
SREK1-212ENST00000522912 SORL1Q92673 2214 aa12.6□□□□□ -0.39
SREK1-212ENST00000522912 CSN3P07498 182 aa12.6□□□□□ -0.39
SREK1-212ENST00000522912 FAM104BQ5XKR9 115 aa12.6□□□□□ -0.39
SREK1-212ENST00000522912 GSN-AS1Q9NRJ2 163 aa12.6□□□□□ -0.39
SREK1-212ENST00000522912 PEMTQ9UBM1 199 aa12.6□□□□□ -0.39
SREK1-212ENST00000522912 AGRNO00468 2067 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms