RNA–Protein interactions for RNA: ENST00000506556.1

THUMPD3P1-201, Transcript of THUMP domain containing 3 pseudogene 1, humanhuman

BASIC

Gene THUMPD3P1, Length 1,480 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3P1-201ENST00000506556 IGHV1-69P01742 117 aa2.31□□□□□ -2.04
THUMPD3P1-201ENST00000506556 IGHV1-46P01743 117 aa2.31□□□□□ -2.04
THUMPD3P1-201ENST00000506556 IGHV3-7P01780 117 aa2.31□□□□□ -2.04
THUMPD3P1-201ENST00000506556 IGHV3-30-3P0DP02 117 aa2.31□□□□□ -2.04
THUMPD3P1-201ENST00000506556 UBA52P62987 128 aaKnown RBP2.31□□□□□ -2.04
THUMPD3P1-201ENST00000506556 DEFB116Q30KQ4 102 aa2.31□□□□□ -2.04
THUMPD3P1-201ENST00000506556 C10orf91Q5T1B1 145 aa2.31□□□□□ -2.04
THUMPD3P1-201ENST00000506556 AAED1Q7RTV5 226 aa2.31□□□□□ -2.04
THUMPD3P1-201ENST00000506556 SLC35E3Q7Z769 313 aa2.31□□□□□ -2.04
THUMPD3P1-201ENST00000506556 SVBPQ8N300 66 aa2.31□□□□□ -2.04
THUMPD3P1-201ENST00000506556 C3orf56Q8N813 242 aa2.31□□□□□ -2.04
THUMPD3P1-201ENST00000506556 MORN4Q8NDC4 146 aa2.31□□□□□ -2.04
THUMPD3P1-201ENST00000506556 PLPP5Q8NEB5 264 aa2.31□□□□□ -2.04
THUMPD3P1-201ENST00000506556 OR5D16Q8NGK9 328 aa2.31□□□□□ -2.04
THUMPD3P1-201ENST00000506556 LINC01560Q8TB33 94 aa2.31□□□□□ -2.04
THUMPD3P1-201ENST00000506556 UBE2WQ96B02 151 aa2.31□□□□□ -2.04
THUMPD3P1-201ENST00000506556 YPEL2Q96QA6 119 aa2.31□□□□□ -2.04
THUMPD3P1-201ENST00000506556 PKMYT1Q99640 499 aa2.31□□□□□ -2.04
THUMPD3P1-201ENST00000506556 LINC00574Q9H8X3 128 aa2.31□□□□□ -2.04
THUMPD3P1-201ENST00000506556 OR5V1Q9UGF6 321 aa2.31□□□□□ -2.04
THUMPD3P1-201ENST00000506556 ZNF443Q9Y2A4 671 aaPredicted RBP2.31□□□□□ -2.04
THUMPD3P1-201ENST00000506556 LSM2Q9Y333 95 aaKnown RBP2.31□□□□□ -2.04
THUMPD3P1-201ENST00000506556 HSPE1-MOB4S4R3N1 261 aa2.31□□□□□ -2.04
THUMPD3P1-201ENST00000506556 MYH1P12882 1939 aa2.31□□□□□ -2.04
THUMPD3P1-201ENST00000506556 PLXND1Q9Y4D7 1925 aa2.31□□□□□ -2.04
THUMPD3P1-201ENST00000506556 LOXHD1Q8IVV2 1947 aa2.3□□□□□ -2.04
THUMPD3P1-201ENST00000506556 IGKV2D-24A0A075B6R9 120 aa2.3□□□□□ -2.04
THUMPD3P1-201ENST00000506556 A0A0B4J2C4 111 aa2.3□□□□□ -2.04
THUMPD3P1-201ENST00000506556 H3BT86 120 aa2.3□□□□□ -2.04
THUMPD3P1-201ENST00000506556 LECT2O14960 151 aa2.3□□□□□ -2.04
THUMPD3P1-201ENST00000506556 LY6HO94772 140 aa2.3□□□□□ -2.04
THUMPD3P1-201ENST00000506556 HBDP02042 147 aa2.3□□□□□ -2.04
THUMPD3P1-201ENST00000506556 CTSDP07339 412 aaPredicted RBP2.3□□□□□ -2.04
THUMPD3P1-201ENST00000506556 PTHLHP12272 177 aa2.3□□□□□ -2.04
THUMPD3P1-201ENST00000506556 TMEM258P61165 79 aa2.3□□□□□ -2.04
THUMPD3P1-201ENST00000506556 BTG2P78543 158 aa2.3□□□□□ -2.04
THUMPD3P1-201ENST00000506556 DEFB103AP81534 67 aa2.3□□□□□ -2.04
THUMPD3P1-201ENST00000506556 CDK5R1Q15078 307 aa2.3□□□□□ -2.04
THUMPD3P1-201ENST00000506556 PYY3Q5JQD4 70 aa2.3□□□□□ -2.04
THUMPD3P1-201ENST00000506556 NOXRED1Q6NXP6 359 aa2.3□□□□□ -2.04
THUMPD3P1-201ENST00000506556 C7orf65Q6ZTY9 151 aa2.3□□□□□ -2.04
THUMPD3P1-201ENST00000506556 TTC9CQ8N5M4 171 aa2.3□□□□□ -2.04
THUMPD3P1-201ENST00000506556 MIR7-3HGQ8N6C7 128 aa2.3□□□□□ -2.04
THUMPD3P1-201ENST00000506556 SCGB3A1Q96QR1 104 aa2.3□□□□□ -2.04
THUMPD3P1-201ENST00000506556 AGPAT4-IT1Q9H0P7 198 aa2.3□□□□□ -2.04
THUMPD3P1-201ENST00000506556 ZNRD1Q9P1U0 126 aa2.3□□□□□ -2.04
THUMPD3P1-201ENST00000506556 ICOSQ9Y6W8 199 aa2.3□□□□□ -2.04
THUMPD3P1-201ENST00000506556 CHD8Q9HCK8 2581 aa2.3□□□□□ -2.04
THUMPD3P1-201ENST00000506556 USP34Q70CQ2 3546 aa2.3□□□□□ -2.04
THUMPD3P1-201ENST00000506556 DMDP11532 3685 aa2.3□□□□□ -2.04
THUMPD3P1-201ENST00000506556 ZDBF2Q9HCK1 2354 aa2.3□□□□□ -2.04
THUMPD3P1-201ENST00000506556 COL11A1P12107 1806 aaPredicted RBP2.29□□□□□ -2.04
THUMPD3P1-201ENST00000506556 PLXNA3P51805 1871 aa2.29□□□□□ -2.04
THUMPD3P1-201ENST00000506556 TRGV10A0A0A0MS01 117 aa2.29□□□□□ -2.04
THUMPD3P1-201ENST00000506556 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.29□□□□□ -2.04
THUMPD3P1-201ENST00000506556 C5orf67F2Z3F1 127 aa2.29□□□□□ -2.04
THUMPD3P1-201ENST00000506556 GEMIN2O14893 280 aaKnown RBP2.29□□□□□ -2.04
THUMPD3P1-201ENST00000506556 NDUFB2O95178 105 aa2.29□□□□□ -2.04
THUMPD3P1-201ENST00000506556 SOD1P00441 154 aa2.29□□□□□ -2.04
THUMPD3P1-201ENST00000506556 TNFP01375 233 aa2.29□□□□□ -2.04
THUMPD3P1-201ENST00000506556 HIST1H4AP62805 103 aaKnown RBP2.29□□□□□ -2.04
THUMPD3P1-201ENST00000506556 DYNLT1P63172 113 aa2.29□□□□□ -2.04
THUMPD3P1-201ENST00000506556 ZNF90Q03938 601 aa2.29□□□□□ -2.04
THUMPD3P1-201ENST00000506556 AKR1C1Q04828 323 aa2.29□□□□□ -2.04
THUMPD3P1-201ENST00000506556 EBI3Q14213 229 aa2.29□□□□□ -2.04
THUMPD3P1-201ENST00000506556 FAM229BQ4G0N7 80 aa2.29□□□□□ -2.04
THUMPD3P1-201ENST00000506556 C9orf153Q5TBE3 101 aa2.29□□□□□ -2.04
THUMPD3P1-201ENST00000506556 SIGLECL1Q8N7X8 197 aa2.29□□□□□ -2.04
THUMPD3P1-201ENST00000506556 RPRMQ9NS64 109 aa2.29□□□□□ -2.04
THUMPD3P1-201ENST00000506556 MYH7P12883 1935 aa2.29□□□□□ -2.04
THUMPD3P1-201ENST00000506556 TICRRQ7Z2Z1 1910 aa2.29□□□□□ -2.04
THUMPD3P1-201ENST00000506556 DSCAML1Q8TD84 2053 aa2.29□□□□□ -2.04
THUMPD3P1-201ENST00000506556 PLXNA1Q9UIW2 1896 aa2.29□□□□□ -2.04
THUMPD3P1-201ENST00000506556 MYO15AQ9UKN7 3530 aa2.29□□□□□ -2.04
THUMPD3P1-201ENST00000506556 IGLV4-60A0A075B6I1 120 aa2.28□□□□□ -2.04
THUMPD3P1-201ENST00000506556 IGKV2-28A0A075B6P5 120 aa2.28□□□□□ -2.04
THUMPD3P1-201ENST00000506556 TRAV12-2A0A075B6T6 113 aa2.28□□□□□ -2.04
THUMPD3P1-201ENST00000506556 A0A0D9SFI3 127 aa2.28□□□□□ -2.04
THUMPD3P1-201ENST00000506556 MUC21A0A0G2JKD1 596 aa2.28□□□□□ -2.04
THUMPD3P1-201ENST00000506556 OOSP1A8MZH6 123 aa2.28□□□□□ -2.04
THUMPD3P1-201ENST00000506556 PITX3O75364 302 aa2.28□□□□□ -2.04
THUMPD3P1-201ENST00000506556 IGKV2D-28P01615 120 aa2.28□□□□□ -2.04
THUMPD3P1-201ENST00000506556 DEFA4P12838 97 aa2.28□□□□□ -2.04
THUMPD3P1-201ENST00000506556 IL9P15248 144 aa2.28□□□□□ -2.04
THUMPD3P1-201ENST00000506556 BLCAPP62952 87 aa2.28□□□□□ -2.04
THUMPD3P1-201ENST00000506556 SUPT4H1P63272 117 aaKnown RBP2.28□□□□□ -2.04
THUMPD3P1-201ENST00000506556 ZNF846Q147U1 533 aa2.28□□□□□ -2.04
THUMPD3P1-201ENST00000506556 Q56UQ5 140 aa2.28□□□□□ -2.04
THUMPD3P1-201ENST00000506556 MIC13Q5XKP0 118 aa2.28□□□□□ -2.04
THUMPD3P1-201ENST00000506556 IGFL3Q6UXB1 125 aa2.28□□□□□ -2.04
THUMPD3P1-201ENST00000506556 CYB561D1Q8N8Q1 229 aa2.28□□□□□ -2.04
THUMPD3P1-201ENST00000506556 CLDND2Q8NHS1 167 aa2.28□□□□□ -2.04
THUMPD3P1-201ENST00000506556 DIRC1Q969H9 104 aa2.28□□□□□ -2.04
THUMPD3P1-201ENST00000506556 IMMP2LQ96T52 175 aa2.28□□□□□ -2.04
THUMPD3P1-201ENST00000506556 UPK3BQ9BT76 320 aa2.28□□□□□ -2.04
THUMPD3P1-201ENST00000506556 NAA60Q9H7X0 242 aa2.28□□□□□ -2.04
THUMPD3P1-201ENST00000506556 XAGE1AQ9HD64 81 aa2.28□□□□□ -2.04
THUMPD3P1-201ENST00000506556 TMEM14AQ9Y6G1 99 aa2.28□□□□□ -2.04
THUMPD3P1-201ENST00000506556 CHCHD2Q9Y6H1 151 aaPredicted RBP2.28□□□□□ -2.04
THUMPD3P1-201ENST00000506556 TRANK1O15050 2925 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms