RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 DSCAMO60469 2012 aa9.94□□□□□ -0.82
SMAD1-215ENST00000515385 CEP290O15078 2479 aa9.94□□□□□ -0.82
SMAD1-215ENST00000515385 H3BVH4 76 aa9.94□□□□□ -0.82
SMAD1-215ENST00000515385 MEIG1Q5JSS6 88 aa9.94□□□□□ -0.82
SMAD1-215ENST00000515385 TOMM6Q96B49 74 aa9.94□□□□□ -0.82
SMAD1-215ENST00000515385 LINC01600Q96MT4 127 aa9.94□□□□□ -0.82
SMAD1-215ENST00000515385 SCGB3A1Q96QR1 104 aa9.94□□□□□ -0.82
SMAD1-215ENST00000515385 DNAJC13O75165 2243 aa9.93□□□□□ -0.82
SMAD1-215ENST00000515385 TRAV8-2A0A0B4J237 113 aa9.93□□□□□ -0.82
SMAD1-215ENST00000515385 K7EIM0 57 aa9.93□□□□□ -0.82
SMAD1-215ENST00000515385 M0R1B8 84 aa9.93□□□□□ -0.82
SMAD1-215ENST00000515385 APELAP0DMC3 54 aa9.93□□□□□ -0.82
SMAD1-215ENST00000515385 MRPL23Q16540 153 aaKnown RBP9.93□□□□□ -0.82
SMAD1-215ENST00000515385 C10orf126Q8N4M7 172 aa9.93□□□□□ -0.82
SMAD1-215ENST00000515385 SLC25A20O43772 301 aa9.92□□□□□ -0.82
SMAD1-215ENST00000515385 SCGB2A1O75556 95 aa9.92□□□□□ -0.82
SMAD1-215ENST00000515385 COX6B1P14854 86 aa9.92□□□□□ -0.82
SMAD1-215ENST00000515385 HLA-DMBP28068 263 aa9.92□□□□□ -0.82
SMAD1-215ENST00000515385 PAPPA-AS1Q5QFB9 102 aa9.92□□□□□ -0.82
SMAD1-215ENST00000515385 PRR14LQ5THK1 2151 aa9.92□□□□□ -0.82
SMAD1-215ENST00000515385 TDHQ8IZJ6 230 aa9.92□□□□□ -0.82
SMAD1-215ENST00000515385 LRRC75A-AS1Q8N1F1 130 aa9.92□□□□□ -0.82
SMAD1-215ENST00000515385 KIR2DL4Q99706 377 aa9.92□□□□□ -0.82
SMAD1-215ENST00000515385 RNF5Q99942 180 aa9.92□□□□□ -0.82
SMAD1-215ENST00000515385 EFNA4P52798 201 aa9.92□□□□□ -0.82
SMAD1-215ENST00000515385 OR10J6PQ8NGY7 276 aa9.92□□□□□ -0.82
SMAD1-215ENST00000515385 SMIM2Q9BVW6 85 aa9.92□□□□□ -0.82
SMAD1-215ENST00000515385 AGRNO00468 2067 aa9.91□□□□□ -0.82
SMAD1-215ENST00000515385 HEATR1Q9H583 2144 aaKnown RBP9.91□□□□□ -0.82
SMAD1-215ENST00000515385 IGHV4-4A0A075B6R2 117 aa9.91□□□□□ -0.82
SMAD1-215ENST00000515385 NDUFB3O43676 98 aa9.91□□□□□ -0.82
SMAD1-215ENST00000515385 CD59P13987 128 aa9.91□□□□□ -0.82
SMAD1-215ENST00000515385 HERVK_113P61574 105 aa9.91□□□□□ -0.82
SMAD1-215ENST00000515385 ERCC8Q13216 396 aa9.91□□□□□ -0.82
SMAD1-215ENST00000515385 FAM159AQ6UWV7 190 aa9.91□□□□□ -0.82
SMAD1-215ENST00000515385 ASCL5Q7RTU5 278 aa9.91□□□□□ -0.82
SMAD1-215ENST00000515385 RBAKDNA6NC62 111 aa9.91□□□□□ -0.82
SMAD1-215ENST00000515385 RASL10AQ92737 203 aa9.91□□□□□ -0.82
SMAD1-215ENST00000515385 SLC50A1Q9BRV3 221 aa9.91□□□□□ -0.82
SMAD1-215ENST00000515385 PRO1854Q9UHT4 67 aa9.91□□□□□ -0.82
SMAD1-215ENST00000515385 RAI1Q7Z5J4 1906 aaPredicted RBP9.9□□□□□ -0.82
SMAD1-215ENST00000515385 IGHV3-72A0A0B4J1Y9 119 aa9.9□□□□□ -0.82
SMAD1-215ENST00000515385 TRAV4A0A0B4J268 109 aa9.9□□□□□ -0.82
SMAD1-215ENST00000515385 DLX6P56179 175 aa9.9□□□□□ -0.82
SMAD1-215ENST00000515385 Q8TAT8 98 aa9.9□□□□□ -0.82
SMAD1-215ENST00000515385 VKORC1Q9BQB6 163 aa9.9□□□□□ -0.82
SMAD1-215ENST00000515385 A0A1B0GX51 115 aa9.89□□□□□ -0.83
SMAD1-215ENST00000515385 LINC01548A6NM66 108 aa9.89□□□□□ -0.83
SMAD1-215ENST00000515385 CFC1BP0CG36 223 aa9.89□□□□□ -0.83
SMAD1-215ENST00000515385 CFC1P0CG37 223 aa9.89□□□□□ -0.83
SMAD1-215ENST00000515385 CNTFRP26992 372 aa9.89□□□□□ -0.83
SMAD1-215ENST00000515385 SFTA2Q6UW10 78 aa9.89□□□□□ -0.83
SMAD1-215ENST00000515385 PLEKHB2Q96CS7 222 aa9.89□□□□□ -0.83
SMAD1-215ENST00000515385 A0A0J9YY99 117 aa9.89□□□□□ -0.83
SMAD1-215ENST00000515385 P0DMU3 169 aa9.89□□□□□ -0.83
SMAD1-215ENST00000515385 FAM231AP0DMU4 169 aa9.89□□□□□ -0.83
SMAD1-215ENST00000515385 FAM231CP0DMU5 169 aa9.89□□□□□ -0.83
SMAD1-215ENST00000515385 IGHV1-8P0DP01 117 aa9.89□□□□□ -0.83
SMAD1-215ENST00000515385 RPL13AP40429 203 aaKnown RBP9.89□□□□□ -0.83
SMAD1-215ENST00000515385 ONECUT1Q9UBC0 465 aa9.89□□□□□ -0.83
SMAD1-215ENST00000515385 NAV3Q8IVL0 2385 aa9.89□□□□□ -0.83
SMAD1-215ENST00000515385 PRB4P10163 310 aaPredicted RBP9.88□□□□□ -0.83
SMAD1-215ENST00000515385 MFAP4P55083 255 aa9.88□□□□□ -0.83
SMAD1-215ENST00000515385 ANXA2RQ3ZCQ2 193 aa9.88□□□□□ -0.83
SMAD1-215ENST00000515385 TMEM155Q4W5P6 130 aa9.88□□□□□ -0.83
SMAD1-215ENST00000515385 BAALCQ8WXS3 180 aa9.88□□□□□ -0.83
SMAD1-215ENST00000515385 TRAV8-4A0A0B4J246 113 aa9.87□□□□□ -0.83
SMAD1-215ENST00000515385 C9JAW5 83 aa9.87□□□□□ -0.83
SMAD1-215ENST00000515385 IGHV3-30P01768 117 aa9.87□□□□□ -0.83
SMAD1-215ENST00000515385 TRGV3P03979 118 aa9.87□□□□□ -0.83
SMAD1-215ENST00000515385 IGHV3-30-5P0DP03 117 aa9.87□□□□□ -0.83
SMAD1-215ENST00000515385 RPS28P62857 69 aaKnown RBP9.87□□□□□ -0.83
SMAD1-215ENST00000515385 TIMD4Q96H15 378 aa9.87□□□□□ -0.83
SMAD1-215ENST00000515385 SPANXDQ9BXN6 97 aa9.87□□□□□ -0.83
SMAD1-215ENST00000515385 TRIOBPQ9H2D6 2365 aa9.87□□□□□ -0.83
SMAD1-215ENST00000515385 IGHV1-3A0A0C4DH29 117 aa9.87□□□□□ -0.83
SMAD1-215ENST00000515385 SLC25A29Q8N8R3 303 aa9.87□□□□□ -0.83
SMAD1-215ENST00000515385 OR13C6PQ8NH95 151 aa9.87□□□□□ -0.83
SMAD1-215ENST00000515385 LINC01587Q99440 93 aa9.87□□□□□ -0.83
SMAD1-215ENST00000515385 SDK1Q7Z5N4 2213 aa9.87□□□□□ -0.83
SMAD1-215ENST00000515385 GFRALQ6UXV0 394 aa9.86□□□□□ -0.83
SMAD1-215ENST00000515385 Q8N1Y9 231 aa9.86□□□□□ -0.83
SMAD1-215ENST00000515385 CFHR4Q92496 578 aa9.86□□□□□ -0.83
SMAD1-215ENST00000515385 IGKV3D-20A0A0C4DH25 116 aa9.86□□□□□ -0.83
SMAD1-215ENST00000515385 J3KT08 172 aa9.86□□□□□ -0.83
SMAD1-215ENST00000515385 CRLF1O75462 422 aa9.86□□□□□ -0.83
SMAD1-215ENST00000515385 ATXN8Q156A1 80 aa9.86□□□□□ -0.83
SMAD1-215ENST00000515385 LOXP28300 417 aaPredicted RBP9.85□□□□□ -0.83
SMAD1-215ENST00000515385 SUMO2P61956 95 aaKnown RBP9.85□□□□□ -0.83
SMAD1-215ENST00000515385 SPANXN1Q5VSR9 72 aa9.85□□□□□ -0.83
SMAD1-215ENST00000515385 IGFBPL1Q8WX77 278 aa9.85□□□□□ -0.83
SMAD1-215ENST00000515385 UBTD1Q9HAC8 227 aa9.85□□□□□ -0.83
SMAD1-215ENST00000515385 TRAV26-2A0A0B4J265 109 aa9.84□□□□□ -0.83
SMAD1-215ENST00000515385 IGHV7-4-1A0A0J9YVY3 117 aa9.84□□□□□ -0.83
SMAD1-215ENST00000515385 F8WDY8 70 aa9.84□□□□□ -0.83
SMAD1-215ENST00000515385 PPP1R17O96001 155 aa9.84□□□□□ -0.83
SMAD1-215ENST00000515385 C2orf66Q6UXQ4 117 aa9.84□□□□□ -0.83
SMAD1-215ENST00000515385 TMEM105Q8N8V8 129 aa9.84□□□□□ -0.83
SMAD1-215ENST00000515385 C15orf53Q8NAA6 179 aa9.84□□□□□ -0.83
SMAD1-215ENST00000515385 NUP37Q8NFH4 326 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms