RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 SYNGR2O43760 224 aa2.9□□□□□ -1.95
NIPBL-207ENST00000513819 CST7O76096 145 aa2.9□□□□□ -1.95
NIPBL-207ENST00000513819 LGALS9CQ6DKI2 356 aa2.9□□□□□ -1.95
NIPBL-207ENST00000513819 SCGB1D4Q6XE38 83 aa2.9□□□□□ -1.95
NIPBL-207ENST00000513819 KTN1-AS1Q86SY8 53 aa2.9□□□□□ -1.95
NIPBL-207ENST00000513819 WDR86Q86TI4 376 aa2.9□□□□□ -1.95
NIPBL-207ENST00000513819 RPP25LQ8N5L8 163 aaKnown RBP2.9□□□□□ -1.95
NIPBL-207ENST00000513819 Q8N9W7 124 aa2.9□□□□□ -1.95
NIPBL-207ENST00000513819 NPBQ8NG41 125 aa2.9□□□□□ -1.95
NIPBL-207ENST00000513819 LRRC29Q8WV35 223 aa2.9□□□□□ -1.95
NIPBL-207ENST00000513819 IL36BQ9NZH7 164 aa2.9□□□□□ -1.95
NIPBL-207ENST00000513819 GNG13Q9P2W3 67 aa2.9□□□□□ -1.95
NIPBL-207ENST00000513819 TSC2P49815 1807 aa2.9□□□□□ -1.95
NIPBL-207ENST00000513819 AFDNP55196 1824 aaKnown RBP2.9□□□□□ -1.95
NIPBL-207ENST00000513819 SLX4Q8IY92 1834 aa2.9□□□□□ -1.95
NIPBL-207ENST00000513819 NRAPQ86VF7 1730 aa2.9□□□□□ -1.95
NIPBL-207ENST00000513819 ATRXP46100 2492 aa2.9□□□□□ -1.95
NIPBL-207ENST00000513819 BAZ2AQ9UIF9 1905 aaKnown RBP2.89□□□□□ -1.95
NIPBL-207ENST00000513819 TRAV8-1A0A0A6YYK1 113 aa2.89□□□□□ -1.95
NIPBL-207ENST00000513819 INS-IGF2F8WCM5 200 aa2.89□□□□□ -1.95
NIPBL-207ENST00000513819 LY75O60449 1722 aa2.89□□□□□ -1.95
NIPBL-207ENST00000513819 HLA-DQA1P01909 254 aa2.89□□□□□ -1.95
NIPBL-207ENST00000513819 SCGB1C2P0DMR2 95 aa2.89□□□□□ -1.95
NIPBL-207ENST00000513819 ZNF136P52737 540 aa2.89□□□□□ -1.95
NIPBL-207ENST00000513819 EFNA4P52798 201 aa2.89□□□□□ -1.95
NIPBL-207ENST00000513819 FXYD2P54710 66 aa2.89□□□□□ -1.95
NIPBL-207ENST00000513819 DAD1P61803 113 aa2.89□□□□□ -1.95
NIPBL-207ENST00000513819 CCL8P80075 99 aa2.89□□□□□ -1.95
NIPBL-207ENST00000513819 ZNF117Q03924 483 aa2.89□□□□□ -1.95
NIPBL-207ENST00000513819 C5orf38Q86SI9 138 aa2.89□□□□□ -1.95
NIPBL-207ENST00000513819 DOCK3Q8IZD9 2030 aa2.89□□□□□ -1.95
NIPBL-207ENST00000513819 FAM19A2Q8N3H0 131 aa2.89□□□□□ -1.95
NIPBL-207ENST00000513819 DCANP1Q8TF63 244 aa2.89□□□□□ -1.95
NIPBL-207ENST00000513819 RNF185Q96GF1 192 aa2.89□□□□□ -1.95
NIPBL-207ENST00000513819 MGST2Q99735 147 aa2.89□□□□□ -1.95
NIPBL-207ENST00000513819 CHAC1Q9BUX1 264 aa2.89□□□□□ -1.95
NIPBL-207ENST00000513819 CYSTM1Q9H1C7 97 aa2.89□□□□□ -1.95
NIPBL-207ENST00000513819 CXCL16Q9H2A7 254 aa2.89□□□□□ -1.95
NIPBL-207ENST00000513819 CKLFQ9UBR5 152 aa2.89□□□□□ -1.95
NIPBL-207ENST00000513819 ANAPC10Q9UM13 185 aa2.89□□□□□ -1.95
NIPBL-207ENST00000513819 COL1A1P02452 1464 aaPredicted RBP2.89□□□□□ -1.95
NIPBL-207ENST00000513819 PATJQ8NI35 1801 aa2.89□□□□□ -1.95
NIPBL-207ENST00000513819 SCN7AQ01118 1682 aa2.88□□□□□ -1.95
NIPBL-207ENST00000513819 SCN1AP35498 2009 aa2.88□□□□□ -1.95
NIPBL-207ENST00000513819 KIF26AQ9ULI4 1882 aaPredicted RBP2.88□□□□□ -1.95
NIPBL-207ENST00000513819 TCRBV4S1A1TA0A5B7 111 aa2.88□□□□□ -1.95
NIPBL-207ENST00000513819 PINLYPA6NC86 204 aa2.88□□□□□ -1.95
NIPBL-207ENST00000513819 PGPA6NDG6 321 aa2.88□□□□□ -1.95
NIPBL-207ENST00000513819 CEBPZOSA8MTT3 80 aa2.88□□□□□ -1.95
NIPBL-207ENST00000513819 K7ERJ3 54 aa2.88□□□□□ -1.95
NIPBL-207ENST00000513819 UPK2O00526 184 aa2.88□□□□□ -1.95
NIPBL-207ENST00000513819 NDUFS5O43920 106 aa2.88□□□□□ -1.95
NIPBL-207ENST00000513819 WISP3O95389 354 aaPredicted RBP2.88□□□□□ -1.95
NIPBL-207ENST00000513819 PEBP1P30086 187 aaKnown RBP2.88□□□□□ -1.95
NIPBL-207ENST00000513819 MYCNOSP40205 109 aa2.88□□□□□ -1.95
NIPBL-207ENST00000513819 UBE2D3P61077 147 aa2.88□□□□□ -1.95
NIPBL-207ENST00000513819 UBE2D2P62837 147 aa2.88□□□□□ -1.95
NIPBL-207ENST00000513819 DEFB121Q5J5C9 76 aa2.88□□□□□ -1.95
NIPBL-207ENST00000513819 LINC00173Q6ZV60 143 aa2.88□□□□□ -1.95
NIPBL-207ENST00000513819 MKXQ8IYA7 352 aa2.88□□□□□ -1.95
NIPBL-207ENST00000513819 SERP2Q8N6R1 65 aa2.88□□□□□ -1.95
NIPBL-207ENST00000513819 CHCHD1Q96BP2 118 aaKnown RBP2.88□□□□□ -1.95
NIPBL-207ENST00000513819 C11orf68Q9H3H3 251 aaKnown RBP2.88□□□□□ -1.95
NIPBL-207ENST00000513819 LINC00527Q9UJ94 153 aa2.88□□□□□ -1.95
NIPBL-207ENST00000513819 BTAF1O14981 1849 aa2.88□□□□□ -1.95
NIPBL-207ENST00000513819 SCN2AQ99250 2005 aa2.88□□□□□ -1.95
NIPBL-207ENST00000513819 LMO7Q8WWI1 1683 aa2.88□□□□□ -1.95
NIPBL-207ENST00000513819 GBF1Q92538 1859 aa2.88□□□□□ -1.95
NIPBL-207ENST00000513819 PLXNA4Q9HCM2 1894 aa2.88□□□□□ -1.95
NIPBL-207ENST00000513819 TIAM2Q8IVF5 1701 aa2.88□□□□□ -1.95
NIPBL-207ENST00000513819 NRXN3Q9Y4C0 1643 aa2.87□□□□□ -1.95
NIPBL-207ENST00000513819 CITO14578 2027 aa2.87□□□□□ -1.95
NIPBL-207ENST00000513819 TRBV27A0A0K0K1C4 114 aa2.87□□□□□ -1.95
NIPBL-207ENST00000513819 F6UB75 175 aa2.87□□□□□ -1.95
NIPBL-207ENST00000513819 M0R378 163 aa2.87□□□□□ -1.95
NIPBL-207ENST00000513819 CCL16O15467 120 aa2.87□□□□□ -1.95
NIPBL-207ENST00000513819 IGHV3-43DP0DP04 118 aa2.87□□□□□ -1.95
NIPBL-207ENST00000513819 CXCL8P10145 99 aa2.87□□□□□ -1.95
NIPBL-207ENST00000513819 ZNF823P16415 610 aa2.87□□□□□ -1.95
NIPBL-207ENST00000513819 GCHFRP30047 84 aa2.87□□□□□ -1.95
NIPBL-207ENST00000513819 SNRPD3P62318 126 aaKnown RBP2.87□□□□□ -1.95
NIPBL-207ENST00000513819 DYNLT1P63172 113 aa2.87□□□□□ -1.95
NIPBL-207ENST00000513819 RPS21P63220 83 aaKnown RBP2.87□□□□□ -1.95
NIPBL-207ENST00000513819 UBE2L3P68036 154 aaKnown RBP2.87□□□□□ -1.95
NIPBL-207ENST00000513819 ZNF816Q0VGE8 651 aaPredicted RBP2.87□□□□□ -1.95
NIPBL-207ENST00000513819 ORMDL2Q53FV1 153 aa2.87□□□□□ -1.95
NIPBL-207ENST00000513819 CENPWQ5EE01 88 aa2.87□□□□□ -1.95
NIPBL-207ENST00000513819 TMEM170BQ5T4T1 132 aa2.87□□□□□ -1.95
NIPBL-207ENST00000513819 CEMP1Q6PRD7 247 aaPredicted RBP2.87□□□□□ -1.95
NIPBL-207ENST00000513819 C6orf201Q7Z4U5 140 aa2.87□□□□□ -1.95
NIPBL-207ENST00000513819 ATP5L2Q7Z4Y8 100 aa2.87□□□□□ -1.95
NIPBL-207ENST00000513819 VN1R4Q7Z5H5 301 aa2.87□□□□□ -1.95
NIPBL-207ENST00000513819 LINC00596Q86U02 117 aa2.87□□□□□ -1.95
NIPBL-207ENST00000513819 Q8N2B8 174 aa2.87□□□□□ -1.95
NIPBL-207ENST00000513819 CCL17Q92583 94 aa2.87□□□□□ -1.95
NIPBL-207ENST00000513819 TMEM230Q96A57 120 aa2.87□□□□□ -1.95
NIPBL-207ENST00000513819 SPACA5Q96QH8 159 aa2.87□□□□□ -1.95
NIPBL-207ENST00000513819 C11orf1Q9H5F2 150 aa2.87□□□□□ -1.95
NIPBL-207ENST00000513819 ZNF286AQ9HBT8 521 aa2.87□□□□□ -1.95
NIPBL-207ENST00000513819 NXT2Q9NPJ8 142 aaKnown RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms