RNA–Protein interactions for RNA: ENST00000516699.1

RNU4ATAC3P-201, Transcript of RNA, U4atac small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU4ATAC3P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC3P-201ENST00000516699 NHP2Q9NX24 153 aaKnown RBP2.61□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 HHLA3Q9XRX5 114 aa2.61□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 CHTOPQ9Y3Y2 248 aaKnown RBP2.61□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 WDR87Q6ZQQ6 2873 aa2.61□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 ZNF318Q5VUA4 2279 aa2.61□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 IGLV2-18A0A075B6J9 118 aa2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 TRAV41A0A0B4J266 112 aa2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 FAM90A27PA6NNH2 459 aa2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 F8W735 103 aaPredicted RBP2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 H3BMG7 143 aa2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 M0QXV9 152 aa2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 NPFFO15130 113 aa2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 ATP6V0E1O15342 81 aa2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 HOXA3O43365 443 aaPredicted RBP2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 NXPH4O95158 308 aa2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 IGF1P05019 195 aa2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 GATA3P23771 443 aa2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 CD24P25063 80 aa2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 SAA4P35542 130 aa2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 CRYBA4P53673 196 aa2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 RPL24P83731 157 aaKnown RBP2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 NDPQ00604 133 aa2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 SRSF9Q13242 221 aaKnown RBP eCLIP2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 FOXE3Q13461 319 aa2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 RHOHQ15669 191 aa2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 RRN3P1Q2M238 152 aa2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 CD300EQ496F6 205 aaPredicted RBP2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 TCTEX1D4Q5JR98 221 aa2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 CLEC2AQ6UVW9 174 aa2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 FAM159AQ6UWV7 190 aa2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 LHFPL4Q7Z7J7 247 aa2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 PCP2Q8IVA1 136 aa2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 APRG1Q8IVJ8 170 aa2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 NRACQ8N912 160 aa2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 RAB37Q96AX2 223 aa2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 SIGMAR1Q99720 223 aa2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 SPOCK3Q9BQ16 436 aa2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 DAZ1Q9NQZ3 744 aaKnown RBP2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 SPANXB1Q9NS25 103 aaPredicted RBP2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 TMEM160Q9NX00 188 aa2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 MRPL16Q9NX20 251 aaKnown RBP2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 MRPL35Q9NZE8 188 aaKnown RBP2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 DKK2Q9UBU2 259 aa2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 TP73-AS1Q9UF72 201 aa2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 MSRB2Q9Y3D2 182 aa2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 U3KQE9 123 aa2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 TRIOO75962 3097 aa2.6□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 POLEQ07864 2286 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 IGHV4OR15-8A0A075B7B6 117 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 A0A087WW49 117 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 TRAV40A0A0B4J280 105 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 IGKV3D-20A0A0C4DH25 116 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 IGHV7-4-1A0A0J9YVY3 117 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 TMEM89A2RUT3 159 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 C11orf86A6NJI1 115 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 ZNF815PA8K554 130 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 IGLL5B9A064 214 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 TMEM238C9JI98 176 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 SMKR1H3BMG3 65 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 H3BVH4 76 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 K7EMT4 169 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 VCYO14598 125 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 APOMO95445 188 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 IGHV1-69P01742 117 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 TRGV3P03979 118 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 LGALS3P17931 250 aaKnown RBP2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 ZNF80P51504 273 aaPredicted RBP2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 FXYD2P54710 66 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 SNRPD3P62318 126 aaKnown RBP2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 LOXL1Q08397 574 aaPredicted RBP2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 SMAGPQ0VAQ4 97 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 ERCC8Q13216 396 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 KLRD1Q13241 179 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 PMVKQ15126 192 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 C12orf74Q32Q52 190 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 FAM106AQ4KMX7 169 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 TM4SF20Q53R12 229 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 PIK3CD-AS1Q5SR53 167 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 RUSC1-AS1Q66K80 236 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 C2orf66Q6UXQ4 117 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 CLEC19AQ6UXS0 136 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 Q6ZVH6 145 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 GTSCR1Q86UQ5 136 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 POM121L12Q8N7R1 296 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 C5orf56Q8N8D9 126 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 RNF152Q8N8N0 203 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 NEXN-AS1Q8NBZ9 246 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 LINC01560Q8TB33 94 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 ITLN2Q8WWU7 325 aaPredicted RBP2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 CCDC140Q96MF4 163 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 JMJD8Q96S16 334 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 SPATA25Q9BR10 227 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 PIMREGQ9BSJ6 248 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 MCRIP2Q9BUT9 160 aaKnown RBP2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 C1QTNF4Q9BXJ3 329 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 AGPAT4-IT1Q9H0P7 198 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 SMAD5-AS1Q9Y6J3 95 aa2.59□□□□□ -1.99
RNU4ATAC3P-201ENST00000516699 VCANP13611 3396 aa2.59□□□□□ -2
RNU4ATAC3P-201ENST00000516699 OTOGLQ3ZCN5 2332 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms