RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 MUC4Q99102 2169 aa0.18□□□□□ -2.38
NEDD4-211ENST00000514893 KIAA1549LQ6ZVL6 1849 aa0.17□□□□□ -2.38
NEDD4-211ENST00000514893 ZFYVE26Q68DK2 2539 aa0.17□□□□□ -2.38
NEDD4-211ENST00000514893 TRAV13-1A0A0B4J241 112 aa0.17□□□□□ -2.38
NEDD4-211ENST00000514893 A0A0J9YY99 117 aa0.17□□□□□ -2.38
NEDD4-211ENST00000514893 H7BYZ3 331 aa0.17□□□□□ -2.38
NEDD4-211ENST00000514893 TPST1O60507 370 aa0.17□□□□□ -2.38
NEDD4-211ENST00000514893 TFF1P04155 84 aa0.17□□□□□ -2.38
NEDD4-211ENST00000514893 NEFHP12036 1026 aa0.17□□□□□ -2.38
NEDD4-211ENST00000514893 CRYGSP22914 178 aa0.17□□□□□ -2.38
NEDD4-211ENST00000514893 FXYD3Q14802 87 aa0.17□□□□□ -2.38
NEDD4-211ENST00000514893 TMEM229BQ8NBD8 167 aa0.17□□□□□ -2.38
NEDD4-211ENST00000514893 NUP210Q8TEM1 1887 aaPredicted RBP0.17□□□□□ -2.38
NEDD4-211ENST00000514893 DIRC1Q969H9 104 aa0.17□□□□□ -2.38
NEDD4-211ENST00000514893 NABP2Q9BQ15 211 aa0.17□□□□□ -2.38
NEDD4-211ENST00000514893 SMIM7Q9BQ49 75 aa0.17□□□□□ -2.38
NEDD4-211ENST00000514893 LXNQ9BS40 222 aa0.17□□□□□ -2.38
NEDD4-211ENST00000514893 PCBD2Q9H0N5 130 aa0.17□□□□□ -2.38
NEDD4-211ENST00000514893 MRPL36Q9P0J6 103 aaKnown RBP0.17□□□□□ -2.38
NEDD4-211ENST00000514893 COMMD3Q9UBI1 195 aa0.17□□□□□ -2.38
NEDD4-211ENST00000514893 LAMTOR2Q9Y2Q5 125 aa0.17□□□□□ -2.38
NEDD4-211ENST00000514893 RBBP6Q7Z6E9 1792 aaKnown RBP0.17□□□□□ -2.38
NEDD4-211ENST00000514893 FRAS1Q86XX4 4008 aa0.16□□□□□ -2.38
NEDD4-211ENST00000514893 FREM3P0C091 2139 aa0.16□□□□□ -2.38
NEDD4-211ENST00000514893 KDM5CP41229 1560 aa0.16□□□□□ -2.38
NEDD4-211ENST00000514893 SYNE2Q8WXH0 6885 aaKnown RBP0.16□□□□□ -2.38
NEDD4-211ENST00000514893 TMEM189A5PLL7 270 aa0.16□□□□□ -2.38
NEDD4-211ENST00000514893 E7EQ34 232 aa0.16□□□□□ -2.38
NEDD4-211ENST00000514893 GYPBP06028 91 aa0.16□□□□□ -2.38
NEDD4-211ENST00000514893 SLC25A4P12235 298 aa0.16□□□□□ -2.38
NEDD4-211ENST00000514893 CKS2P33552 79 aa0.16□□□□□ -2.38
NEDD4-211ENST00000514893 ETV6P41212 452 aa0.16□□□□□ -2.38
NEDD4-211ENST00000514893 PCBD1P61457 104 aa0.16□□□□□ -2.38
NEDD4-211ENST00000514893 BLCAPP62952 87 aa0.16□□□□□ -2.38
NEDD4-211ENST00000514893 SPINK13Q1W4C9 94 aa0.16□□□□□ -2.38
NEDD4-211ENST00000514893 IDO2Q6ZQW0 420 aa0.16□□□□□ -2.38
NEDD4-211ENST00000514893 C5orf56Q8N8D9 126 aa0.16□□□□□ -2.38
NEDD4-211ENST00000514893 IL20Q9NYY1 176 aa0.16□□□□□ -2.38
NEDD4-211ENST00000514893 RREB1Q92766 1687 aa0.16□□□□□ -2.38
NEDD4-211ENST00000514893 MYH3P11055 1940 aa0.16□□□□□ -2.38
NEDD4-211ENST00000514893 FAM135BQ49AJ0 1406 aa0.15□□□□□ -2.39
NEDD4-211ENST00000514893 TRBV27A0A0K0K1C4 114 aa0.15□□□□□ -2.39
NEDD4-211ENST00000514893 LOC107984640A0A0U1RRK4 108 aa0.15□□□□□ -2.39
NEDD4-211ENST00000514893 A0A1B0GV72 72 aa0.15□□□□□ -2.39
NEDD4-211ENST00000514893 H3BMG7 143 aa0.15□□□□□ -2.39
NEDD4-211ENST00000514893 FAM107AO95990 144 aa0.15□□□□□ -2.39
NEDD4-211ENST00000514893 IGHV3-30P01768 117 aa0.15□□□□□ -2.39
NEDD4-211ENST00000514893 KRTAP2-3P0C7H8 128 aa0.15□□□□□ -2.39
NEDD4-211ENST00000514893 IGHV3-30-5P0DP03 117 aa0.15□□□□□ -2.39
NEDD4-211ENST00000514893 DNAJB13P59910 316 aa0.15□□□□□ -2.39
NEDD4-211ENST00000514893 LSM3P62310 102 aaKnown RBP0.15□□□□□ -2.39
NEDD4-211ENST00000514893 SAMD13Q5VXD3 122 aa0.15□□□□□ -2.39
NEDD4-211ENST00000514893 IZUMO2Q6UXV1 221 aa0.15□□□□□ -2.39
NEDD4-211ENST00000514893 MORN4Q8NDC4 146 aa0.15□□□□□ -2.39
NEDD4-211ENST00000514893 CCL4L1Q8NHW4 92 aa0.15□□□□□ -2.39
NEDD4-211ENST00000514893 KRTAP2-4Q9BYR9 128 aa0.15□□□□□ -2.39
NEDD4-211ENST00000514893 KRTAP2-1Q9BYU5 128 aa0.15□□□□□ -2.39
NEDD4-211ENST00000514893 MED31Q9Y3C7 131 aa0.15□□□□□ -2.39
NEDD4-211ENST00000514893 V9GYQ6 96 aa0.15□□□□□ -2.39
NEDD4-211ENST00000514893 ROCK1Q13464 1354 aa0.15□□□□□ -2.39
NEDD4-211ENST00000514893 SPTBP11277 2137 aa0.14□□□□□ -2.39
NEDD4-211ENST00000514893 TRPM7Q96QT4 1865 aa0.14□□□□□ -2.39
NEDD4-211ENST00000514893 IGHV1-24A0A0C4DH33 117 aa0.14□□□□□ -2.39
NEDD4-211ENST00000514893 A0A0G2JMM0 328 aa0.14□□□□□ -2.39
NEDD4-211ENST00000514893 IFITM5A6NNB3 132 aa0.14□□□□□ -2.39
NEDD4-211ENST00000514893 HIGD1CA8MV81 97 aa0.14□□□□□ -2.39
NEDD4-211ENST00000514893 RPL7P18124 248 aaKnown RBP0.14□□□□□ -2.39
NEDD4-211ENST00000514893 SRP9P49458 86 aaKnown RBP0.14□□□□□ -2.39
NEDD4-211ENST00000514893 POLR2JP52435 117 aaKnown RBP0.14□□□□□ -2.39
NEDD4-211ENST00000514893 RPL37P61927 97 aaKnown RBP0.14□□□□□ -2.39
NEDD4-211ENST00000514893 LYPD5Q6UWN5 251 aa0.14□□□□□ -2.39
NEDD4-211ENST00000514893 OTOSQ8NHW6 89 aa0.14□□□□□ -2.39
NEDD4-211ENST00000514893 ATG5Q9H1Y0 275 aa0.14□□□□□ -2.39
NEDD4-211ENST00000514893 CBLN4Q9NTU7 201 aa0.14□□□□□ -2.39
NEDD4-211ENST00000514893 MRPL35Q9NZE8 188 aaKnown RBP0.14□□□□□ -2.39
NEDD4-211ENST00000514893 ATPIF1Q9UII2 106 aa0.14□□□□□ -2.39
NEDD4-211ENST00000514893 MPC1Q9Y5U8 109 aa0.14□□□□□ -2.39
NEDD4-211ENST00000514893 PBRM1Q86U86 1689 aa0.14□□□□□ -2.39
NEDD4-211ENST00000514893 FAT4Q6V0I7 4981 aa0.14□□□□□ -2.39
NEDD4-211ENST00000514893 FSIP2Q5CZC0 6907 aa0.13□□□□□ -2.39
NEDD4-211ENST00000514893 CACNA1EQ15878 2313 aa0.13□□□□□ -2.39
NEDD4-211ENST00000514893 NBDYA0A0U1RRE5 68 aa0.13□□□□□ -2.39
NEDD4-211ENST00000514893 A0A1W2PRE2 83 aa0.13□□□□□ -2.39
NEDD4-211ENST00000514893 C9JAW5 83 aa0.13□□□□□ -2.39
NEDD4-211ENST00000514893 IGF2P01344 180 aa0.13□□□□□ -2.39
NEDD4-211ENST00000514893 HBDP02042 147 aa0.13□□□□□ -2.39
NEDD4-211ENST00000514893 FABP1P07148 127 aa0.13□□□□□ -2.39
NEDD4-211ENST00000514893 S100GP29377 79 aa0.13□□□□□ -2.39
NEDD4-211ENST00000514893 POLR2HP52434 150 aaKnown RBP0.13□□□□□ -2.39
NEDD4-211ENST00000514893 PSPHP78330 225 aa0.13□□□□□ -2.39
NEDD4-211ENST00000514893 TMEM78Q5T7P6 136 aa0.13□□□□□ -2.39
NEDD4-211ENST00000514893 TMEM35BQ8NCS4 154 aa0.13□□□□□ -2.39
NEDD4-211ENST00000514893 THEM6Q8WUY1 208 aa0.13□□□□□ -2.39
NEDD4-211ENST00000514893 DMAC1Q96GE9 116 aa0.13□□□□□ -2.39
NEDD4-211ENST00000514893 BOLA2Q9H3K6 86 aa0.13□□□□□ -2.39
NEDD4-211ENST00000514893 CALML5Q9NZT1 146 aa0.13□□□□□ -2.39
NEDD4-211ENST00000514893 A2MP01023 1474 aa0.13□□□□□ -2.39
NEDD4-211ENST00000514893 ZCCHC6Q5VYS8 1495 aaKnown RBP0.13□□□□□ -2.39
NEDD4-211ENST00000514893 ATG2AQ2TAZ0 1938 aa0.13□□□□□ -2.39
NEDD4-211ENST00000514893 AFDNP55196 1824 aaKnown RBP0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms