RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 GAGE12BA1L429 117 aa7.5□□□□□ -1.21
PHF3-208ENST00000506783 LTAP01374 205 aa7.5□□□□□ -1.21
PHF3-208ENST00000506783 HOXB4P17483 251 aaPredicted RBP7.5□□□□□ -1.21
PHF3-208ENST00000506783 ADORA2A-AS1P86434 159 aa7.5□□□□□ -1.21
PHF3-208ENST00000506783 HIST2H2BCQ6DN03 193 aa7.5□□□□□ -1.21
PHF3-208ENST00000506783 ZNF256Q9Y2P7 627 aaPredicted RBP7.5□□□□□ -1.21
PHF3-208ENST00000506783 LY96Q9Y6Y9 160 aa7.5□□□□□ -1.21
PHF3-208ENST00000506783 TRAV9-1A0A075B6T8 112 aa7.5□□□□□ -1.21
PHF3-208ENST00000506783 IGKV3D-20A0A0C4DH25 116 aa7.5□□□□□ -1.21
PHF3-208ENST00000506783 CR1LQ2VPA4 569 aa7.5□□□□□ -1.21
PHF3-208ENST00000506783 SIGLEC15Q6ZMC9 328 aa7.5□□□□□ -1.21
PHF3-208ENST00000506783 APOMO95445 188 aa7.49□□□□□ -1.21
PHF3-208ENST00000506783 IGLV1-47P01700 117 aa7.49□□□□□ -1.21
PHF3-208ENST00000506783 TRBV12-3P01733 135 aa7.49□□□□□ -1.21
PHF3-208ENST00000506783 DLX6P56179 175 aa7.49□□□□□ -1.21
PHF3-208ENST00000506783 TMEM97Q5BJF2 176 aa7.49□□□□□ -1.21
PHF3-208ENST00000506783 C12orf54Q6X4T0 127 aa7.49□□□□□ -1.21
PHF3-208ENST00000506783 TNRC6BQ9UPQ9 1833 aaKnown RBP7.49□□□□□ -1.21
PHF3-208ENST00000506783 BVES-AS1Q5T3Y7 98 aa7.49□□□□□ -1.21
PHF3-208ENST00000506783 HIST1H4GQ99525 98 aa7.49□□□□□ -1.21
PHF3-208ENST00000506783 MAP1LC3AQ9H492 121 aa7.49□□□□□ -1.21
PHF3-208ENST00000506783 PHLDA3Q9Y5J5 127 aa7.49□□□□□ -1.21
PHF3-208ENST00000506783 TRAV12-2A0A075B6T6 113 aa7.48□□□□□ -1.21
PHF3-208ENST00000506783 A0A0U1RRA0 63 aa7.48□□□□□ -1.21
PHF3-208ENST00000506783 CTRLP40313 264 aa7.48□□□□□ -1.21
PHF3-208ENST00000506783 SRSF9Q13242 221 aaKnown RBP eCLIP7.48□□□□□ -1.21
PHF3-208ENST00000506783 PRR25Q96S07 402 aa7.48□□□□□ -1.21
PHF3-208ENST00000506783 CCL19Q99731 98 aa7.48□□□□□ -1.21
PHF3-208ENST00000506783 BEX4Q9NWD9 120 aaPredicted RBP7.48□□□□□ -1.21
PHF3-208ENST00000506783 MRPL27Q9P0M9 148 aaKnown RBP7.48□□□□□ -1.21
PHF3-208ENST00000506783 ITPR3Q14573 2671 aa7.48□□□□□ -1.21
PHF3-208ENST00000506783 CD300EQ496F6 205 aaPredicted RBP7.48□□□□□ -1.21
PHF3-208ENST00000506783 CLEC2AQ6UVW9 174 aa7.48□□□□□ -1.21
PHF3-208ENST00000506783 CYSLTR1Q9Y271 337 aa7.48□□□□□ -1.21
PHF3-208ENST00000506783 MUC4Q99102 2169 aa7.48□□□□□ -1.21
PHF3-208ENST00000506783 NPC2P61916 151 aa7.48□□□□□ -1.21
PHF3-208ENST00000506783 THAP8Q8NA92 274 aa7.48□□□□□ -1.21
PHF3-208ENST00000506783 CFHR4Q92496 578 aa7.48□□□□□ -1.21
PHF3-208ENST00000506783 ZNF747Q9BV97 191 aa7.48□□□□□ -1.21
PHF3-208ENST00000506783 FABP5P3A8MUU1 101 aa7.47□□□□□ -1.21
PHF3-208ENST00000506783 SCGB2A1O75556 95 aa7.47□□□□□ -1.21
PHF3-208ENST00000506783 PRM2P04554 102 aa7.47□□□□□ -1.21
PHF3-208ENST00000506783 BLCAPP62952 87 aa7.47□□□□□ -1.21
PHF3-208ENST00000506783 MYOZ3Q8TDC0 251 aa7.47□□□□□ -1.21
PHF3-208ENST00000506783 FANCD2OSQ96PS1 177 aa7.47□□□□□ -1.21
PHF3-208ENST00000506783 DUX3Q96PT4 197 aa7.47□□□□□ -1.21
PHF3-208ENST00000506783 METTL26Q96S19 204 aa7.47□□□□□ -1.21
PHF3-208ENST00000506783 SPCS1Q9Y6A9 102 aa7.47□□□□□ -1.21
PHF3-208ENST00000506783 A0A1W2PPR1 153 aa7.47□□□□□ -1.21
PHF3-208ENST00000506783 HBDP02042 147 aa7.47□□□□□ -1.21
PHF3-208ENST00000506783 ZNF418Q8TF45 676 aaPredicted RBP7.47□□□□□ -1.21
PHF3-208ENST00000506783 FNDC10F2Z333 226 aa7.47□□□□□ -1.21
PHF3-208ENST00000506783 ITGB1BP1O14713 200 aa7.47□□□□□ -1.21
PHF3-208ENST00000506783 GNRH2O43555 120 aa7.47□□□□□ -1.21
PHF3-208ENST00000506783 CTSGP08311 255 aa7.47□□□□□ -1.21
PHF3-208ENST00000506783 ZNF688P0C7X2 276 aa7.47□□□□□ -1.21
PHF3-208ENST00000506783 PLP1P60201 277 aa7.47□□□□□ -1.21
PHF3-208ENST00000506783 MLST8Q9BVC4 326 aa7.47□□□□□ -1.21
PHF3-208ENST00000506783 JPT2Q9H910 190 aa7.47□□□□□ -1.21
PHF3-208ENST00000506783 TNFRSF6BO95407 300 aa7.46□□□□□ -1.22
PHF3-208ENST00000506783 EDN2P20800 178 aa7.46□□□□□ -1.22
PHF3-208ENST00000506783 FAM104BQ5XKR9 115 aa7.46□□□□□ -1.22
PHF3-208ENST00000506783 CST9LQ9H4G1 147 aa7.46□□□□□ -1.22
PHF3-208ENST00000506783 C7orf69Q9H7B7 122 aa7.46□□□□□ -1.22
PHF3-208ENST00000506783 TMEM8BA6NDV4 472 aa7.45□□□□□ -1.22
PHF3-208ENST00000506783 KNCNA6PVL3 124 aa7.45□□□□□ -1.22
PHF3-208ENST00000506783 H3BUX3 64 aa7.45□□□□□ -1.22
PHF3-208ENST00000506783 C19orf84I3L1E1 186 aa7.45□□□□□ -1.22
PHF3-208ENST00000506783 TAX1BP3O14907 124 aa7.45□□□□□ -1.22
PHF3-208ENST00000506783 IGLV2-11P01706 119 aa7.45□□□□□ -1.22
PHF3-208ENST00000506783 BMI1P35226 326 aa7.45□□□□□ -1.22
PHF3-208ENST00000506783 RNASE13Q5GAN3 156 aaKnown RBP7.45□□□□□ -1.22
PHF3-208ENST00000506783 FAM231DQ6ZW35 169 aa7.45□□□□□ -1.22
PHF3-208ENST00000506783 AGPAT4-IT1Q9H0P7 198 aa7.45□□□□□ -1.22
PHF3-208ENST00000506783 MXRA5Q9NR99 2828 aa7.45□□□□□ -1.22
PHF3-208ENST00000506783 SMIM17P0DL12 118 aa7.45□□□□□ -1.22
PHF3-208ENST00000506783 MRGPRG-AS1Q2M3A8 158 aa7.45□□□□□ -1.22
PHF3-208ENST00000506783 ATP5L2Q7Z4Y8 100 aa7.45□□□□□ -1.22
PHF3-208ENST00000506783 DTX2Q86UW9 622 aa7.45□□□□□ -1.22
PHF3-208ENST00000506783 MRPL35Q9NZE8 188 aaKnown RBP7.45□□□□□ -1.22
PHF3-208ENST00000506783 IGKV2D-26A0A0A0MRZ7 120 aa7.45□□□□□ -1.22
PHF3-208ENST00000506783 TRAV12-3A0A0B4J271 114 aa7.45□□□□□ -1.22
PHF3-208ENST00000506783 A0A0G2JLM5 398 aa7.45□□□□□ -1.22
PHF3-208ENST00000506783 C19orf71A6NCJ1 209 aa7.45□□□□□ -1.22
PHF3-208ENST00000506783 OVOL3O00110 214 aa7.45□□□□□ -1.22
PHF3-208ENST00000506783 CCDC144NLQ6NUI1 221 aa7.45□□□□□ -1.22
PHF3-208ENST00000506783 ZNF562Q6V9R5 426 aa7.45□□□□□ -1.22
PHF3-208ENST00000506783 RPL39LQ96EH5 51 aaKnown RBP7.45□□□□□ -1.22
PHF3-208ENST00000506783 PRORYQ9H606 182 aa7.45□□□□□ -1.22
PHF3-208ENST00000506783 NBEAL1Q6ZS30 2694 aa7.45□□□□□ -1.22
PHF3-208ENST00000506783 UBR5O95071 2799 aaPredicted RBP7.45□□□□□ -1.22
PHF3-208ENST00000506783 IGHV7-81A0A0B4J1V7 117 aa7.44□□□□□ -1.22
PHF3-208ENST00000506783 H3BRN7 92 aa7.44□□□□□ -1.22
PHF3-208ENST00000506783 SCGB1C2P0DMR2 95 aa7.44□□□□□ -1.22
PHF3-208ENST00000506783 ATP5IP56385 69 aaPredicted RBP7.44□□□□□ -1.22
PHF3-208ENST00000506783 ATP5G2Q06055 141 aa7.44□□□□□ -1.22
PHF3-208ENST00000506783 TMEM170BQ5T4T1 132 aa7.44□□□□□ -1.22
PHF3-208ENST00000506783 UNQ9165/PRO28630Q6UXU0 137 aa7.44□□□□□ -1.22
PHF3-208ENST00000506783 GTSF1LQ9H1H1 148 aa7.44□□□□□ -1.22
PHF3-208ENST00000506783 ST20Q9HBF5 79 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms