RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 C1orf196B1AJZ1 125 aa7.43□□□□□ -1.22
TPM3-221ENST00000513769 DUSP14O95147 198 aaKnown RBP7.43□□□□□ -1.22
TPM3-221ENST00000513769 SLURP1P55000 103 aa7.43□□□□□ -1.22
TPM3-221ENST00000513769 FAM3BP58499 235 aaPredicted RBP7.43□□□□□ -1.22
TPM3-221ENST00000513769 HIST1H1AQ02539 215 aaPredicted RBP7.43□□□□□ -1.22
TPM3-221ENST00000513769 KHDC1LQ5JSQ8 128 aa7.43□□□□□ -1.22
TPM3-221ENST00000513769 FAM162BQ5T6X4 162 aa7.43□□□□□ -1.22
TPM3-221ENST00000513769 Q6AWC8 147 aa7.43□□□□□ -1.22
TPM3-221ENST00000513769 SGK494Q96LW2 274 aa7.43□□□□□ -1.22
TPM3-221ENST00000513769 ODF3Q96PU9 254 aa7.43□□□□□ -1.22
TPM3-221ENST00000513769 VGLL1Q99990 258 aa7.43□□□□□ -1.22
TPM3-221ENST00000513769 RNASE7Q9H1E1 156 aaKnown RBP7.43□□□□□ -1.22
TPM3-221ENST00000513769 URGCP-MRPS24S4R325 110 aa7.43□□□□□ -1.22
TPM3-221ENST00000513769 IZUMO1RA6ND01 250 aa7.42□□□□□ -1.22
TPM3-221ENST00000513769 PF4P02776 101 aa7.42□□□□□ -1.22
TPM3-221ENST00000513769 RPS10P46783 165 aaKnown RBP7.42□□□□□ -1.22
TPM3-221ENST00000513769 IGFL4Q6B9Z1 124 aa7.42□□□□□ -1.22
TPM3-221ENST00000513769 ADAMTSL5Q6ZMM2 481 aa7.42□□□□□ -1.22
TPM3-221ENST00000513769 C18orf65Q6ZTR6 163 aa7.42□□□□□ -1.22
TPM3-221ENST00000513769 ATP5L2Q7Z4Y8 100 aa7.42□□□□□ -1.22
TPM3-221ENST00000513769 GBGT1Q8N5D6 347 aa7.42□□□□□ -1.22
TPM3-221ENST00000513769 RNF182Q8N6D2 247 aa7.42□□□□□ -1.22
TPM3-221ENST00000513769 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.42□□□□□ -1.22
TPM3-221ENST00000513769 ZNF738Q8NE65 137 aa7.42□□□□□ -1.22
TPM3-221ENST00000513769 OR8A1Q8NGG7 326 aa7.42□□□□□ -1.22
TPM3-221ENST00000513769 CLUHP3Q96NS8 147 aa7.42□□□□□ -1.22
TPM3-221ENST00000513769 SPAG8Q99932 426 aaPredicted RBP7.42□□□□□ -1.22
TPM3-221ENST00000513769 FAM110AQ9BQ89 295 aa7.42□□□□□ -1.22
TPM3-221ENST00000513769 GNB1LQ9BYB4 327 aa7.42□□□□□ -1.22
TPM3-221ENST00000513769 RPP21Q9H633 154 aaKnown RBP7.42□□□□□ -1.22
TPM3-221ENST00000513769 A0A1B0GW15 77 aa7.41□□□□□ -1.22
TPM3-221ENST00000513769 A0A1W2PPQ1 181 aa7.41□□□□□ -1.22
TPM3-221ENST00000513769 PRAC2D3DTV9 90 aa7.41□□□□□ -1.22
TPM3-221ENST00000513769 CXCL1P09341 107 aa7.41□□□□□ -1.22
TPM3-221ENST00000513769 CRISP2P16562 243 aa7.41□□□□□ -1.22
TPM3-221ENST00000513769 CRIP1P50238 77 aa7.41□□□□□ -1.22
TPM3-221ENST00000513769 INSL3P51460 131 aa7.41□□□□□ -1.22
TPM3-221ENST00000513769 RAB5BP61020 215 aa7.41□□□□□ -1.22
TPM3-221ENST00000513769 DEFB136Q30KP8 78 aa7.41□□□□□ -1.22
TPM3-221ENST00000513769 KRTAP24-1Q3LI83 254 aa7.41□□□□□ -1.22
TPM3-221ENST00000513769 EBLN2Q6P2I7 272 aa7.41□□□□□ -1.22
TPM3-221ENST00000513769 WDR73Q6P4I2 378 aa7.41□□□□□ -1.22
TPM3-221ENST00000513769 APRG1Q8IVJ8 170 aa7.41□□□□□ -1.22
TPM3-221ENST00000513769 ZC2HC1AQ96GY0 325 aa7.41□□□□□ -1.22
TPM3-221ENST00000513769 FAM19A4Q96LR4 140 aa7.41□□□□□ -1.22
TPM3-221ENST00000513769 KRTAP4-9Q9BYQ8 210 aa7.41□□□□□ -1.22
TPM3-221ENST00000513769 IGKV2-40A0A087WW87 121 aaPredicted RBP7.4□□□□□ -1.22
TPM3-221ENST00000513769 TGIF2-C20orf24A0A0A6YYL0 155 aa7.4□□□□□ -1.22
TPM3-221ENST00000513769 OR4C46A6NHA9 309 aa7.4□□□□□ -1.22
TPM3-221ENST00000513769 F2Z2F3 143 aa7.4□□□□□ -1.22
TPM3-221ENST00000513769 IGKV2D-40P01614 121 aaPredicted RBP7.4□□□□□ -1.22
TPM3-221ENST00000513769 MT-ND6P03923 174 aa7.4□□□□□ -1.22
TPM3-221ENST00000513769 HLA-DMBP28068 263 aa7.4□□□□□ -1.22
TPM3-221ENST00000513769 PRR27Q6MZM9 219 aa7.4□□□□□ -1.22
TPM3-221ENST00000513769 LINC00322Q6ZN03 302 aaPredicted RBP7.4□□□□□ -1.22
TPM3-221ENST00000513769 NHLRC2Q8NBF2 726 aa7.4□□□□□ -1.22
TPM3-221ENST00000513769 C20orf173Q96LM9 149 aa7.4□□□□□ -1.22
TPM3-221ENST00000513769 TMEM189A5PLL7 270 aa7.39□□□□□ -1.23
TPM3-221ENST00000513769 S100A8P05109 93 aa7.39□□□□□ -1.23
TPM3-221ENST00000513769 TSPOP30536 169 aa7.39□□□□□ -1.23
TPM3-221ENST00000513769 ERCC8Q13216 396 aa7.39□□□□□ -1.23
TPM3-221ENST00000513769 FOXI2Q6ZQN5 318 aa7.39□□□□□ -1.23
TPM3-221ENST00000513769 NUP35Q8NFH5 326 aa7.39□□□□□ -1.23
TPM3-221ENST00000513769 OR2D3Q8NGH3 330 aa7.39□□□□□ -1.23
TPM3-221ENST00000513769 DYNLRB2Q8TF09 96 aa7.39□□□□□ -1.23
TPM3-221ENST00000513769 TRAV21A0A0B4J279 112 aa7.38□□□□□ -1.23
TPM3-221ENST00000513769 A0A0J9YX75 114 aa7.38□□□□□ -1.23
TPM3-221ENST00000513769 A8MTW9 85 aa7.38□□□□□ -1.23
TPM3-221ENST00000513769 HIGD1CA8MV81 97 aa7.38□□□□□ -1.23
TPM3-221ENST00000513769 GPX1P07203 203 aa7.38□□□□□ -1.23
TPM3-221ENST00000513769 MED14OSP0DP75 135 aa7.38□□□□□ -1.23
TPM3-221ENST00000513769 C8orf49Q96NF6 230 aa7.38□□□□□ -1.23
TPM3-221ENST00000513769 CITED1Q99966 193 aa7.38□□□□□ -1.23
TPM3-221ENST00000513769 IGKV3-7A0A075B6H7 116 aa7.37□□□□□ -1.23
TPM3-221ENST00000513769 KLLNB2CW77 178 aa7.37□□□□□ -1.23
TPM3-221ENST00000513769 SH2D1AO60880 128 aa7.37□□□□□ -1.23
TPM3-221ENST00000513769 IGLV1-51P01701 117 aa7.37□□□□□ -1.23
TPM3-221ENST00000513769 HLA-DQA1P01909 254 aa7.37□□□□□ -1.23
TPM3-221ENST00000513769 TRGC2P03986 189 aa7.37□□□□□ -1.23
TPM3-221ENST00000513769 LEPP41159 167 aa7.37□□□□□ -1.23
TPM3-221ENST00000513769 RIGQ13278 110 aa7.37□□□□□ -1.23
TPM3-221ENST00000513769 CD300EQ496F6 205 aaPredicted RBP7.37□□□□□ -1.23
TPM3-221ENST00000513769 PSMG4Q5JS54 123 aa7.37□□□□□ -1.23
TPM3-221ENST00000513769 DNLZQ5SXM8 178 aa7.37□□□□□ -1.23
TPM3-221ENST00000513769 C11orf44Q8N8P7 122 aa7.37□□□□□ -1.23
TPM3-221ENST00000513769 BORCS7Q96B45 105 aa7.37□□□□□ -1.23
TPM3-221ENST00000513769 NEU1Q99519 415 aa7.37□□□□□ -1.23
TPM3-221ENST00000513769 MCRIP2Q9BUT9 160 aaKnown RBP7.37□□□□□ -1.23
TPM3-221ENST00000513769 ZNF256Q9Y2P7 627 aaPredicted RBP7.37□□□□□ -1.23
TPM3-221ENST00000513769 TRAPPC1Q9Y5R8 145 aa7.37□□□□□ -1.23
TPM3-221ENST00000513769 A0A1B0GUT8 65 aa7.36□□□□□ -1.23
TPM3-221ENST00000513769 A0A1W2PRX2 142 aa7.36□□□□□ -1.23
TPM3-221ENST00000513769 ORM1P02763 201 aa7.36□□□□□ -1.23
TPM3-221ENST00000513769 EDN2P20800 178 aa7.36□□□□□ -1.23
TPM3-221ENST00000513769 KRTAP10-3P60369 221 aa7.36□□□□□ -1.23
TPM3-221ENST00000513769 TMEM61Q8N0U2 210 aa7.36□□□□□ -1.23
TPM3-221ENST00000513769 ZFAND2AQ8N6M9 145 aa7.36□□□□□ -1.23
TPM3-221ENST00000513769 WFDC9Q8NEX5 89 aa7.36□□□□□ -1.23
TPM3-221ENST00000513769 GTSF1Q8WW33 167 aa7.36□□□□□ -1.23
TPM3-221ENST00000513769 KCNS1Q96KK3 526 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms