RNA–Protein interactions for RNA: ENST00000517785.1

LINC00535-202, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 264 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-202ENST00000517785 KRTAP2-2Q9BYT5 123 aa3.54□□□□□ -1.84
LINC00535-202ENST00000517785 AGPAT4-IT1Q9H0P7 198 aa3.54□□□□□ -1.84
LINC00535-202ENST00000517785 GTSF1LQ9H1H1 148 aa3.54□□□□□ -1.84
LINC00535-202ENST00000517785 KLK12Q9UKR0 248 aa3.54□□□□□ -1.84
LINC00535-202ENST00000517785 C14orf166Q9Y224 244 aaKnown RBP3.54□□□□□ -1.84
LINC00535-202ENST00000517785 IGKV2-40A0A087WW87 121 aaPredicted RBP3.53□□□□□ -1.84
LINC00535-202ENST00000517785 A0A087WYN8 130 aa3.53□□□□□ -1.84
LINC00535-202ENST00000517785 C5orf51A6NDU8 294 aa3.53□□□□□ -1.84
LINC00535-202ENST00000517785 FABP12A6NFH5 140 aa3.53□□□□□ -1.84
LINC00535-202ENST00000517785 USP17L23D6RBM5 183 aa3.53□□□□□ -1.84
LINC00535-202ENST00000517785 B3GALNT1O75752 331 aa3.53□□□□□ -1.84
LINC00535-202ENST00000517785 IGKV2D-40P01614 121 aaPredicted RBP3.53□□□□□ -1.84
LINC00535-202ENST00000517785 HLA-DQA1P01909 254 aa3.53□□□□□ -1.84
LINC00535-202ENST00000517785 PRSS1P07477 247 aa3.53□□□□□ -1.84
LINC00535-202ENST00000517785 OR10J4P0C629 311 aa3.53□□□□□ -1.84
LINC00535-202ENST00000517785 CCR6P51684 374 aa3.53□□□□□ -1.84
LINC00535-202ENST00000517785 RRAS2P62070 204 aaPredicted RBP3.53□□□□□ -1.84
LINC00535-202ENST00000517785 PRR3P79522 188 aaKnown RBP3.53□□□□□ -1.84
LINC00535-202ENST00000517785 SLC38A11Q08AI6 406 aa3.53□□□□□ -1.84
LINC00535-202ENST00000517785 C14orf177Q52M58 125 aa3.53□□□□□ -1.84
LINC00535-202ENST00000517785 SUMO4Q6EEV6 95 aa3.53□□□□□ -1.84
LINC00535-202ENST00000517785 BPIFA4PQ86YQ2 179 aa3.53□□□□□ -1.84
LINC00535-202ENST00000517785 ZFAND2AQ8N6M9 145 aa3.53□□□□□ -1.84
LINC00535-202ENST00000517785 TERB2Q8NHR7 220 aa3.53□□□□□ -1.84
LINC00535-202ENST00000517785 Q8TAT8 98 aa3.53□□□□□ -1.84
LINC00535-202ENST00000517785 GTSF1Q8WW33 167 aa3.53□□□□□ -1.84
LINC00535-202ENST00000517785 RASL10AQ92737 203 aa3.53□□□□□ -1.84
LINC00535-202ENST00000517785 SAT2Q96F10 170 aaPredicted RBP3.53□□□□□ -1.84
LINC00535-202ENST00000517785 FAM19A4Q96LR4 140 aa3.53□□□□□ -1.84
LINC00535-202ENST00000517785 NAGKQ9UJ70 344 aa3.53□□□□□ -1.84
LINC00535-202ENST00000517785 PXMP4Q9Y6I8 212 aa3.53□□□□□ -1.84
LINC00535-202ENST00000517785 GAGE12JA6NER3 117 aa3.52□□□□□ -1.85
LINC00535-202ENST00000517785 WRBO00258 174 aa3.52□□□□□ -1.85
LINC00535-202ENST00000517785 IGLC2P0DOY2 106 aa3.52□□□□□ -1.85
LINC00535-202ENST00000517785 CRISP2P16562 243 aa3.52□□□□□ -1.85
LINC00535-202ENST00000517785 AKR1C4P17516 323 aa3.52□□□□□ -1.85
LINC00535-202ENST00000517785 ATP5IP56385 69 aaPredicted RBP3.52□□□□□ -1.85
LINC00535-202ENST00000517785 PLP1P60201 277 aa3.52□□□□□ -1.85
LINC00535-202ENST00000517785 GAGE1Q13065 139 aa3.52□□□□□ -1.85
LINC00535-202ENST00000517785 GAGE4Q13068 117 aa3.52□□□□□ -1.85
LINC00535-202ENST00000517785 GAGE5Q13069 117 aa3.52□□□□□ -1.85
LINC00535-202ENST00000517785 RHOHQ15669 191 aa3.52□□□□□ -1.85
LINC00535-202ENST00000517785 PRR4Q16378 134 aa3.52□□□□□ -1.85
LINC00535-202ENST00000517785 SPANXN5Q5MJ07 72 aa3.52□□□□□ -1.85
LINC00535-202ENST00000517785 REG3GQ6UW15 175 aa3.52□□□□□ -1.85
LINC00535-202ENST00000517785 SDIM1Q6ZPB5 146 aa3.52□□□□□ -1.85
LINC00535-202ENST00000517785 C9orf163Q8N9P6 203 aa3.52□□□□□ -1.85
LINC00535-202ENST00000517785 C7orf33Q8WU49 177 aa3.52□□□□□ -1.85
LINC00535-202ENST00000517785 RAB2BQ8WUD1 216 aa3.52□□□□□ -1.85
LINC00535-202ENST00000517785 SOSTQ9BQB4 213 aa3.52□□□□□ -1.85
LINC00535-202ENST00000517785 PRADC1Q9BSG0 188 aa3.52□□□□□ -1.85
LINC00535-202ENST00000517785 SRRQ9GZT4 340 aa3.52□□□□□ -1.85
LINC00535-202ENST00000517785 VCXQ9H320 206 aa3.52□□□□□ -1.85
LINC00535-202ENST00000517785 FBLL1A6NHQ2 334 aaKnown RBP3.51□□□□□ -1.85
LINC00535-202ENST00000517785 AGPAT2O15120 278 aa3.51□□□□□ -1.85
LINC00535-202ENST00000517785 COX7A2P2O60397 106 aa3.51□□□□□ -1.85
LINC00535-202ENST00000517785 RAB3DO95716 219 aa3.51□□□□□ -1.85
LINC00535-202ENST00000517785 UBE2MP61081 183 aaKnown RBP3.51□□□□□ -1.85
LINC00535-202ENST00000517785 POLR2GP62487 172 aaKnown RBP eCLIP3.51□□□□□ -1.85
LINC00535-202ENST00000517785 BAK1Q16611 211 aa3.51□□□□□ -1.85
LINC00535-202ENST00000517785 DPPA3Q6W0C5 159 aa3.51□□□□□ -1.85
LINC00535-202ENST00000517785 EXOC3-AS1Q8N2X6 119 aa3.51□□□□□ -1.85
LINC00535-202ENST00000517785 OR52I2Q8NH67 350 aa3.51□□□□□ -1.85
LINC00535-202ENST00000517785 LYPD6BQ8NI32 183 aa3.51□□□□□ -1.85
LINC00535-202ENST00000517785 C2orf50Q96LR7 162 aa3.51□□□□□ -1.85
LINC00535-202ENST00000517785 CNBD2Q96M20 576 aa3.51□□□□□ -1.85
LINC00535-202ENST00000517785 SPXQ9BT56 116 aa3.51□□□□□ -1.85
LINC00535-202ENST00000517785 C1orf43Q9BWL3 253 aa3.51□□□□□ -1.85
LINC00535-202ENST00000517785 OR51M1Q9H341 326 aa3.51□□□□□ -1.85
LINC00535-202ENST00000517785 COMMD3Q9UBI1 195 aa3.51□□□□□ -1.85
LINC00535-202ENST00000517785 CACFD1Q9UGQ2 172 aa3.51□□□□□ -1.85
LINC00535-202ENST00000517785 URGCP-MRPS24S4R325 110 aa3.51□□□□□ -1.85
LINC00535-202ENST00000517785 A0A0B4J2A0 478 aa3.5□□□□□ -1.85
LINC00535-202ENST00000517785 MUC21A0A0G2JKD1 596 aa3.5□□□□□ -1.85
LINC00535-202ENST00000517785 SMIM31A0A1B0GVY4 71 aa3.5□□□□□ -1.85
LINC00535-202ENST00000517785 H7C1H1 209 aa3.5□□□□□ -1.85
LINC00535-202ENST00000517785 M0R2P5 195 aa3.5□□□□□ -1.85
LINC00535-202ENST00000517785 GNRH2O43555 120 aa3.5□□□□□ -1.85
LINC00535-202ENST00000517785 ZNF253O75346 499 aa3.5□□□□□ -1.85
LINC00535-202ENST00000517785 LSM3P62310 102 aaKnown RBP3.5□□□□□ -1.85
LINC00535-202ENST00000517785 SELENOTP62341 195 aa3.5□□□□□ -1.85
LINC00535-202ENST00000517785 CIRBPQ14011 172 aaKnown RBP3.5□□□□□ -1.85
LINC00535-202ENST00000517785 TMEM78Q5T7P6 136 aa3.5□□□□□ -1.85
LINC00535-202ENST00000517785 S100A7AQ86SG5 101 aa3.5□□□□□ -1.85
LINC00535-202ENST00000517785 NIT1Q86X76 327 aa3.5□□□□□ -1.85
LINC00535-202ENST00000517785 Q9UF83 564 aa3.5□□□□□ -1.85
LINC00535-202ENST00000517785 SHPKQ9UHJ6 478 aa3.5□□□□□ -1.85
LINC00535-202ENST00000517785 BLOC1S6Q9UL45 172 aa3.5□□□□□ -1.85
LINC00535-202ENST00000517785 ANKRD65E5RJM6 399 aa3.49□□□□□ -1.85
LINC00535-202ENST00000517785 GOSR2O14653 212 aa3.49□□□□□ -1.85
LINC00535-202ENST00000517785 SYNGR2O43760 224 aa3.49□□□□□ -1.85
LINC00535-202ENST00000517785 HPGDSO60760 199 aa3.49□□□□□ -1.85
LINC00535-202ENST00000517785 NDUFB4O95168 129 aa3.49□□□□□ -1.85
LINC00535-202ENST00000517785 RPP30P78346 268 aaKnown RBP3.49□□□□□ -1.85
LINC00535-202ENST00000517785 RAB31Q13636 194 aa3.49□□□□□ -1.85
LINC00535-202ENST00000517785 SURF2Q15527 256 aaPredicted RBP3.49□□□□□ -1.85
LINC00535-202ENST00000517785 CFAP126Q5VTH2 177 aa3.49□□□□□ -1.85
LINC00535-202ENST00000517785 C10orf113Q5VZT2 155 aa3.49□□□□□ -1.85
LINC00535-202ENST00000517785 SPINK6Q6UWN8 80 aa3.49□□□□□ -1.85
LINC00535-202ENST00000517785 FAM159AQ6UWV7 190 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms