RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 OR5AC2Q9NZP5 309 aa7.92□□□□□ -1.14
HMGCS1-204ENST00000507293 E5RGE8 158 aa7.91□□□□□ -1.14
HMGCS1-204ENST00000507293 NXPH4O95158 308 aa7.91□□□□□ -1.14
HMGCS1-204ENST00000507293 ZNF415Q09FC8 603 aa7.91□□□□□ -1.14
HMGCS1-204ENST00000507293 Q6ZRN7 208 aaPredicted RBP7.91□□□□□ -1.14
HMGCS1-204ENST00000507293 Q8N1X5 172 aa7.91□□□□□ -1.14
HMGCS1-204ENST00000507293 WDR61Q9GZS3 305 aaKnown RBP7.91□□□□□ -1.14
HMGCS1-204ENST00000507293 KCNIP2Q9NS61 270 aa7.91□□□□□ -1.14
HMGCS1-204ENST00000507293 APOBP04114 4563 aaKnown RBP7.91□□□□□ -1.14
HMGCS1-204ENST00000507293 PTTG1O95997 202 aa7.9□□□□□ -1.14
HMGCS1-204ENST00000507293 ZNF138P52744 262 aa7.9□□□□□ -1.14
HMGCS1-204ENST00000507293 CRYBA4P53673 196 aa7.9□□□□□ -1.14
HMGCS1-204ENST00000507293 MUC21Q5SSG8 566 aa7.9□□□□□ -1.14
HMGCS1-204ENST00000507293 C8orf49Q96NF6 230 aa7.9□□□□□ -1.14
HMGCS1-204ENST00000507293 SCRT2Q9NQ03 307 aa7.9□□□□□ -1.14
HMGCS1-204ENST00000507293 PRO0255Q9UI72 69 aa7.9□□□□□ -1.14
HMGCS1-204ENST00000507293 TRBV7-9A0A0J9YWB2 115 aa7.89□□□□□ -1.15
HMGCS1-204ENST00000507293 H0YIZ8 118 aa7.89□□□□□ -1.15
HMGCS1-204ENST00000507293 OR7C2O60412 319 aa7.89□□□□□ -1.15
HMGCS1-204ENST00000507293 UBE2L3P68036 154 aaKnown RBP7.89□□□□□ -1.15
HMGCS1-204ENST00000507293 FHL2Q14192 279 aa7.89□□□□□ -1.15
HMGCS1-204ENST00000507293 NMES1Q9C002 83 aa7.89□□□□□ -1.15
HMGCS1-204ENST00000507293 C17orf112F2Z3M2 114 aa7.88□□□□□ -1.15
HMGCS1-204ENST00000507293 CSN1S1P47710 185 aa7.88□□□□□ -1.15
HMGCS1-204ENST00000507293 RANP62826 216 aaKnown RBP7.88□□□□□ -1.15
HMGCS1-204ENST00000507293 SLAQ13239 276 aa7.88□□□□□ -1.15
HMGCS1-204ENST00000507293 ZNF266Q14584 549 aa7.88□□□□□ -1.15
HMGCS1-204ENST00000507293 MRPL23Q16540 153 aaKnown RBP7.88□□□□□ -1.15
HMGCS1-204ENST00000507293 LYPD5Q6UWN5 251 aa7.88□□□□□ -1.15
HMGCS1-204ENST00000507293 HHLA3Q9XRX5 114 aa7.88□□□□□ -1.15
HMGCS1-204ENST00000507293 TNFRSF18Q9Y5U5 241 aa7.88□□□□□ -1.15
HMGCS1-204ENST00000507293 TRGV4A0A0C4DH28 118 aa7.87□□□□□ -1.15
HMGCS1-204ENST00000507293 RBAKDNA6NC62 111 aa7.87□□□□□ -1.15
HMGCS1-204ENST00000507293 SSNA1O43805 119 aa7.87□□□□□ -1.15
HMGCS1-204ENST00000507293 SFTA3P0C7M3 94 aa7.87□□□□□ -1.15
HMGCS1-204ENST00000507293 FUSP35637 526 aaKnown RBP eCLIP7.87□□□□□ -1.15
HMGCS1-204ENST00000507293 CYCSP99999 105 aaKnown RBP7.87□□□□□ -1.15
HMGCS1-204ENST00000507293 FFAR4Q5NUL3 377 aa7.87□□□□□ -1.15
HMGCS1-204ENST00000507293 NEGR1Q7Z3B1 354 aa7.87□□□□□ -1.15
HMGCS1-204ENST00000507293 ATP5SQ99766 215 aa7.87□□□□□ -1.15
HMGCS1-204ENST00000507293 MDFICQ9P1T7 246 aa7.87□□□□□ -1.15
HMGCS1-204ENST00000507293 DIRC3C9JPN6 131 aa7.86□□□□□ -1.15
HMGCS1-204ENST00000507293 EIF3GO75821 320 aaKnown RBP eCLIP7.86□□□□□ -1.15
HMGCS1-204ENST00000507293 SRIP30626 198 aa7.86□□□□□ -1.15
HMGCS1-204ENST00000507293 H2BFSP57053 126 aa7.86□□□□□ -1.15
HMGCS1-204ENST00000507293 ERVFC1-1P60608 527 aa7.86□□□□□ -1.15
HMGCS1-204ENST00000507293 TMEM183BQ1AE95 376 aa7.86□□□□□ -1.15
HMGCS1-204ENST00000507293 RGS21Q2M5E4 152 aa7.86□□□□□ -1.15
HMGCS1-204ENST00000507293 KHDC3LQ587J8 217 aa7.86□□□□□ -1.15
HMGCS1-204ENST00000507293 Q6AWC8 147 aa7.86□□□□□ -1.15
HMGCS1-204ENST00000507293 TMEM183AQ8IXX5 376 aa7.86□□□□□ -1.15
HMGCS1-204ENST00000507293 LYPD1Q8N2G4 141 aa7.86□□□□□ -1.15
HMGCS1-204ENST00000507293 PPP1R1CQ8WVI7 109 aa7.86□□□□□ -1.15
HMGCS1-204ENST00000507293 ZNF479Q96JC4 524 aa7.86□□□□□ -1.15
HMGCS1-204ENST00000507293 NAGKQ9UJ70 344 aa7.86□□□□□ -1.15
HMGCS1-204ENST00000507293 HSPB11Q9Y547 144 aa7.86□□□□□ -1.15
HMGCS1-204ENST00000507293 DNAH5Q8TE73 4624 aa7.86□□□□□ -1.15
HMGCS1-204ENST00000507293 TRGV11A0A075B6L2 103 aa7.85□□□□□ -1.15
HMGCS1-204ENST00000507293 K7EQD1 137 aa7.85□□□□□ -1.15
HMGCS1-204ENST00000507293 EREGO14944 169 aa7.85□□□□□ -1.15
HMGCS1-204ENST00000507293 DNAH10OSP0CZ25 163 aa7.85□□□□□ -1.15
HMGCS1-204ENST00000507293 TAS2R45P59539 299 aa7.85□□□□□ -1.15
HMGCS1-204ENST00000507293 FAM159AQ6UWV7 190 aa7.85□□□□□ -1.15
HMGCS1-204ENST00000507293 WFDC10BQ8IUB3 73 aa7.85□□□□□ -1.15
HMGCS1-204ENST00000507293 OR10G4Q8NGN3 311 aa7.85□□□□□ -1.15
HMGCS1-204ENST00000507293 PCNPQ8WW12 178 aaKnown RBP7.85□□□□□ -1.15
HMGCS1-204ENST00000507293 SPXQ9BT56 116 aa7.85□□□□□ -1.15
HMGCS1-204ENST00000507293 SMIM3Q9BZL3 60 aa7.85□□□□□ -1.15
HMGCS1-204ENST00000507293 PGPEP1Q9NXJ5 209 aa7.85□□□□□ -1.15
HMGCS1-204ENST00000507293 RPH3ALQ9UNE2 315 aa7.85□□□□□ -1.15
HMGCS1-204ENST00000507293 LY96Q9Y6Y9 160 aa7.85□□□□□ -1.15
HMGCS1-204ENST00000507293 GYPEP15421 78 aa7.84□□□□□ -1.15
HMGCS1-204ENST00000507293 NFE4Q86UQ8 179 aa7.84□□□□□ -1.15
HMGCS1-204ENST00000507293 IQCF2Q8IXL9 164 aa7.84□□□□□ -1.15
HMGCS1-204ENST00000507293 SCGB1C1Q8TD33 95 aa7.84□□□□□ -1.15
HMGCS1-204ENST00000507293 RASL10AQ92737 203 aa7.84□□□□□ -1.15
HMGCS1-204ENST00000507293 HYLS1Q96M11 299 aa7.84□□□□□ -1.15
HMGCS1-204ENST00000507293 OTORQ9NRC9 128 aa7.84□□□□□ -1.15
HMGCS1-204ENST00000507293 LENEPQ9Y5L5 61 aa7.84□□□□□ -1.15
HMGCS1-204ENST00000507293 ALG5Q9Y673 324 aa7.84□□□□□ -1.15
HMGCS1-204ENST00000507293 TRAV9-2A0A087WT02 112 aa7.83□□□□□ -1.16
HMGCS1-204ENST00000507293 TRAV4A0A0B4J268 109 aa7.83□□□□□ -1.16
HMGCS1-204ENST00000507293 F6UZH7 168 aa7.83□□□□□ -1.16
HMGCS1-204ENST00000507293 MPC2O95563 127 aa7.83□□□□□ -1.16
HMGCS1-204ENST00000507293 IFNA5P01569 189 aa7.83□□□□□ -1.16
HMGCS1-204ENST00000507293 ORM1P02763 201 aa7.83□□□□□ -1.16
HMGCS1-204ENST00000507293 PET100P0DJ07 73 aa7.83□□□□□ -1.16
HMGCS1-204ENST00000507293 CDPF1Q6NVV7 123 aa7.83□□□□□ -1.16
HMGCS1-204ENST00000507293 CMTM2Q8TAZ6 248 aa7.83□□□□□ -1.16
HMGCS1-204ENST00000507293 TMED6Q8WW62 240 aa7.83□□□□□ -1.16
HMGCS1-204ENST00000507293 MSRB1Q9NZV6 116 aa7.83□□□□□ -1.16
HMGCS1-204ENST00000507293 A0A087WTM6 91 aa7.82□□□□□ -1.16
HMGCS1-204ENST00000507293 PGPA6NDG6 321 aa7.82□□□□□ -1.16
HMGCS1-204ENST00000507293 EPM2AB3EWF7 344 aa7.82□□□□□ -1.16
HMGCS1-204ENST00000507293 RPL12P30050 165 aaKnown RBP7.82□□□□□ -1.16
HMGCS1-204ENST00000507293 TDRG1Q3Y452 100 aa7.82□□□□□ -1.16
HMGCS1-204ENST00000507293 GOLT1AQ6ZVE7 132 aa7.82□□□□□ -1.16
HMGCS1-204ENST00000507293 MED28Q9H204 178 aa7.82□□□□□ -1.16
HMGCS1-204ENST00000507293 MBD2Q9UBB5 411 aa7.82□□□□□ -1.16
HMGCS1-204ENST00000507293 TRAV21A0A0B4J279 112 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms