RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 FAM210BQ96KR6 192 aa6.14□□□□□ -1.43
PDGFC-205ENST00000506880 C18orf15Q96N68 181 aa6.14□□□□□ -1.43
PDGFC-205ENST00000506880 TMEM208Q9BTX3 173 aa6.14□□□□□ -1.43
PDGFC-205ENST00000506880 SLC35B3Q9H1N7 401 aa6.14□□□□□ -1.43
PDGFC-205ENST00000506880 EDA2RQ9HAV5 297 aa6.14□□□□□ -1.43
PDGFC-205ENST00000506880 TREM1Q9NP99 234 aa6.14□□□□□ -1.43
PDGFC-205ENST00000506880 SELENOKQ9Y6D0 94 aa6.14□□□□□ -1.43
PDGFC-205ENST00000506880 DNAH9Q9NYC9 4486 aa6.14□□□□□ -1.43
PDGFC-205ENST00000506880 PRAC2D3DTV9 90 aa6.13□□□□□ -1.43
PDGFC-205ENST00000506880 PAGE4O60829 102 aa6.13□□□□□ -1.43
PDGFC-205ENST00000506880 ZNF324O75467 553 aaPredicted RBP6.13□□□□□ -1.43
PDGFC-205ENST00000506880 LTAP01374 205 aa6.13□□□□□ -1.43
PDGFC-205ENST00000506880 PFN1P07737 140 aaKnown RBP6.13□□□□□ -1.43
PDGFC-205ENST00000506880 HLA-DMBP28068 263 aa6.13□□□□□ -1.43
PDGFC-205ENST00000506880 AKR1C3P42330 323 aa6.13□□□□□ -1.43
PDGFC-205ENST00000506880 FGF8P55075 233 aaPredicted RBP6.13□□□□□ -1.43
PDGFC-205ENST00000506880 RAB14P61106 215 aa6.13□□□□□ -1.43
PDGFC-205ENST00000506880 DAZ2Q13117 558 aaKnown RBP6.13□□□□□ -1.43
PDGFC-205ENST00000506880 SPINK13Q1W4C9 94 aa6.13□□□□□ -1.43
PDGFC-205ENST00000506880 LGALS9BQ3B8N2 356 aa6.13□□□□□ -1.43
PDGFC-205ENST00000506880 GFI1BQ5VTD9 330 aa6.13□□□□□ -1.43
PDGFC-205ENST00000506880 IGFL4Q6B9Z1 124 aa6.13□□□□□ -1.43
PDGFC-205ENST00000506880 ALKAL2Q6UX46 152 aa6.13□□□□□ -1.43
PDGFC-205ENST00000506880 EIF4E3Q8N5X7 224 aaKnown RBP6.13□□□□□ -1.43
PDGFC-205ENST00000506880 C2CD4CQ8TF44 421 aa6.13□□□□□ -1.43
PDGFC-205ENST00000506880 PTH2Q96A98 100 aa6.13□□□□□ -1.43
PDGFC-205ENST00000506880 VGLL1Q99990 258 aa6.13□□□□□ -1.43
PDGFC-205ENST00000506880 PSG8Q9UQ74 426 aa6.13□□□□□ -1.43
PDGFC-205ENST00000506880 YTHDF2Q9Y5A9 579 aaKnown RBP6.13□□□□□ -1.43
PDGFC-205ENST00000506880 LY96Q9Y6Y9 160 aa6.13□□□□□ -1.43
PDGFC-205ENST00000506880 X6R8D5 127 aa6.13□□□□□ -1.43
PDGFC-205ENST00000506880 TRGV11A0A075B6L2 103 aa6.12□□□□□ -1.43
PDGFC-205ENST00000506880 IGKV2-40A0A087WW87 121 aaPredicted RBP6.12□□□□□ -1.43
PDGFC-205ENST00000506880 FABP5P3A8MUU1 101 aa6.12□□□□□ -1.43
PDGFC-205ENST00000506880 H3BTX0 84 aa6.12□□□□□ -1.43
PDGFC-205ENST00000506880 M0R2Z0 102 aa6.12□□□□□ -1.43
PDGFC-205ENST00000506880 IGKV2D-40P01614 121 aaPredicted RBP6.12□□□□□ -1.43
PDGFC-205ENST00000506880 IGLV2-11P01706 119 aa6.12□□□□□ -1.43
PDGFC-205ENST00000506880 SPART-AS1P0CW21 52 aa6.12□□□□□ -1.43
PDGFC-205ENST00000506880 CCL20P78556 96 aa6.12□□□□□ -1.43
PDGFC-205ENST00000506880 FAM74A3Q4VXF1 159 aa6.12□□□□□ -1.43
PDGFC-205ENST00000506880 ZNF506Q5JVG8 444 aa6.12□□□□□ -1.43
PDGFC-205ENST00000506880 DNLZQ5SXM8 178 aa6.12□□□□□ -1.43
PDGFC-205ENST00000506880 TMEM183AQ8IXX5 376 aa6.12□□□□□ -1.43
PDGFC-205ENST00000506880 C1orf158Q8N1D5 194 aa6.12□□□□□ -1.43
PDGFC-205ENST00000506880 LINC01587Q99440 93 aa6.12□□□□□ -1.43
PDGFC-205ENST00000506880 SPXQ9BT56 116 aa6.12□□□□□ -1.43
PDGFC-205ENST00000506880 GNG13Q9P2W3 67 aa6.12□□□□□ -1.43
PDGFC-205ENST00000506880 TIMM8BQ9Y5J9 83 aaPredicted RBP6.12□□□□□ -1.43
PDGFC-205ENST00000506880 NUPR2A6NF83 97 aa6.11□□□□□ -1.43
PDGFC-205ENST00000506880 C9JCJ5 164 aa6.11□□□□□ -1.43
PDGFC-205ENST00000506880 IGKV3-20P01619 116 aa6.11□□□□□ -1.43
PDGFC-205ENST00000506880 NKX2-5P52952 324 aaPredicted RBP6.11□□□□□ -1.43
PDGFC-205ENST00000506880 FAM159AQ6UWV7 190 aa6.11□□□□□ -1.43
PDGFC-205ENST00000506880 Q86TA4 180 aa6.11□□□□□ -1.43
PDGFC-205ENST00000506880 RNASE8Q8TDE3 154 aaKnown RBP6.11□□□□□ -1.43
PDGFC-205ENST00000506880 FAM210AQ96ND0 272 aa6.11□□□□□ -1.43
PDGFC-205ENST00000506880 MUC4Q99102 2169 aa6.1□□□□□ -1.43
PDGFC-205ENST00000506880 IGHV1OR15-1A0A075B7D0 117 aa6.1□□□□□ -1.43
PDGFC-205ENST00000506880 IGHV4-28A0A0C4DH34 117 aa6.1□□□□□ -1.43
PDGFC-205ENST00000506880 LOC102723971A0A1B0GUV8 181 aa6.1□□□□□ -1.43
PDGFC-205ENST00000506880 RAB19A4D1S5 217 aa6.1□□□□□ -1.43
PDGFC-205ENST00000506880 RBFOX3A6NFN3 312 aa6.1□□□□□ -1.43
PDGFC-205ENST00000506880 SNURFLB1AK76 121 aa6.1□□□□□ -1.43
PDGFC-205ENST00000506880 RGS13O14921 159 aa6.1□□□□□ -1.43
PDGFC-205ENST00000506880 MED14OSP0DP75 135 aa6.1□□□□□ -1.43
PDGFC-205ENST00000506880 UBE2G2P60604 165 aa6.1□□□□□ -1.43
PDGFC-205ENST00000506880 ERCC8Q13216 396 aa6.1□□□□□ -1.43
PDGFC-205ENST00000506880 PEA15Q15121 130 aa6.1□□□□□ -1.43
PDGFC-205ENST00000506880 ZNF674Q2M3X9 581 aa6.1□□□□□ -1.43
PDGFC-205ENST00000506880 FAM162BQ5T6X4 162 aa6.1□□□□□ -1.43
PDGFC-205ENST00000506880 C11orf45Q8TAV5 145 aa6.1□□□□□ -1.43
PDGFC-205ENST00000506880 MUC7Q8TAX7 377 aa6.1□□□□□ -1.43
PDGFC-205ENST00000506880 MLST8Q9BVC4 326 aa6.1□□□□□ -1.43
PDGFC-205ENST00000506880 SDF2L1Q9HCN8 221 aa6.1□□□□□ -1.43
PDGFC-205ENST00000506880 MED9Q9NWA0 146 aa6.1□□□□□ -1.43
PDGFC-205ENST00000506880 XKRY2A2RUG3 117 aa6.09□□□□□ -1.43
PDGFC-205ENST00000506880 CXorf65A6NEN9 183 aa6.09□□□□□ -1.43
PDGFC-205ENST00000506880 SNRPCP09234 159 aaKnown RBP6.09□□□□□ -1.43
PDGFC-205ENST00000506880 RNASE4P34096 147 aaKnown RBP6.09□□□□□ -1.43
PDGFC-205ENST00000506880 TCL1AP56279 114 aa6.09□□□□□ -1.43
PDGFC-205ENST00000506880 ZNF415Q09FC8 603 aa6.09□□□□□ -1.43
PDGFC-205ENST00000506880 SLAQ13239 276 aa6.09□□□□□ -1.43
PDGFC-205ENST00000506880 CLLU1Q5K131 121 aa6.09□□□□□ -1.43
PDGFC-205ENST00000506880 BAGE2Q86Y30 109 aa6.09□□□□□ -1.43
PDGFC-205ENST00000506880 LINC00612Q8N6U2 182 aa6.09□□□□□ -1.43
PDGFC-205ENST00000506880 DKK2Q9UBU2 259 aa6.09□□□□□ -1.43
PDGFC-205ENST00000506880 KLK5Q9Y337 293 aaPredicted RBP6.09□□□□□ -1.43
PDGFC-205ENST00000506880 HUWE1Q7Z6Z7 4374 aaKnown RBP6.09□□□□□ -1.43
PDGFC-205ENST00000506880 TRAV12-3A0A0B4J271 114 aa6.08□□□□□ -1.44
PDGFC-205ENST00000506880 A0A0J9YWU9 116 aa6.08□□□□□ -1.44
PDGFC-205ENST00000506880 H3BNG1 76 aa6.08□□□□□ -1.44
PDGFC-205ENST00000506880 RPL35P42766 123 aaKnown RBP6.08□□□□□ -1.44
PDGFC-205ENST00000506880 ATP5G3P48201 142 aa6.08□□□□□ -1.44
PDGFC-205ENST00000506880 GNG4P50150 75 aa6.08□□□□□ -1.44
PDGFC-205ENST00000506880 DEFB1P60022 68 aa6.08□□□□□ -1.44
PDGFC-205ENST00000506880 RPS20P60866 119 aaKnown RBP6.08□□□□□ -1.44
PDGFC-205ENST00000506880 GNG5P63218 68 aa6.08□□□□□ -1.44
PDGFC-205ENST00000506880 LINC01559Q495D7 138 aa6.08□□□□□ -1.44
PDGFC-205ENST00000506880 XP32Q5T750 250 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms