RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 EIF4E3Q8N5X7 224 aaKnown RBP5.55□□□□□ -1.52
SCARNA20.3-201ENST00000516913 TMEM252Q8N6L7 170 aa5.55□□□□□ -1.52
SCARNA20.3-201ENST00000516913 OR2T35Q8NGX2 323 aa5.55□□□□□ -1.52
SCARNA20.3-201ENST00000516913 BLNKQ8WV28 456 aa5.55□□□□□ -1.52
SCARNA20.3-201ENST00000516913 FXYD5Q96DB9 178 aa5.55□□□□□ -1.52
SCARNA20.3-201ENST00000516913 LSM5Q9Y4Y9 91 aaKnown RBP5.55□□□□□ -1.52
SCARNA20.3-201ENST00000516913 LRP2P98164 4655 aa5.55□□□□□ -1.52
SCARNA20.3-201ENST00000516913 RNF213Q63HN8 5207 aa5.54□□□□□ -1.52
SCARNA20.3-201ENST00000516913 TRGV2A0A075B6R0 118 aa5.54□□□□□ -1.52
SCARNA20.3-201ENST00000516913 FAM25EA8MYX2 175 aa5.54□□□□□ -1.52
SCARNA20.3-201ENST00000516913 K7EQD1 137 aa5.54□□□□□ -1.52
SCARNA20.3-201ENST00000516913 PAX4O43316 350 aa5.54□□□□□ -1.52
SCARNA20.3-201ENST00000516913 NHLH2Q02577 135 aa5.54□□□□□ -1.52
SCARNA20.3-201ENST00000516913 RAB32Q13637 225 aa5.54□□□□□ -1.52
SCARNA20.3-201ENST00000516913 ICAM4Q14773 271 aa5.54□□□□□ -1.52
SCARNA20.3-201ENST00000516913 TVP23CQ96ET8 276 aa5.54□□□□□ -1.52
SCARNA20.3-201ENST00000516913 PHYHIPLQ96FC7 376 aa5.54□□□□□ -1.52
SCARNA20.3-201ENST00000516913 PGPEP1Q9NXJ5 209 aa5.54□□□□□ -1.52
SCARNA20.3-201ENST00000516913 TMEM14CQ9P0S9 112 aa5.54□□□□□ -1.52
SCARNA20.3-201ENST00000516913 ZNF492Q9P255 531 aa5.54□□□□□ -1.52
SCARNA20.3-201ENST00000516913 Q9UF83 564 aa5.54□□□□□ -1.52
SCARNA20.3-201ENST00000516913 IGHV1OR15-1A0A075B7D0 117 aa5.53□□□□□ -1.52
SCARNA20.3-201ENST00000516913 UBE2L5PA0A1B0GUS4 154 aa5.53□□□□□ -1.52
SCARNA20.3-201ENST00000516913 E5RGE8 158 aa5.53□□□□□ -1.52
SCARNA20.3-201ENST00000516913 ZNF253O75346 499 aa5.53□□□□□ -1.52
SCARNA20.3-201ENST00000516913 MPDU1O75352 247 aa5.53□□□□□ -1.52
SCARNA20.3-201ENST00000516913 HIST1H1EP10412 219 aaKnown RBP5.53□□□□□ -1.52
SCARNA20.3-201ENST00000516913 KRTAP10-4P60372 401 aaPredicted RBP5.53□□□□□ -1.52
SCARNA20.3-201ENST00000516913 MUC21Q5SSG8 566 aa5.53□□□□□ -1.52
SCARNA20.3-201ENST00000516913 FAM122CQ6P4D5 195 aa5.53□□□□□ -1.52
SCARNA20.3-201ENST00000516913 DPPA3Q6W0C5 159 aa5.53□□□□□ -1.52
SCARNA20.3-201ENST00000516913 PPP1R1CQ8WVI7 109 aa5.53□□□□□ -1.52
SCARNA20.3-201ENST00000516913 MRPL53Q96EL3 112 aaKnown RBP5.53□□□□□ -1.52
SCARNA20.3-201ENST00000516913 C2orf50Q96LR7 162 aa5.53□□□□□ -1.52
SCARNA20.3-201ENST00000516913 MRPL32Q9BYC8 188 aaKnown RBP5.53□□□□□ -1.52
SCARNA20.3-201ENST00000516913 LYRM2Q9NU23 88 aaPredicted RBP5.53□□□□□ -1.52
SCARNA20.3-201ENST00000516913 UQCC1Q9NVA1 299 aa5.53□□□□□ -1.52
SCARNA20.3-201ENST00000516913 C11orf21Q9P2W6 132 aa5.53□□□□□ -1.52
SCARNA20.3-201ENST00000516913 HHLA3Q9XRX5 114 aa5.53□□□□□ -1.52
SCARNA20.3-201ENST00000516913 RNF222A6NCQ9 220 aa5.52□□□□□ -1.53
SCARNA20.3-201ENST00000516913 C5orf51A6NDU8 294 aa5.52□□□□□ -1.53
SCARNA20.3-201ENST00000516913 GNRH2O43555 120 aa5.52□□□□□ -1.53
SCARNA20.3-201ENST00000516913 MPC2O95563 127 aa5.52□□□□□ -1.53
SCARNA20.3-201ENST00000516913 CAV2P51636 162 aa5.52□□□□□ -1.53
SCARNA20.3-201ENST00000516913 GUK1Q16774 197 aa5.52□□□□□ -1.53
SCARNA20.3-201ENST00000516913 LRRC37A5PQ49AS3 106 aa5.52□□□□□ -1.53
SCARNA20.3-201ENST00000516913 THAP6Q8TBB0 222 aa5.52□□□□□ -1.53
SCARNA20.3-201ENST00000516913 HYLS1Q96M11 299 aa5.52□□□□□ -1.53
SCARNA20.3-201ENST00000516913 LINC00477Q96M19 166 aa5.52□□□□□ -1.53
SCARNA20.3-201ENST00000516913 NPCDR1Q9BY65 106 aa5.52□□□□□ -1.53
SCARNA20.3-201ENST00000516913 NMES1Q9C002 83 aa5.52□□□□□ -1.53
SCARNA20.3-201ENST00000516913 OR5AC2Q9NZP5 309 aa5.52□□□□□ -1.53
SCARNA20.3-201ENST00000516913 PRO0255Q9UI72 69 aa5.52□□□□□ -1.53
SCARNA20.3-201ENST00000516913 ICOSQ9Y6W8 199 aa5.52□□□□□ -1.53
SCARNA20.3-201ENST00000516913 PIGBOS1A0A0B4J2F0 54 aa5.51□□□□□ -1.53
SCARNA20.3-201ENST00000516913 IGHV3-16A0A0C4DH30 117 aa5.51□□□□□ -1.53
SCARNA20.3-201ENST00000516913 GPX1P07203 203 aa5.51□□□□□ -1.53
SCARNA20.3-201ENST00000516913 OR10J4P0C629 311 aa5.51□□□□□ -1.53
SCARNA20.3-201ENST00000516913 FGF7P21781 194 aa5.51□□□□□ -1.53
SCARNA20.3-201ENST00000516913 SULT1A1P50225 295 aa5.51□□□□□ -1.53
SCARNA20.3-201ENST00000516913 IBA57Q5T440 356 aaKnown RBP5.51□□□□□ -1.53
SCARNA20.3-201ENST00000516913 ZNF680Q8NEM1 530 aa5.51□□□□□ -1.53
SCARNA20.3-201ENST00000516913 RASL10AQ92737 203 aa5.51□□□□□ -1.53
SCARNA20.3-201ENST00000516913 DNAJC30Q96LL9 226 aa5.51□□□□□ -1.53
SCARNA20.3-201ENST00000516913 MBD2Q9UBB5 411 aa5.51□□□□□ -1.53
SCARNA20.3-201ENST00000516913 TNFSF18Q9UNG2 199 aa5.51□□□□□ -1.53
SCARNA20.3-201ENST00000516913 HSPB11Q9Y547 144 aa5.51□□□□□ -1.53
SCARNA20.3-201ENST00000516913 FXYD6-FXYD2A0A087WZ82 144 aa5.5□□□□□ -1.53
SCARNA20.3-201ENST00000516913 HMSDA8MTL9 139 aa5.5□□□□□ -1.53
SCARNA20.3-201ENST00000516913 ARPC5O15511 151 aa5.5□□□□□ -1.53
SCARNA20.3-201ENST00000516913 NMBP08949 121 aa5.5□□□□□ -1.53
SCARNA20.3-201ENST00000516913 NBEAP1P0C6P0 100 aa5.5□□□□□ -1.53
SCARNA20.3-201ENST00000516913 GYPEP15421 78 aa5.5□□□□□ -1.53
SCARNA20.3-201ENST00000516913 GCSHP23434 173 aa5.5□□□□□ -1.53
SCARNA20.3-201ENST00000516913 S100A7P31151 101 aa5.5□□□□□ -1.53
SCARNA20.3-201ENST00000516913 ZNF138P52744 262 aa5.5□□□□□ -1.53
SCARNA20.3-201ENST00000516913 BAXQ07812 192 aa5.5□□□□□ -1.53
SCARNA20.3-201ENST00000516913 PDE6HQ13956 83 aa5.5□□□□□ -1.53
SCARNA20.3-201ENST00000516913 ZNF266Q14584 549 aa5.5□□□□□ -1.53
SCARNA20.3-201ENST00000516913 Q6ZRG5 221 aa5.5□□□□□ -1.53
SCARNA20.3-201ENST00000516913 Q6ZSN1 163 aa5.5□□□□□ -1.53
SCARNA20.3-201ENST00000516913 NEGR1Q7Z3B1 354 aa5.5□□□□□ -1.53
SCARNA20.3-201ENST00000516913 IQCF2Q8IXL9 164 aa5.5□□□□□ -1.53
SCARNA20.3-201ENST00000516913 OR1L4Q8NGR5 311 aa5.5□□□□□ -1.53
SCARNA20.3-201ENST00000516913 WFDC1Q9HC57 220 aa5.5□□□□□ -1.53
SCARNA20.3-201ENST00000516913 MSRB1Q9NZV6 116 aa5.5□□□□□ -1.53
SCARNA20.3-201ENST00000516913 L7N2F9 121 aa5.49□□□□□ -1.53
SCARNA20.3-201ENST00000516913 ZNF80P51504 273 aaPredicted RBP5.49□□□□□ -1.53
SCARNA20.3-201ENST00000516913 ERVFC1-1P60608 527 aa5.49□□□□□ -1.53
SCARNA20.3-201ENST00000516913 S100A10P60903 97 aa5.49□□□□□ -1.53
SCARNA20.3-201ENST00000516913 RANP62826 216 aaKnown RBP5.49□□□□□ -1.53
SCARNA20.3-201ENST00000516913 VAMP2P63027 116 aa5.49□□□□□ -1.53
SCARNA20.3-201ENST00000516913 MRPL23Q16540 153 aaKnown RBP5.49□□□□□ -1.53
SCARNA20.3-201ENST00000516913 TMEM183BQ1AE95 376 aa5.49□□□□□ -1.53
SCARNA20.3-201ENST00000516913 LINC01620Q4KN68 170 aa5.49□□□□□ -1.53
SCARNA20.3-201ENST00000516913 Q6AWC8 147 aa5.49□□□□□ -1.53
SCARNA20.3-201ENST00000516913 CDPF1Q6NVV7 123 aa5.49□□□□□ -1.53
SCARNA20.3-201ENST00000516913 TMUB2Q71RG4 321 aa5.49□□□□□ -1.53
SCARNA20.3-201ENST00000516913 TMEM183AQ8IXX5 376 aa5.49□□□□□ -1.53
SCARNA20.3-201ENST00000516913 OR10G4Q8NGN3 311 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms