RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 RAB5BP61020 215 aa5.71□□□□□ -1.5
SCARNA20.1-201ENST00000516009 FOXI2Q6ZQN5 318 aa5.71□□□□□ -1.5
SCARNA20.1-201ENST00000516009 NEU1Q99519 415 aa5.71□□□□□ -1.5
SCARNA20.1-201ENST00000516009 GFRA4Q9GZZ7 299 aa5.71□□□□□ -1.5
SCARNA20.1-201ENST00000516009 SRD5A3Q9H8P0 318 aa5.71□□□□□ -1.5
SCARNA20.1-201ENST00000516009 SORL1Q92673 2214 aa5.71□□□□□ -1.5
SCARNA20.1-201ENST00000516009 AGRNO00468 2067 aa5.7□□□□□ -1.5
SCARNA20.1-201ENST00000516009 TMSB15BA0A087X1C1 80 aa5.7□□□□□ -1.5
SCARNA20.1-201ENST00000516009 HIGD1CA8MV81 97 aa5.7□□□□□ -1.5
SCARNA20.1-201ENST00000516009 SPINK4O60575 86 aa5.7□□□□□ -1.5
SCARNA20.1-201ENST00000516009 ORM1P02763 201 aa5.7□□□□□ -1.5
SCARNA20.1-201ENST00000516009 GPX1P07203 203 aa5.7□□□□□ -1.5
SCARNA20.1-201ENST00000516009 CD33P20138 364 aa5.7□□□□□ -1.5
SCARNA20.1-201ENST00000516009 DEFB131AP59861 70 aa5.7□□□□□ -1.5
SCARNA20.1-201ENST00000516009 GDF5OSQ5U4N7 250 aa5.7□□□□□ -1.5
SCARNA20.1-201ENST00000516009 LINC00482Q8N8I6 264 aa5.7□□□□□ -1.5
SCARNA20.1-201ENST00000516009 NUP35Q8NFH5 326 aa5.7□□□□□ -1.5
SCARNA20.1-201ENST00000516009 OR2K2Q8NGT1 345 aa5.7□□□□□ -1.5
SCARNA20.1-201ENST00000516009 GTSF1Q8WW33 167 aa5.7□□□□□ -1.5
SCARNA20.1-201ENST00000516009 FAM19A4Q96LR4 140 aa5.7□□□□□ -1.5
SCARNA20.1-201ENST00000516009 ODF3Q96PU9 254 aa5.7□□□□□ -1.5
SCARNA20.1-201ENST00000516009 CITED1Q99966 193 aa5.7□□□□□ -1.5
SCARNA20.1-201ENST00000516009 SAV1Q9H4B6 383 aaPredicted RBP5.7□□□□□ -1.5
SCARNA20.1-201ENST00000516009 ATRQ13535 2644 aa5.69□□□□□ -1.5
SCARNA20.1-201ENST00000516009 TRAV21A0A0B4J279 112 aa5.69□□□□□ -1.5
SCARNA20.1-201ENST00000516009 J3KRW8 73 aa5.69□□□□□ -1.5
SCARNA20.1-201ENST00000516009 IGLV1-51P01701 117 aa5.69□□□□□ -1.5
SCARNA20.1-201ENST00000516009 TRGC2P03986 189 aa5.69□□□□□ -1.5
SCARNA20.1-201ENST00000516009 GZMBP10144 247 aa5.69□□□□□ -1.5
SCARNA20.1-201ENST00000516009 CRISP2P16562 243 aa5.69□□□□□ -1.5
SCARNA20.1-201ENST00000516009 TSPOP30536 169 aa5.69□□□□□ -1.5
SCARNA20.1-201ENST00000516009 LEPP41159 167 aa5.69□□□□□ -1.5
SCARNA20.1-201ENST00000516009 CMC4P56277 68 aaPredicted RBP5.69□□□□□ -1.5
SCARNA20.1-201ENST00000516009 KRTAP24-1Q3LI83 254 aa5.69□□□□□ -1.5
SCARNA20.1-201ENST00000516009 COX19Q49B96 90 aa5.69□□□□□ -1.5
SCARNA20.1-201ENST00000516009 PRR9Q5T870 116 aa5.69□□□□□ -1.5
SCARNA20.1-201ENST00000516009 Q6AWC8 147 aa5.69□□□□□ -1.5
SCARNA20.1-201ENST00000516009 MRPL54Q6P161 138 aaKnown RBP5.69□□□□□ -1.5
SCARNA20.1-201ENST00000516009 ATP5L2Q7Z4Y8 100 aa5.69□□□□□ -1.5
SCARNA20.1-201ENST00000516009 APRG1Q8IVJ8 170 aa5.69□□□□□ -1.5
SCARNA20.1-201ENST00000516009 ZFAND2AQ8N6M9 145 aa5.69□□□□□ -1.5
SCARNA20.1-201ENST00000516009 PGLYRP4Q96LB8 373 aa5.69□□□□□ -1.5
SCARNA20.1-201ENST00000516009 MAP6D1Q9H9H5 199 aa5.69□□□□□ -1.5
SCARNA20.1-201ENST00000516009 ZNF256Q9Y2P7 627 aaPredicted RBP5.69□□□□□ -1.5
SCARNA20.1-201ENST00000516009 TENM1Q9UKZ4 2725 aa5.68□□□□□ -1.5
SCARNA20.1-201ENST00000516009 KNCNA6PVL3 124 aa5.68□□□□□ -1.5
SCARNA20.1-201ENST00000516009 KLLNB2CW77 178 aa5.68□□□□□ -1.5
SCARNA20.1-201ENST00000516009 IGKV3-20P01619 116 aa5.68□□□□□ -1.5
SCARNA20.1-201ENST00000516009 MT-ND6P03923 174 aa5.68□□□□□ -1.5
SCARNA20.1-201ENST00000516009 HLA-DRB4P13762 266 aa5.68□□□□□ -1.5
SCARNA20.1-201ENST00000516009 RNASE4P34096 147 aaKnown RBP5.68□□□□□ -1.5
SCARNA20.1-201ENST00000516009 FOXA3P55318 350 aaPredicted RBP5.68□□□□□ -1.5
SCARNA20.1-201ENST00000516009 LINC01559Q495D7 138 aa5.68□□□□□ -1.5
SCARNA20.1-201ENST00000516009 ACTL10Q5JWF8 245 aa5.68□□□□□ -1.5
SCARNA20.1-201ENST00000516009 WDR73Q6P4I2 378 aa5.68□□□□□ -1.5
SCARNA20.1-201ENST00000516009 RASL11AQ6T310 242 aa5.68□□□□□ -1.5
SCARNA20.1-201ENST00000516009 ZFP82Q8N141 532 aa5.68□□□□□ -1.5
SCARNA20.1-201ENST00000516009 FRZBQ92765 325 aa5.68□□□□□ -1.5
SCARNA20.1-201ENST00000516009 BORCS7Q96B45 105 aa5.68□□□□□ -1.5
SCARNA20.1-201ENST00000516009 TRAPPC1Q9Y5R8 145 aa5.68□□□□□ -1.5
SCARNA20.1-201ENST00000516009 HLA-DRB4X5D2U9 266 aa5.68□□□□□ -1.5
SCARNA20.1-201ENST00000516009 MAST4O15021 2626 aa5.68□□□□□ -1.5
SCARNA20.1-201ENST00000516009 A0A1B0GUT8 65 aa5.67□□□□□ -1.5
SCARNA20.1-201ENST00000516009 C7orf71A4D174 169 aa5.67□□□□□ -1.5
SCARNA20.1-201ENST00000516009 SNURFLB1AK76 121 aa5.67□□□□□ -1.5
SCARNA20.1-201ENST00000516009 OR11H12B2RN74 326 aa5.67□□□□□ -1.5
SCARNA20.1-201ENST00000516009 FRMD6-AS1P0C7T7 363 aa5.67□□□□□ -1.5
SCARNA20.1-201ENST00000516009 RAB4BP61018 213 aa5.67□□□□□ -1.5
SCARNA20.1-201ENST00000516009 FABP9Q0Z7S8 132 aa5.67□□□□□ -1.5
SCARNA20.1-201ENST00000516009 RIGQ13278 110 aa5.67□□□□□ -1.5
SCARNA20.1-201ENST00000516009 ODF3L2Q3SX64 289 aa5.67□□□□□ -1.5
SCARNA20.1-201ENST00000516009 FER1L6-AS1Q8NA97 138 aa5.67□□□□□ -1.5
SCARNA20.1-201ENST00000516009 TPPP3Q9BW30 176 aa5.67□□□□□ -1.5
SCARNA20.1-201ENST00000516009 GNB1LQ9BYB4 327 aa5.67□□□□□ -1.5
SCARNA20.1-201ENST00000516009 C11orf21Q9P2W6 132 aa5.67□□□□□ -1.5
SCARNA20.1-201ENST00000516009 NAGKQ9UJ70 344 aa5.67□□□□□ -1.5
SCARNA20.1-201ENST00000516009 TRAV12-3A0A0B4J271 114 aa5.66□□□□□ -1.5
SCARNA20.1-201ENST00000516009 IGKV3D-20A0A0C4DH25 116 aa5.66□□□□□ -1.5
SCARNA20.1-201ENST00000516009 A0A1B0GW15 77 aa5.66□□□□□ -1.5
SCARNA20.1-201ENST00000516009 A0A1B0GXF2 115 aa5.66□□□□□ -1.5
SCARNA20.1-201ENST00000516009 GRIFINA4D1Z8 144 aa5.66□□□□□ -1.5
SCARNA20.1-201ENST00000516009 A8MTW9 85 aa5.66□□□□□ -1.5
SCARNA20.1-201ENST00000516009 H3BMM0 161 aa5.66□□□□□ -1.5
SCARNA20.1-201ENST00000516009 HLA-DQA1P01909 254 aa5.66□□□□□ -1.5
SCARNA20.1-201ENST00000516009 S100A8P05109 93 aa5.66□□□□□ -1.5
SCARNA20.1-201ENST00000516009 IGLC6P0CF74 106 aa5.66□□□□□ -1.5
SCARNA20.1-201ENST00000516009 CTRLP40313 264 aa5.66□□□□□ -1.5
SCARNA20.1-201ENST00000516009 CDKN1BP46527 198 aa5.66□□□□□ -1.5
SCARNA20.1-201ENST00000516009 CAMPP49913 170 aa5.66□□□□□ -1.5
SCARNA20.1-201ENST00000516009 INSL3P51460 131 aa5.66□□□□□ -1.5
SCARNA20.1-201ENST00000516009 HBBP68871 147 aa5.66□□□□□ -1.5
SCARNA20.1-201ENST00000516009 KIR3DS1Q14943 382 aa5.66□□□□□ -1.5
SCARNA20.1-201ENST00000516009 ZNF124Q15973 351 aa5.66□□□□□ -1.5
SCARNA20.1-201ENST00000516009 SPINK13Q1W4C9 94 aa5.66□□□□□ -1.5
SCARNA20.1-201ENST00000516009 C9orf66Q5T8R8 295 aa5.66□□□□□ -1.5
SCARNA20.1-201ENST00000516009 AMTNQ6UX39 209 aa5.66□□□□□ -1.5
SCARNA20.1-201ENST00000516009 TMEM136Q6ZRR5 245 aa5.66□□□□□ -1.5
SCARNA20.1-201ENST00000516009 PRIMA1Q86XR5 153 aa5.66□□□□□ -1.5
SCARNA20.1-201ENST00000516009 C3orf56Q8N813 242 aa5.66□□□□□ -1.5
SCARNA20.1-201ENST00000516009 ZNF747Q9BV97 191 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms