RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 EPG5Q9HCE0 2579 aa0.49□□□□□ -2.33
GYPB-207ENST00000506679 XIRP1Q702N8 1843 aaKnown RBP0.48□□□□□ -2.33
GYPB-207ENST00000506679 TRAV23DV6A0A075B6W5 121 aa0.48□□□□□ -2.33
GYPB-207ENST00000506679 C3orf85A0A1B0GTC6 90 aa0.48□□□□□ -2.33
GYPB-207ENST00000506679 A6NN06 94 aa0.48□□□□□ -2.33
GYPB-207ENST00000506679 RPL7P18124 248 aaKnown RBP0.48□□□□□ -2.33
GYPB-207ENST00000506679 RPL22P35268 128 aaKnown RBP0.48□□□□□ -2.33
GYPB-207ENST00000506679 ETV6P41212 452 aa0.48□□□□□ -2.33
GYPB-207ENST00000506679 DNAJB13P59910 316 aa0.48□□□□□ -2.33
GYPB-207ENST00000506679 ASB16-AS1Q495Z4 193 aa0.48□□□□□ -2.33
GYPB-207ENST00000506679 HRCT1Q6UXD1 115 aa0.48□□□□□ -2.33
GYPB-207ENST00000506679 IZUMO2Q6UXV1 221 aa0.48□□□□□ -2.33
GYPB-207ENST00000506679 TAC4Q86UU9 113 aa0.48□□□□□ -2.33
GYPB-207ENST00000506679 C5orf17Q8NAS9 161 aa0.48□□□□□ -2.33
GYPB-207ENST00000506679 OR5A2Q8NGI9 324 aa0.48□□□□□ -2.33
GYPB-207ENST00000506679 CLEC2BQ92478 149 aa0.48□□□□□ -2.33
GYPB-207ENST00000506679 AP1S3Q96PC3 154 aa0.48□□□□□ -2.33
GYPB-207ENST00000506679 TAF9BQ9HBM6 251 aa0.48□□□□□ -2.33
GYPB-207ENST00000506679 C19orf12Q9NSK7 152 aa0.48□□□□□ -2.33
GYPB-207ENST00000506679 TRAPPC2LQ9UL33 140 aa0.48□□□□□ -2.33
GYPB-207ENST00000506679 GINS2Q9Y248 185 aa0.48□□□□□ -2.33
GYPB-207ENST00000506679 NDUFAF1Q9Y375 327 aa0.48□□□□□ -2.33
GYPB-207ENST00000506679 MPC1Q9Y5U8 109 aa0.48□□□□□ -2.33
GYPB-207ENST00000506679 CITO14578 2027 aa0.48□□□□□ -2.33
GYPB-207ENST00000506679 SRCAPQ6ZRS2 3230 aa0.48□□□□□ -2.33
GYPB-207ENST00000506679 BSNQ9UPA5 3926 aa0.48□□□□□ -2.33
GYPB-207ENST00000506679 CNTRLQ7Z7A1 2325 aa0.48□□□□□ -2.33
GYPB-207ENST00000506679 MYH1P12882 1939 aa0.48□□□□□ -2.33
GYPB-207ENST00000506679 ZGRF1Q86YA3 2104 aa0.47□□□□□ -2.33
GYPB-207ENST00000506679 NAV2Q8IVL1 2488 aa0.47□□□□□ -2.33
GYPB-207ENST00000506679 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.47□□□□□ -2.33
GYPB-207ENST00000506679 ATG2AQ2TAZ0 1938 aa0.47□□□□□ -2.33
GYPB-207ENST00000506679 LOC107984640A0A0U1RRK4 108 aa0.47□□□□□ -2.33
GYPB-207ENST00000506679 IFITM5A6NNB3 132 aa0.47□□□□□ -2.33
GYPB-207ENST00000506679 BBIP1A8MTZ0 92 aa0.47□□□□□ -2.33
GYPB-207ENST00000506679 J3KT08 172 aa0.47□□□□□ -2.33
GYPB-207ENST00000506679 UQCRQO14949 82 aa0.47□□□□□ -2.33
GYPB-207ENST00000506679 SULT1C4O75897 302 aa0.47□□□□□ -2.33
GYPB-207ENST00000506679 IGHV3-30P01768 117 aa0.47□□□□□ -2.33
GYPB-207ENST00000506679 NBEAP1P0C6P0 100 aa0.47□□□□□ -2.33
GYPB-207ENST00000506679 IGHV3-30-5P0DP03 117 aa0.47□□□□□ -2.33
GYPB-207ENST00000506679 PDE6GP18545 87 aa0.47□□□□□ -2.33
GYPB-207ENST00000506679 CRYGSP22914 178 aa0.47□□□□□ -2.33
GYPB-207ENST00000506679 NEDD8Q15843 81 aa0.47□□□□□ -2.33
GYPB-207ENST00000506679 SBSPONQ8IVN8 264 aa0.47□□□□□ -2.33
GYPB-207ENST00000506679 C10orf111Q8N326 155 aa0.47□□□□□ -2.33
GYPB-207ENST00000506679 TEX29Q8N6K0 151 aa0.47□□□□□ -2.33
GYPB-207ENST00000506679 TMEM229BQ8NBD8 167 aa0.47□□□□□ -2.33
GYPB-207ENST00000506679 NAT14Q8WUY8 206 aa0.47□□□□□ -2.33
GYPB-207ENST00000506679 CBLN4Q9NTU7 201 aa0.47□□□□□ -2.33
GYPB-207ENST00000506679 WDFY4Q6ZS81 3184 aa0.47□□□□□ -2.33
GYPB-207ENST00000506679 PIEZO1Q92508 2521 aa0.47□□□□□ -2.33
GYPB-207ENST00000506679 ANK1P16157 1881 aa0.47□□□□□ -2.33
GYPB-207ENST00000506679 ABCA12Q86UK0 2595 aa0.47□□□□□ -2.33
GYPB-207ENST00000506679 FAM135BQ49AJ0 1406 aa0.47□□□□□ -2.33
GYPB-207ENST00000506679 ASCC3Q8N3C0 2202 aaKnown RBP0.46□□□□□ -2.34
GYPB-207ENST00000506679 TENM4Q6N022 2769 aa0.46□□□□□ -2.34
GYPB-207ENST00000506679 ZFHX4Q86UP3 3567 aa0.46□□□□□ -2.34
GYPB-207ENST00000506679 MED23Q9ULK4 1368 aa0.46□□□□□ -2.34
GYPB-207ENST00000506679 BORCS7-ASMTA0A0B4J1R7 106 aa0.46□□□□□ -2.34
GYPB-207ENST00000506679 PNMA8CA0A1B0GUJ8 204 aa0.46□□□□□ -2.34
GYPB-207ENST00000506679 A0A1B0GX51 115 aa0.46□□□□□ -2.34
GYPB-207ENST00000506679 DPM2O94777 84 aa0.46□□□□□ -2.34
GYPB-207ENST00000506679 GYPBP06028 91 aa0.46□□□□□ -2.34
GYPB-207ENST00000506679 CD14P08571 375 aa0.46□□□□□ -2.34
GYPB-207ENST00000506679 CCL4P13236 92 aa0.46□□□□□ -2.34
GYPB-207ENST00000506679 RPS3P23396 243 aaKnown RBP eCLIP0.46□□□□□ -2.341e-8■■■■■ 38.6
GYPB-207ENST00000506679 FOXA3P55318 350 aaPredicted RBP0.46□□□□□ -2.34
GYPB-207ENST00000506679 OCIAD2Q56VL3 154 aa0.46□□□□□ -2.34
GYPB-207ENST00000506679 ZCCHC23Q6ZST2 131 aa0.46□□□□□ -2.34
GYPB-207ENST00000506679 C3orf62Q6ZUJ4 267 aa0.46□□□□□ -2.34
GYPB-207ENST00000506679 OR8I2Q8N0Y5 310 aa0.46□□□□□ -2.34
GYPB-207ENST00000506679 ATOH7Q8N100 152 aa0.46□□□□□ -2.34
GYPB-207ENST00000506679 TCTEX1D1Q8N7M0 179 aa0.46□□□□□ -2.34
GYPB-207ENST00000506679 OR51A4Q8NGJ6 313 aa0.46□□□□□ -2.34
GYPB-207ENST00000506679 PYDC1Q8WXC3 89 aa0.46□□□□□ -2.34
GYPB-207ENST00000506679 MAGOHBQ96A72 148 aaKnown RBP0.46□□□□□ -2.34
GYPB-207ENST00000506679 NABP2Q9BQ15 211 aa0.46□□□□□ -2.34
GYPB-207ENST00000506679 MRPL40Q9NQ50 206 aaKnown RBP0.46□□□□□ -2.34
GYPB-207ENST00000506679 ARAP1Q96P48 1450 aa0.46□□□□□ -2.34
GYPB-207ENST00000506679 MED12Q93074 2177 aa0.46□□□□□ -2.34
GYPB-207ENST00000506679 TET1Q8NFU7 2136 aa0.46□□□□□ -2.34
GYPB-207ENST00000506679 MYO18BQ8IUG5 2567 aa0.46□□□□□ -2.34
GYPB-207ENST00000506679 NINQ8N4C6 2090 aa0.45□□□□□ -2.34
GYPB-207ENST00000506679 NSD1Q96L73 2696 aaPredicted RBP0.45□□□□□ -2.34
GYPB-207ENST00000506679 CREBBPQ92793 2442 aa0.45□□□□□ -2.34
GYPB-207ENST00000506679 MUC4Q99102 2169 aa0.45□□□□□ -2.34
GYPB-207ENST00000506679 TRAV36DV7A0A075B6V5 113 aa0.45□□□□□ -2.34
GYPB-207ENST00000506679 TRBV30A0A0K0K1B3 111 aa0.45□□□□□ -2.34
GYPB-207ENST00000506679 A0A1W2PPB8 328 aa0.45□□□□□ -2.34
GYPB-207ENST00000506679 A0A1W2PRS3 328 aa0.45□□□□□ -2.34
GYPB-207ENST00000506679 ZNF727A8MUV8 499 aa0.45□□□□□ -2.34
GYPB-207ENST00000506679 KIR3DP1A8MWS1 328 aa0.45□□□□□ -2.34
GYPB-207ENST00000506679 HBDP02042 147 aa0.45□□□□□ -2.34
GYPB-207ENST00000506679 SCTP09683 121 aa0.45□□□□□ -2.34
GYPB-207ENST00000506679 SLC25A4P12235 298 aa0.45□□□□□ -2.34
GYPB-207ENST00000506679 GTF2A1P52655 376 aaPredicted RBP0.45□□□□□ -2.34
GYPB-207ENST00000506679 FXYD6P3P58550 94 aa0.45□□□□□ -2.34
GYPB-207ENST00000506679 FXYD4P59646 89 aa0.45□□□□□ -2.34
GYPB-207ENST00000506679 BLCAPP62952 87 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms