RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 PAX4O43316 350 aa5.13□□□□□ -1.59
TNFRSF11B-202ENST00000517352 SLC25A5P05141 298 aaKnown RBP5.13□□□□□ -1.59
TNFRSF11B-202ENST00000517352 PET100P0DJ07 73 aa5.13□□□□□ -1.59
TNFRSF11B-202ENST00000517352 HIST1H1EP10412 219 aaKnown RBP5.13□□□□□ -1.59
TNFRSF11B-202ENST00000517352 GCSHP23434 173 aa5.13□□□□□ -1.59
TNFRSF11B-202ENST00000517352 RNASE4P34096 147 aaKnown RBP5.13□□□□□ -1.59
TNFRSF11B-202ENST00000517352 BAXQ07812 192 aa5.13□□□□□ -1.59
TNFRSF11B-202ENST00000517352 ESRGQ1W209 222 aa5.13□□□□□ -1.59
TNFRSF11B-202ENST00000517352 TMEM78Q5T7P6 136 aa5.13□□□□□ -1.59
TNFRSF11B-202ENST00000517352 NFE4Q86UQ8 179 aa5.13□□□□□ -1.59
TNFRSF11B-202ENST00000517352 BOD1L2Q8IYS8 172 aa5.13□□□□□ -1.59
TNFRSF11B-202ENST00000517352 FRZBQ92765 325 aa5.13□□□□□ -1.59
TNFRSF11B-202ENST00000517352 PACRGQ96M98 296 aaPredicted RBP5.13□□□□□ -1.59
TNFRSF11B-202ENST00000517352 C17orf77Q96MU5 243 aa5.13□□□□□ -1.59
TNFRSF11B-202ENST00000517352 GGACTQ9BVM4 153 aa5.13□□□□□ -1.59
TNFRSF11B-202ENST00000517352 SLIRPQ9GZT3 109 aaKnown RBP5.13□□□□□ -1.59
TNFRSF11B-202ENST00000517352 MRPL18Q9H0U6 180 aaKnown RBP5.13□□□□□ -1.59
TNFRSF11B-202ENST00000517352 TMPRSS5Q9H3S3 457 aa5.13□□□□□ -1.59
TNFRSF11B-202ENST00000517352 FUT9Q9Y231 359 aa5.13□□□□□ -1.59
TNFRSF11B-202ENST00000517352 MRPS16Q9Y3D3 137 aaKnown RBP5.13□□□□□ -1.59
TNFRSF11B-202ENST00000517352 LSM5Q9Y4Y9 91 aaKnown RBP5.13□□□□□ -1.59
TNFRSF11B-202ENST00000517352 ICOSQ9Y6W8 199 aa5.13□□□□□ -1.59
TNFRSF11B-202ENST00000517352 PRSS46E5RG02 174 aa5.12□□□□□ -1.59
TNFRSF11B-202ENST00000517352 FNDC10F2Z333 226 aa5.12□□□□□ -1.59
TNFRSF11B-202ENST00000517352 H3BMQ9 156 aa5.12□□□□□ -1.59
TNFRSF11B-202ENST00000517352 H3BNG1 76 aa5.12□□□□□ -1.59
TNFRSF11B-202ENST00000517352 SNAI2O43623 268 aa5.12□□□□□ -1.59
TNFRSF11B-202ENST00000517352 PSCAO43653 123 aa5.12□□□□□ -1.59
TNFRSF11B-202ENST00000517352 IGHV3-53P01767 116 aa5.12□□□□□ -1.59
TNFRSF11B-202ENST00000517352 HOXA5P20719 270 aa5.12□□□□□ -1.59
TNFRSF11B-202ENST00000517352 EVI2AP22794 236 aa5.12□□□□□ -1.59
TNFRSF11B-202ENST00000517352 TAS2R30P59541 319 aa5.12□□□□□ -1.59
TNFRSF11B-202ENST00000517352 PLP1P60201 277 aa5.12□□□□□ -1.59
TNFRSF11B-202ENST00000517352 HERV-K104P63124 156 aa5.12□□□□□ -1.59
TNFRSF11B-202ENST00000517352 HBG1P69891 147 aa5.12□□□□□ -1.59
TNFRSF11B-202ENST00000517352 HBG2P69892 147 aa5.12□□□□□ -1.59
TNFRSF11B-202ENST00000517352 PRR27Q6MZM9 219 aa5.12□□□□□ -1.59
TNFRSF11B-202ENST00000517352 Q6ZTI0 123 aa5.12□□□□□ -1.59
TNFRSF11B-202ENST00000517352 ZFP82Q8N141 532 aa5.12□□□□□ -1.59
TNFRSF11B-202ENST00000517352 EIF4E3Q8N5X7 224 aaKnown RBP5.12□□□□□ -1.59
TNFRSF11B-202ENST00000517352 BLNKQ8WV28 456 aa5.12□□□□□ -1.59
TNFRSF11B-202ENST00000517352 GSN-AS1Q9NRJ2 163 aa5.12□□□□□ -1.59
TNFRSF11B-202ENST00000517352 UQCC1Q9NVA1 299 aa5.12□□□□□ -1.59
TNFRSF11B-202ENST00000517352 A0A096LPF7 62 aa5.11□□□□□ -1.59
TNFRSF11B-202ENST00000517352 TRGV4A0A0C4DH28 118 aa5.11□□□□□ -1.59
TNFRSF11B-202ENST00000517352 PLAC8L1A1L4L8 177 aa5.11□□□□□ -1.59
TNFRSF11B-202ENST00000517352 C7orf71A4D174 169 aa5.11□□□□□ -1.59
TNFRSF11B-202ENST00000517352 PRAC2D3DTV9 90 aa5.11□□□□□ -1.59
TNFRSF11B-202ENST00000517352 CCSO14618 274 aa5.11□□□□□ -1.59
TNFRSF11B-202ENST00000517352 MPDU1O75352 247 aa5.11□□□□□ -1.59
TNFRSF11B-202ENST00000517352 CST7O76096 145 aa5.11□□□□□ -1.59
TNFRSF11B-202ENST00000517352 NDUFB6O95139 128 aa5.11□□□□□ -1.59
TNFRSF11B-202ENST00000517352 NXPH4O95158 308 aa5.11□□□□□ -1.59
TNFRSF11B-202ENST00000517352 INAFM2P0DMQ5 153 aa5.11□□□□□ -1.59
TNFRSF11B-202ENST00000517352 CT45A10P0DMU9 189 aa5.11□□□□□ -1.59
TNFRSF11B-202ENST00000517352 CSN1S1P47710 185 aa5.11□□□□□ -1.59
TNFRSF11B-202ENST00000517352 LINC00315P59091 139 aa5.11□□□□□ -1.59
TNFRSF11B-202ENST00000517352 S100A10P60903 97 aa5.11□□□□□ -1.59
TNFRSF11B-202ENST00000517352 DAZ2Q13117 558 aaKnown RBP5.11□□□□□ -1.59
TNFRSF11B-202ENST00000517352 OPCMLQ14982 345 aa5.11□□□□□ -1.59
TNFRSF11B-202ENST00000517352 MRPL23Q16540 153 aaKnown RBP5.11□□□□□ -1.59
TNFRSF11B-202ENST00000517352 CNPY1Q3B7I2 92 aa5.11□□□□□ -1.59
TNFRSF11B-202ENST00000517352 TMEM14EPQ6UXP3 125 aa5.11□□□□□ -1.59
TNFRSF11B-202ENST00000517352 PATE2Q6UY27 113 aa5.11□□□□□ -1.59
TNFRSF11B-202ENST00000517352 LINC00477Q96M19 166 aa5.11□□□□□ -1.59
TNFRSF11B-202ENST00000517352 UPK3BQ9BT76 320 aa5.11□□□□□ -1.59
TNFRSF11B-202ENST00000517352 KRTAP4-5Q9BYR2 181 aa5.11□□□□□ -1.59
TNFRSF11B-202ENST00000517352 HHLA3Q9XRX5 114 aa5.11□□□□□ -1.59
TNFRSF11B-202ENST00000517352 HSPG2P98160 4391 aa5.1□□□□□ -1.59
TNFRSF11B-202ENST00000517352 DNAH5Q8TE73 4624 aa5.1□□□□□ -1.59
TNFRSF11B-202ENST00000517352 TRAV5A0A0B4J249 113 aa5.1□□□□□ -1.59
TNFRSF11B-202ENST00000517352 UBE2L5PA0A1B0GUS4 154 aa5.1□□□□□ -1.59
TNFRSF11B-202ENST00000517352 C7orf66A4D0T2 115 aa5.1□□□□□ -1.59
TNFRSF11B-202ENST00000517352 E5RGE8 158 aa5.1□□□□□ -1.59
TNFRSF11B-202ENST00000517352 NPIPB6E9PJ23 425 aa5.1□□□□□ -1.59
TNFRSF11B-202ENST00000517352 K7EPK0 472 aa5.1□□□□□ -1.59
TNFRSF11B-202ENST00000517352 CCNKO75909 580 aa5.1□□□□□ -1.59
TNFRSF11B-202ENST00000517352 SRIP30626 198 aa5.1□□□□□ -1.59
TNFRSF11B-202ENST00000517352 S100A11P31949 105 aa5.1□□□□□ -1.59
TNFRSF11B-202ENST00000517352 SNRPEP62304 92 aaKnown RBP5.1□□□□□ -1.59
TNFRSF11B-202ENST00000517352 ZNF415Q09FC8 603 aa5.1□□□□□ -1.59
TNFRSF11B-202ENST00000517352 KIR3DS1Q14943 382 aa5.1□□□□□ -1.59
TNFRSF11B-202ENST00000517352 COX19Q49B96 90 aa5.1□□□□□ -1.59
TNFRSF11B-202ENST00000517352 OR2D3Q8NGH3 330 aa5.1□□□□□ -1.59
TNFRSF11B-202ENST00000517352 ZNF431Q8TF32 576 aaPredicted RBP5.1□□□□□ -1.59
TNFRSF11B-202ENST00000517352 ODF3Q96PU9 254 aa5.1□□□□□ -1.59
TNFRSF11B-202ENST00000517352 SOSTQ9BQB4 213 aa5.1□□□□□ -1.59
TNFRSF11B-202ENST00000517352 SLC39A9Q9NUM3 307 aa5.1□□□□□ -1.59
TNFRSF11B-202ENST00000517352 PRO0255Q9UI72 69 aa5.1□□□□□ -1.59
TNFRSF11B-202ENST00000517352 RCL1Q9Y2P8 373 aaKnown RBP5.1□□□□□ -1.59
TNFRSF11B-202ENST00000517352 LY96Q9Y6Y9 160 aa5.1□□□□□ -1.59
TNFRSF11B-202ENST00000517352 LRP1BQ9NZR2 4599 aa5.09□□□□□ -1.59
TNFRSF11B-202ENST00000517352 H3BQ15 152 aa5.09□□□□□ -1.59
TNFRSF11B-202ENST00000517352 SLC17A3O00476 420 aa5.09□□□□□ -1.59
TNFRSF11B-202ENST00000517352 IGLC2P0DOY2 106 aa5.09□□□□□ -1.59
TNFRSF11B-202ENST00000517352 PMCHP20382 165 aa5.09□□□□□ -1.59
TNFRSF11B-202ENST00000517352 FGF7P21781 194 aa5.09□□□□□ -1.59
TNFRSF11B-202ENST00000517352 KRTAP10-2P60368 255 aa5.09□□□□□ -1.59
TNFRSF11B-202ENST00000517352 ERCC8Q13216 396 aa5.09□□□□□ -1.59
TNFRSF11B-202ENST00000517352 MIC13Q5XKP0 118 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms