RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 FXYD2P54710 66 aa6.13□□□□□ -1.43
CLCN3-209ENST00000513761 ITLN2Q8WWU7 325 aaPredicted RBP6.13□□□□□ -1.43
CLCN3-209ENST00000513761 PLXNB1O43157 2135 aa6.13□□□□□ -1.43
CLCN3-209ENST00000513761 TRBV25-1A0A075B6N4 114 aa6.13□□□□□ -1.43
CLCN3-209ENST00000513761 G3V318 75 aa6.13□□□□□ -1.43
CLCN3-209ENST00000513761 LHBP01229 141 aa6.13□□□□□ -1.43
CLCN3-209ENST00000513761 LINC00322Q6ZN03 302 aaPredicted RBP6.13□□□□□ -1.43
CLCN3-209ENST00000513761 LINC00477Q96M19 166 aa6.13□□□□□ -1.43
CLCN3-209ENST00000513761 LINC01587Q99440 93 aa6.13□□□□□ -1.43
CLCN3-209ENST00000513761 SPXQ9BT56 116 aa6.13□□□□□ -1.43
CLCN3-209ENST00000513761 CTSZQ9UBR2 303 aa6.13□□□□□ -1.43
CLCN3-209ENST00000513761 HLA-DRB4P13762 266 aa6.13□□□□□ -1.43
CLCN3-209ENST00000513761 BRD3OSQ6XYD6 125 aa6.13□□□□□ -1.43
CLCN3-209ENST00000513761 Q6ZS92 163 aa6.13□□□□□ -1.43
CLCN3-209ENST00000513761 HLA-DRB4X5D2U9 266 aa6.13□□□□□ -1.43
CLCN3-209ENST00000513761 CTRLP40313 264 aa6.12□□□□□ -1.43
CLCN3-209ENST00000513761 F8VRH5 84 aa6.12□□□□□ -1.43
CLCN3-209ENST00000513761 ATP6V0E1O15342 81 aa6.12□□□□□ -1.43
CLCN3-209ENST00000513761 FAM215AQ9Y5M1 114 aa6.12□□□□□ -1.43
CLCN3-209ENST00000513761 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.12□□□□□ -1.43
CLCN3-209ENST00000513761 WISP2O76076 250 aa6.12□□□□□ -1.43
CLCN3-209ENST00000513761 TRBV7-9A0A0J9YWB2 115 aa6.12□□□□□ -1.43
CLCN3-209ENST00000513761 DYNAPQ8N1N2 210 aa6.12□□□□□ -1.43
CLCN3-209ENST00000513761 WFDC2Q14508 124 aa6.12□□□□□ -1.43
CLCN3-209ENST00000513761 ATXN8Q156A1 80 aa6.12□□□□□ -1.43
CLCN3-209ENST00000513761 C3orf36Q3SXR2 165 aa6.12□□□□□ -1.43
CLCN3-209ENST00000513761 TRBV7-1A0A0A6YYK4 115 aa6.11□□□□□ -1.43
CLCN3-209ENST00000513761 IGKV1-17P01599 117 aa6.11□□□□□ -1.43
CLCN3-209ENST00000513761 C1orf229Q6ZS94 237 aaPredicted RBP6.11□□□□□ -1.43
CLCN3-209ENST00000513761 C8orf86Q6ZUL3 223 aa6.11□□□□□ -1.43
CLCN3-209ENST00000513761 SPATA12Q7Z6I5 190 aa6.11□□□□□ -1.43
CLCN3-209ENST00000513761 LOXL1Q08397 574 aaPredicted RBP6.11□□□□□ -1.43
CLCN3-209ENST00000513761 MSMPQ1L6U9 139 aa6.11□□□□□ -1.43
CLCN3-209ENST00000513761 MINOS1Q5TGZ0 78 aa6.11□□□□□ -1.43
CLCN3-209ENST00000513761 SMIM2Q9BVW6 85 aa6.11□□□□□ -1.43
CLCN3-209ENST00000513761 MINOS1-NBL1R4GNA1 71 aa6.11□□□□□ -1.43
CLCN3-209ENST00000513761 EML5Q05BV3 1969 aa6.11□□□□□ -1.43
CLCN3-209ENST00000513761 TRAV8-3A0A0A6YYJ7 113 aa6.11□□□□□ -1.43
CLCN3-209ENST00000513761 PPDPFLQ8WWR9 84 aa6.11□□□□□ -1.43
CLCN3-209ENST00000513761 M0R1W7 72 aa6.11□□□□□ -1.43
CLCN3-209ENST00000513761 PRSS33Q8NF86 280 aa6.11□□□□□ -1.43
CLCN3-209ENST00000513761 CFHR4Q92496 578 aa6.11□□□□□ -1.43
CLCN3-209ENST00000513761 PLEKHB2Q96CS7 222 aa6.11□□□□□ -1.43
CLCN3-209ENST00000513761 KLF12Q9Y4X4 402 aa6.11□□□□□ -1.43
CLCN3-209ENST00000513761 A0A087WX48 190 aa6.11□□□□□ -1.43
CLCN3-209ENST00000513761 SAA4P35542 130 aa6.11□□□□□ -1.43
CLCN3-209ENST00000513761 TCF15Q12870 199 aa6.11□□□□□ -1.43
CLCN3-209ENST00000513761 DAZAP2Q15038 168 aaPredicted RBP6.11□□□□□ -1.43
CLCN3-209ENST00000513761 CCL19Q99731 98 aa6.11□□□□□ -1.43
CLCN3-209ENST00000513761 MOB4Q9Y3A3 225 aa6.11□□□□□ -1.43
CLCN3-209ENST00000513761 RBX1P62877 108 aa6.1□□□□□ -1.43
CLCN3-209ENST00000513761 PRR30Q53SZ7 412 aaPredicted RBP6.1□□□□□ -1.43
CLCN3-209ENST00000513761 LTBP2Q14767 1821 aa6.1□□□□□ -1.43
CLCN3-209ENST00000513761 IGLL5B9A064 214 aa6.1□□□□□ -1.43
CLCN3-209ENST00000513761 UCNP55089 124 aa6.1□□□□□ -1.43
CLCN3-209ENST00000513761 RHPN1-AS1Q9BWJ2 59 aa6.1□□□□□ -1.43
CLCN3-209ENST00000513761 FOXE3Q13461 319 aa6.1□□□□□ -1.43
CLCN3-209ENST00000513761 YAE1D1Q9NRH1 226 aa6.1□□□□□ -1.43
CLCN3-209ENST00000513761 A0A1B0GXF2 115 aa6.1□□□□□ -1.43
CLCN3-209ENST00000513761 ANXA2RQ3ZCQ2 193 aa6.1□□□□□ -1.43
CLCN3-209ENST00000513761 OOSP1A8MZH6 123 aa6.1□□□□□ -1.43
CLCN3-209ENST00000513761 EIF4EBP1Q13541 118 aaPredicted RBP6.1□□□□□ -1.43
CLCN3-209ENST00000513761 TTC28Q96AY4 2481 aa6.1□□□□□ -1.43
CLCN3-209ENST00000513761 TMEM101Q96IK0 257 aa6.1□□□□□ -1.43
CLCN3-209ENST00000513761 C19orf71A6NCJ1 209 aa6.09□□□□□ -1.43
CLCN3-209ENST00000513761 I3L2K1 104 aa6.09□□□□□ -1.43
CLCN3-209ENST00000513761 BOD1L2Q8IYS8 172 aa6.09□□□□□ -1.43
CLCN3-209ENST00000513761 K7EIM0 57 aa6.09□□□□□ -1.43
CLCN3-209ENST00000513761 OVOL3O00110 214 aa6.09□□□□□ -1.43
CLCN3-209ENST00000513761 FGF6P10767 208 aa6.09□□□□□ -1.43
CLCN3-209ENST00000513761 LINC00310P59036 64 aa6.09□□□□□ -1.43
CLCN3-209ENST00000513761 PMVKQ15126 192 aa6.09□□□□□ -1.43
CLCN3-209ENST00000513761 TIMM21Q9BVV7 248 aa6.09□□□□□ -1.43
CLCN3-209ENST00000513761 TANC2Q9HCD6 1990 aa6.09□□□□□ -1.43
CLCN3-209ENST00000513761 IGKV1D-37A0A075B6S9 117 aa6.09□□□□□ -1.43
CLCN3-209ENST00000513761 TAL2Q16559 108 aa6.09□□□□□ -1.43
CLCN3-209ENST00000513761 AGPAT4-IT1Q9H0P7 198 aa6.09□□□□□ -1.43
CLCN3-209ENST00000513761 TRBV20-1A0A075B6N2 111 aa6.09□□□□□ -1.43
CLCN3-209ENST00000513761 PRSS29PA6NIE9 313 aa6.09□□□□□ -1.44
CLCN3-209ENST00000513761 G3V4G9 280 aa6.09□□□□□ -1.44
CLCN3-209ENST00000513761 ZNF625Q96I27 306 aaPredicted RBP6.09□□□□□ -1.44
CLCN3-209ENST00000513761 DSCAML1Q8TD84 2053 aa6.09□□□□□ -1.44
CLCN3-209ENST00000513761 SDHAF1A6NFY7 115 aa6.08□□□□□ -1.44
CLCN3-209ENST00000513761 H3BUX3 64 aa6.08□□□□□ -1.44
CLCN3-209ENST00000513761 WT1P19544 449 aaPredicted RBP6.08□□□□□ -1.44
CLCN3-209ENST00000513761 FOXI2Q6ZQN5 318 aa6.08□□□□□ -1.44
CLCN3-209ENST00000513761 OR11H6Q8NGC7 330 aa6.08□□□□□ -1.44
CLCN3-209ENST00000513761 FAM110DQ8TAY7 271 aaPredicted RBP6.08□□□□□ -1.44
CLCN3-209ENST00000513761 DKK4Q9UBT3 224 aa6.08□□□□□ -1.44
CLCN3-209ENST00000513761 MUC22E2RYF6 1773 aaPredicted RBP6.08□□□□□ -1.44
CLCN3-209ENST00000513761 TNRC6AQ8NDV7 1962 aaKnown RBP6.08□□□□□ -1.44
CLCN3-209ENST00000513761 IGLV2-23P01705 113 aa6.08□□□□□ -1.44
CLCN3-209ENST00000513761 NCKAP5O14513 1909 aa6.08□□□□□ -1.44
CLCN3-209ENST00000513761 TRGV11A0A075B6L2 103 aa6.08□□□□□ -1.44
CLCN3-209ENST00000513761 PHLDA1Q8WV24 401 aaPredicted RBP6.08□□□□□ -1.44
CLCN3-209ENST00000513761 KNCNA6PVL3 124 aa6.08□□□□□ -1.44
CLCN3-209ENST00000513761 DUSP14O95147 198 aaKnown RBP6.08□□□□□ -1.44
CLCN3-209ENST00000513761 MBD6Q96DN6 1003 aa6.08□□□□□ -1.44
CLCN3-209ENST00000513761 PRO1854Q9UHT4 67 aa6.08□□□□□ -1.44
CLCN3-209ENST00000513761 HCFC1P51610 2035 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms