RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 TMEM116Q8NCL8 245 aa12.53□□□□□ -0.4
HMGCL-209ENST00000513148 MS4A6AQ9H2W1 248 aa12.53□□□□□ -0.4
HMGCL-209ENST00000513148 PEMTQ9UBM1 199 aa12.53□□□□□ -0.4
HMGCL-209ENST00000513148 YTHDF2Q9Y5A9 579 aaKnown RBP12.53□□□□□ -0.4
HMGCL-209ENST00000513148 PRSS46E5RG02 174 aa12.52□□□□□ -0.4
HMGCL-209ENST00000513148 HSBP1O75506 76 aa12.52□□□□□ -0.4
HMGCL-209ENST00000513148 IGLC1P0CG04 106 aa12.52□□□□□ -0.4
HMGCL-209ENST00000513148 CRYBB3P26998 211 aa12.52□□□□□ -0.4
HMGCL-209ENST00000513148 TIGITQ495A1 244 aa12.52□□□□□ -0.4
HMGCL-209ENST00000513148 AMMECR1LQ6DCA0 310 aa12.52□□□□□ -0.4
HMGCL-209ENST00000513148 SLC25A34Q6PIV7 304 aa12.52□□□□□ -0.4
HMGCL-209ENST00000513148 CACNG8Q8WXS5 425 aa12.52□□□□□ -0.4
HMGCL-209ENST00000513148 TMEM70Q9BUB7 260 aa12.52□□□□□ -0.4
HMGCL-209ENST00000513148 RNF24Q9Y225 148 aa12.52□□□□□ -0.4
HMGCL-209ENST00000513148 NOTCH1P46531 2555 aa12.52□□□□□ -0.41
HMGCL-209ENST00000513148 FRMD6-AS1P0C7T7 363 aa12.52□□□□□ -0.41
HMGCL-209ENST00000513148 GNG4P50150 75 aa12.52□□□□□ -0.41
HMGCL-209ENST00000513148 TM4SF20Q53R12 229 aa12.52□□□□□ -0.41
HMGCL-209ENST00000513148 EBLN2Q6P2I7 272 aa12.52□□□□□ -0.41
HMGCL-209ENST00000513148 PMCHL2Q9BQD1 86 aa12.52□□□□□ -0.41
HMGCL-209ENST00000513148 SELENOKQ9Y6D0 94 aa12.52□□□□□ -0.41
HMGCL-209ENST00000513148 HELTA6NFD8 242 aa12.51□□□□□ -0.41
HMGCL-209ENST00000513148 LGALS9O00182 355 aa12.51□□□□□ -0.41
HMGCL-209ENST00000513148 NDUFA4O00483 81 aa12.51□□□□□ -0.41
HMGCL-209ENST00000513148 ZNF207O43670 478 aaKnown RBP12.51□□□□□ -0.41
HMGCL-209ENST00000513148 SCGB2A1O75556 95 aa12.51□□□□□ -0.41
HMGCL-209ENST00000513148 FAM19A2Q8N3H0 131 aa12.51□□□□□ -0.41
HMGCL-209ENST00000513148 TMEM190Q8WZ59 177 aa12.51□□□□□ -0.41
HMGCL-209ENST00000513148 ZNF414Q96IQ9 312 aa12.51□□□□□ -0.41
HMGCL-209ENST00000513148 ZNF331Q9NQX6 463 aaPredicted RBP12.51□□□□□ -0.41
HMGCL-209ENST00000513148 NUDT3O95989 172 aa12.5□□□□□ -0.41
HMGCL-209ENST00000513148 IGKV1-17P01599 117 aa12.5□□□□□ -0.41
HMGCL-209ENST00000513148 CSN3P07498 182 aa12.5□□□□□ -0.41
HMGCL-209ENST00000513148 PSG9Q00887 426 aa12.5□□□□□ -0.41
HMGCL-209ENST00000513148 LCN12Q6JVE5 192 aa12.5□□□□□ -0.41
HMGCL-209ENST00000513148 TMEM213A2RRL7 107 aa12.5□□□□□ -0.41
HMGCL-209ENST00000513148 M0R2Z0 102 aa12.5□□□□□ -0.41
HMGCL-209ENST00000513148 NTF3P20783 257 aa12.5□□□□□ -0.41
HMGCL-209ENST00000513148 SEC11AP67812 179 aa12.5□□□□□ -0.41
HMGCL-209ENST00000513148 HIST1H1AQ02539 215 aaPredicted RBP12.5□□□□□ -0.41
HMGCL-209ENST00000513148 GCSAMLQ5JQS6 135 aa12.5□□□□□ -0.41
HMGCL-209ENST00000513148 GTF2H5Q6ZYL4 71 aa12.5□□□□□ -0.41
HMGCL-209ENST00000513148 GGTLC1Q9BX51 225 aa12.5□□□□□ -0.41
HMGCL-209ENST00000513148 TMEM167BQ9NRX6 74 aa12.5□□□□□ -0.41
HMGCL-209ENST00000513148 PRSS47A8MTI9 375 aa12.49□□□□□ -0.41
HMGCL-209ENST00000513148 SMIM17P0DL12 118 aa12.49□□□□□ -0.41
HMGCL-209ENST00000513148 PSG3Q16557 428 aa12.49□□□□□ -0.41
HMGCL-209ENST00000513148 KIAA1644Q3SXP7 199 aa12.49□□□□□ -0.41
HMGCL-209ENST00000513148 ATOH7Q8N100 152 aa12.49□□□□□ -0.41
HMGCL-209ENST00000513148 UFC1Q9Y3C8 167 aa12.49□□□□□ -0.41
HMGCL-209ENST00000513148 LSM4Q9Y4Z0 139 aaKnown RBP12.49□□□□□ -0.41
HMGCL-209ENST00000513148 PRB2P02812 416 aaPredicted RBP12.49□□□□□ -0.41
HMGCL-209ENST00000513148 INSL3P51460 131 aa12.49□□□□□ -0.41
HMGCL-209ENST00000513148 BEAN1Q3B7T3 259 aa12.49□□□□□ -0.41
HMGCL-209ENST00000513148 UFSP1Q6NVU6 142 aa12.49□□□□□ -0.41
HMGCL-209ENST00000513148 ADAMTSL5Q6ZMM2 481 aa12.49□□□□□ -0.41
HMGCL-209ENST00000513148 FAM231DQ6ZW35 169 aa12.49□□□□□ -0.41
HMGCL-209ENST00000513148 DAZ1Q9NQZ3 744 aaKnown RBP12.49□□□□□ -0.41
HMGCL-209ENST00000513148 FNDC10F2Z333 226 aa12.48□□□□□ -0.41
HMGCL-209ENST00000513148 CENPWQ5EE01 88 aa12.48□□□□□ -0.41
HMGCL-209ENST00000513148 FER1L6-AS1Q8NA97 138 aa12.48□□□□□ -0.41
HMGCL-209ENST00000513148 DYNLRB2Q8TF09 96 aa12.48□□□□□ -0.41
HMGCL-209ENST00000513148 IGKV1OR2-108A0A075B7D4 117 aa12.47□□□□□ -0.41
HMGCL-209ENST00000513148 OR5AL1P0C617 328 aa12.47□□□□□ -0.41
HMGCL-209ENST00000513148 KRTAP10-11P60412 298 aa12.47□□□□□ -0.41
HMGCL-209ENST00000513148 ATP5L2Q7Z4Y8 100 aa12.47□□□□□ -0.41
HMGCL-209ENST00000513148 CHCHD1Q96BP2 118 aaKnown RBP12.47□□□□□ -0.41
HMGCL-209ENST00000513148 MGST2Q99735 147 aa12.47□□□□□ -0.41
HMGCL-209ENST00000513148 ZFAND3Q9H8U3 227 aa12.47□□□□□ -0.41
HMGCL-209ENST00000513148 NPVFQ9HCQ7 196 aa12.47□□□□□ -0.41
HMGCL-209ENST00000513148 FBN3Q75N90 2809 aa12.47□□□□□ -0.41
HMGCL-209ENST00000513148 IGKV1D-37A0A075B6S9 117 aa12.47□□□□□ -0.41
HMGCL-209ENST00000513148 IGHV3-49A0A0A0MS15 119 aa12.47□□□□□ -0.41
HMGCL-209ENST00000513148 OR4C46A6NHA9 309 aa12.47□□□□□ -0.41
HMGCL-209ENST00000513148 TMEM191AQ9H0A3 160 aa12.47□□□□□ -0.41
HMGCL-209ENST00000513148 WIPF1O43516 503 aa12.46□□□□□ -0.41
HMGCL-209ENST00000513148 OR7C2O60412 319 aa12.46□□□□□ -0.41
HMGCL-209ENST00000513148 S100A7P31151 101 aa12.46□□□□□ -0.41
HMGCL-209ENST00000513148 RAB31Q13636 194 aa12.46□□□□□ -0.41
HMGCL-209ENST00000513148 IBA57Q5T440 356 aaKnown RBP12.46□□□□□ -0.41
HMGCL-209ENST00000513148 SCRT2Q9NQ03 307 aa12.46□□□□□ -0.41
HMGCL-209ENST00000513148 IGHV3OR16-13A0A075B7E8 117 aa12.45□□□□□ -0.42
HMGCL-209ENST00000513148 IGHV3-74A0A0B4J1X5 117 aa12.45□□□□□ -0.42
HMGCL-209ENST00000513148 MUC21A0A0G2JKD1 596 aa12.45□□□□□ -0.42
HMGCL-209ENST00000513148 MUC21A0A140T8X8 626 aa12.45□□□□□ -0.42
HMGCL-209ENST00000513148 GAGE10A6NGK3 116 aa12.45□□□□□ -0.42
HMGCL-209ENST00000513148 IGLV1-51P01701 117 aa12.45□□□□□ -0.42
HMGCL-209ENST00000513148 MUC21Q5SSG8 566 aa12.45□□□□□ -0.42
HMGCL-209ENST00000513148 NEGR1Q7Z3B1 354 aa12.45□□□□□ -0.42
HMGCL-209ENST00000513148 TECRQ9NZ01 308 aaKnown RBP12.45□□□□□ -0.42
HMGCL-209ENST00000513148 SMPXQ9UHP9 88 aa12.45□□□□□ -0.42
HMGCL-209ENST00000513148 IL4P05112 153 aa12.45□□□□□ -0.42
HMGCL-209ENST00000513148 EGFEM1PQ0D2K5 195 aa12.45□□□□□ -0.42
HMGCL-209ENST00000513148 SLAQ13239 276 aa12.45□□□□□ -0.42
HMGCL-209ENST00000513148 KPRPQ5T749 579 aaPredicted RBP12.45□□□□□ -0.42
HMGCL-209ENST00000513148 PQLC2Q6ZP29 291 aa12.45□□□□□ -0.42
HMGCL-209ENST00000513148 THAP8Q8NA92 274 aa12.45□□□□□ -0.42
HMGCL-209ENST00000513148 SIGLEC8Q9NYZ4 499 aa12.45□□□□□ -0.42
HMGCL-209ENST00000513148 TRAV8-6A0A0B4J262 113 aa12.44□□□□□ -0.42
HMGCL-209ENST00000513148 SYS1-DBNDD2H3BUS1 97 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms