RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 SAPCD1Q5SSQ6 148 aa9.47□□□□□ -0.89
PABPC1-205ENST00000518196 Q8TAT8 98 aa9.47□□□□□ -0.89
PABPC1-205ENST00000518196 RNF183Q96D59 192 aa9.47□□□□□ -0.89
PABPC1-205ENST00000518196 LINC00479Q96M42 142 aa9.47□□□□□ -0.89
PABPC1-205ENST00000518196 TM2D3Q9BRN9 247 aa9.47□□□□□ -0.89
PABPC1-205ENST00000518196 GOLT1BQ9Y3E0 138 aa9.47□□□□□ -0.89
PABPC1-205ENST00000518196 TRAV12-2A0A075B6T6 113 aa9.46□□□□□ -0.9
PABPC1-205ENST00000518196 IGLV2-11P01706 119 aa9.46□□□□□ -0.9
PABPC1-205ENST00000518196 TMEM183BQ1AE95 376 aa9.46□□□□□ -0.9
PABPC1-205ENST00000518196 CLLU1Q5K131 121 aa9.46□□□□□ -0.9
PABPC1-205ENST00000518196 CSNK1G2-AS1Q8NCQ2 148 aa9.46□□□□□ -0.9
PABPC1-205ENST00000518196 C11orf52Q96A22 123 aa9.46□□□□□ -0.9
PABPC1-205ENST00000518196 C20orf144Q9BQM9 153 aa9.46□□□□□ -0.9
PABPC1-205ENST00000518196 TREM1Q9NP99 234 aa9.46□□□□□ -0.9
PABPC1-205ENST00000518196 MED9Q9NWA0 146 aa9.46□□□□□ -0.9
PABPC1-205ENST00000518196 KLF12Q9Y4X4 402 aa9.46□□□□□ -0.9
PABPC1-205ENST00000518196 MEGF8Q7Z7M0 2845 aa9.45□□□□□ -0.9
PABPC1-205ENST00000518196 TRBV6-1A0A0K0K1D8 114 aa9.45□□□□□ -0.9
PABPC1-205ENST00000518196 C7orf71A4D174 169 aa9.45□□□□□ -0.9
PABPC1-205ENST00000518196 KLLNB2CW77 178 aa9.45□□□□□ -0.9
PABPC1-205ENST00000518196 CRXO43186 299 aaPredicted RBP9.45□□□□□ -0.9
PABPC1-205ENST00000518196 NDUFS6O75380 124 aaKnown RBP9.45□□□□□ -0.9
PABPC1-205ENST00000518196 RNASE4P34096 147 aaKnown RBP9.45□□□□□ -0.9
PABPC1-205ENST00000518196 TMEM256Q8N2U0 113 aa9.45□□□□□ -0.9
PABPC1-205ENST00000518196 ZFAND2AQ8N6M9 145 aa9.45□□□□□ -0.9
PABPC1-205ENST00000518196 C2CD4CQ8TF44 421 aa9.45□□□□□ -0.9
PABPC1-205ENST00000518196 OVOL2Q9BRP0 275 aa9.45□□□□□ -0.9
PABPC1-205ENST00000518196 NIPSNAP3BQ9BS92 247 aa9.45□□□□□ -0.9
PABPC1-205ENST00000518196 TMEM208Q9BTX3 173 aa9.45□□□□□ -0.9
PABPC1-205ENST00000518196 ZFP30Q9Y2G7 519 aa9.45□□□□□ -0.9
PABPC1-205ENST00000518196 TRAV12-3A0A0B4J271 114 aa9.44□□□□□ -0.9
PABPC1-205ENST00000518196 TMEM250H0YL14 139 aa9.44□□□□□ -0.9
PABPC1-205ENST00000518196 TAS2R60P59551 318 aa9.44□□□□□ -0.9
PABPC1-205ENST00000518196 PEA15Q15121 130 aa9.44□□□□□ -0.9
PABPC1-205ENST00000518196 SMUG1Q53HV7 270 aa9.44□□□□□ -0.9
PABPC1-205ENST00000518196 GFI1BQ5VTD9 330 aa9.44□□□□□ -0.9
PABPC1-205ENST00000518196 Q86TA4 180 aa9.44□□□□□ -0.9
PABPC1-205ENST00000518196 OR11H2Q8NH07 326 aa9.44□□□□□ -0.9
PABPC1-205ENST00000518196 LINC01587Q99440 93 aa9.44□□□□□ -0.9
PABPC1-205ENST00000518196 RETNQ9HD89 108 aa9.44□□□□□ -0.9
PABPC1-205ENST00000518196 IGHV3OR16-12A0A075B7B8 117 aa9.43□□□□□ -0.9
PABPC1-205ENST00000518196 RPL35P42766 123 aaKnown RBP9.43□□□□□ -0.9
PABPC1-205ENST00000518196 BTN1A1Q13410 526 aa9.43□□□□□ -0.9
PABPC1-205ENST00000518196 BAGE2Q86Y30 109 aa9.43□□□□□ -0.9
PABPC1-205ENST00000518196 C1orf158Q8N1D5 194 aa9.43□□□□□ -0.9
PABPC1-205ENST00000518196 TVP23CQ96ET8 276 aa9.43□□□□□ -0.9
PABPC1-205ENST00000518196 C8orf49Q96NF6 230 aa9.43□□□□□ -0.9
PABPC1-205ENST00000518196 SMDT1Q9H4I9 107 aa9.43□□□□□ -0.9
PABPC1-205ENST00000518196 FBN3Q75N90 2809 aa9.43□□□□□ -0.9
PABPC1-205ENST00000518196 SMIM9A6NGZ8 99 aa9.42□□□□□ -0.9
PABPC1-205ENST00000518196 H7BYZ3 331 aa9.42□□□□□ -0.9
PABPC1-205ENST00000518196 ZNF561-AS1K7EIQ3 104 aa9.42□□□□□ -0.9
PABPC1-205ENST00000518196 LTAP01374 205 aa9.42□□□□□ -0.9
PABPC1-205ENST00000518196 ZNF705AQ6ZN79 300 aaPredicted RBP9.42□□□□□ -0.9
PABPC1-205ENST00000518196 NEU1Q99519 415 aa9.42□□□□□ -0.9
PABPC1-205ENST00000518196 TRAV21A0A0B4J279 112 aa9.41□□□□□ -0.9
PABPC1-205ENST00000518196 RAB19A4D1S5 217 aa9.41□□□□□ -0.9
PABPC1-205ENST00000518196 ZNF324O75467 553 aaPredicted RBP9.41□□□□□ -0.9
PABPC1-205ENST00000518196 GCGP01275 180 aa9.41□□□□□ -0.9
PABPC1-205ENST00000518196 SRP19P09132 144 aaKnown RBP9.41□□□□□ -0.9
PABPC1-205ENST00000518196 CEBPGP53567 150 aa9.41□□□□□ -0.9
PABPC1-205ENST00000518196 PRR9Q5T870 116 aa9.41□□□□□ -0.9
PABPC1-205ENST00000518196 Q6AWC8 147 aa9.41□□□□□ -0.9
PABPC1-205ENST00000518196 TMEM183AQ8IXX5 376 aa9.41□□□□□ -0.9
PABPC1-205ENST00000518196 PYGO2Q9BRQ0 406 aa9.41□□□□□ -0.9
PABPC1-205ENST00000518196 DERL1Q9BUN8 251 aa9.41□□□□□ -0.9
PABPC1-205ENST00000518196 PLA2G2DQ9UNK4 145 aa9.41□□□□□ -0.9
PABPC1-205ENST00000518196 RBMY1A1P0DJD3 496 aaKnown RBP9.4□□□□□ -0.9
PABPC1-205ENST00000518196 RBMY1CP0DJD4 496 aa9.4□□□□□ -0.9
PABPC1-205ENST00000518196 MIFP14174 115 aa9.4□□□□□ -0.9
PABPC1-205ENST00000518196 GNG4P50150 75 aa9.4□□□□□ -0.9
PABPC1-205ENST00000518196 RBMY1FQ15415 496 aaKnown RBP9.4□□□□□ -0.9
PABPC1-205ENST00000518196 RRN3P1Q2M238 152 aa9.4□□□□□ -0.9
PABPC1-205ENST00000518196 ZNF674Q2M3X9 581 aa9.4□□□□□ -0.9
PABPC1-205ENST00000518196 COX8CQ7Z4L0 72 aa9.4□□□□□ -0.9
PABPC1-205ENST00000518196 PARLQ9H300 379 aa9.4□□□□□ -0.9
PABPC1-205ENST00000518196 U3KQK5 164 aa9.4□□□□□ -0.9
PABPC1-205ENST00000518196 FABP5P3A8MUU1 101 aa9.39□□□□□ -0.91
PABPC1-205ENST00000518196 PFN1P07737 140 aaKnown RBP9.39□□□□□ -0.91
PABPC1-205ENST00000518196 HTN1P15515 57 aa9.39□□□□□ -0.91
PABPC1-205ENST00000518196 CENPWQ5EE01 88 aa9.39□□□□□ -0.91
PABPC1-205ENST00000518196 SMIM12Q96EX1 92 aa9.39□□□□□ -0.91
PABPC1-205ENST00000518196 IGHV1OR15-1A0A075B7D0 117 aa9.38□□□□□ -0.91
PABPC1-205ENST00000518196 ZNF705GA8MUZ8 300 aaPredicted RBP9.38□□□□□ -0.91
PABPC1-205ENST00000518196 ZNF80P51504 273 aaPredicted RBP9.38□□□□□ -0.91
PABPC1-205ENST00000518196 SRSF3P84103 164 aaKnown RBP9.38□□□□□ -0.91
PABPC1-205ENST00000518196 FAM159AQ6UWV7 190 aa9.38□□□□□ -0.91
PABPC1-205ENST00000518196 EIF4E3Q8N5X7 224 aaKnown RBP9.38□□□□□ -0.91
PABPC1-205ENST00000518196 NHLRC2Q8NBF2 726 aa9.38□□□□□ -0.91
PABPC1-205ENST00000518196 ZC2HC1AQ96GY0 325 aa9.38□□□□□ -0.91
PABPC1-205ENST00000518196 LINC00467Q9BRT7 94 aa9.38□□□□□ -0.91
PABPC1-205ENST00000518196 MLST8Q9BVC4 326 aa9.38□□□□□ -0.91
PABPC1-205ENST00000518196 BIN3Q9NQY0 253 aa9.38□□□□□ -0.91
PABPC1-205ENST00000518196 TMEM189A5PLL7 270 aa9.37□□□□□ -0.91
PABPC1-205ENST00000518196 CBY3A6NI87 242 aa9.37□□□□□ -0.91
PABPC1-205ENST00000518196 C9JCJ5 164 aa9.37□□□□□ -0.91
PABPC1-205ENST00000518196 MGST1P10620 155 aaKnown RBP9.37□□□□□ -0.91
PABPC1-205ENST00000518196 FAM74A3Q4VXF1 159 aa9.37□□□□□ -0.91
PABPC1-205ENST00000518196 FAM162BQ5T6X4 162 aa9.37□□□□□ -0.91
PABPC1-205ENST00000518196 ZNF493Q6ZR52 646 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms