RNA–Protein interactions for RNA: ENST00000505705.1

LIMCH1-206, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 3

Gene LIMCH1, Length 437 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-206ENST00000505705 C20orf144Q9BQM9 153 aa5.98□□□□□ -1.45
LIMCH1-206ENST00000505705 U3KQK5 164 aa5.98□□□□□ -1.45
LIMCH1-206ENST00000505705 TRAV21A0A0B4J279 112 aa5.97□□□□□ -1.45
LIMCH1-206ENST00000505705 LOC100996750A0A140TA64 210 aa5.97□□□□□ -1.45
LIMCH1-206ENST00000505705 H7BYZ3 331 aa5.97□□□□□ -1.45
LIMCH1-206ENST00000505705 MIFP14174 115 aa5.97□□□□□ -1.45
LIMCH1-206ENST00000505705 CRISP2P16562 243 aa5.97□□□□□ -1.45
LIMCH1-206ENST00000505705 IFITM2Q01629 132 aa5.97□□□□□ -1.45
LIMCH1-206ENST00000505705 PEA15Q15121 130 aa5.97□□□□□ -1.45
LIMCH1-206ENST00000505705 TMEM183BQ1AE95 376 aa5.97□□□□□ -1.45
LIMCH1-206ENST00000505705 RRN3P1Q2M238 152 aa5.97□□□□□ -1.45
LIMCH1-206ENST00000505705 ZNF674Q2M3X9 581 aa5.97□□□□□ -1.45
LIMCH1-206ENST00000505705 ZNF506Q5JVG8 444 aa5.97□□□□□ -1.45
LIMCH1-206ENST00000505705 BAGE2Q86Y30 109 aa5.97□□□□□ -1.45
LIMCH1-206ENST00000505705 C1orf158Q8N1D5 194 aa5.97□□□□□ -1.45
LIMCH1-206ENST00000505705 CSNK1G2-AS1Q8NCQ2 148 aa5.97□□□□□ -1.45
LIMCH1-206ENST00000505705 FAM19A4Q96LR4 140 aa5.97□□□□□ -1.45
LIMCH1-206ENST00000505705 FAM210AQ96ND0 272 aa5.97□□□□□ -1.45
LIMCH1-206ENST00000505705 C8orf49Q96NF6 230 aa5.97□□□□□ -1.45
LIMCH1-206ENST00000505705 KRTAP4-6Q9BYQ5 205 aa5.97□□□□□ -1.45
LIMCH1-206ENST00000505705 NAGKQ9UJ70 344 aa5.97□□□□□ -1.45
LIMCH1-206ENST00000505705 ZFP30Q9Y2G7 519 aa5.97□□□□□ -1.45
LIMCH1-206ENST00000505705 NOTCH1P46531 2555 aa5.97□□□□□ -1.45
LIMCH1-206ENST00000505705 NBEAL1Q6ZS30 2694 aa5.96□□□□□ -1.45
LIMCH1-206ENST00000505705 SMIM9A6NGZ8 99 aa5.96□□□□□ -1.46
LIMCH1-206ENST00000505705 CBY3A6NI87 242 aa5.96□□□□□ -1.46
LIMCH1-206ENST00000505705 ZNF705GA8MUZ8 300 aaPredicted RBP5.96□□□□□ -1.46
LIMCH1-206ENST00000505705 KLLNB2CW77 178 aa5.96□□□□□ -1.46
LIMCH1-206ENST00000505705 DEFB4AO15263 64 aa5.96□□□□□ -1.46
LIMCH1-206ENST00000505705 GCGP01275 180 aa5.96□□□□□ -1.46
LIMCH1-206ENST00000505705 IGLV2-11P01706 119 aa5.96□□□□□ -1.46
LIMCH1-206ENST00000505705 RPL35P42766 123 aaKnown RBP5.96□□□□□ -1.46
LIMCH1-206ENST00000505705 EMP1P54849 157 aa5.96□□□□□ -1.46
LIMCH1-206ENST00000505705 TAS2R60P59551 318 aa5.96□□□□□ -1.46
LIMCH1-206ENST00000505705 FAM159AQ6UWV7 190 aa5.96□□□□□ -1.46
LIMCH1-206ENST00000505705 ZNF705AQ6ZN79 300 aaPredicted RBP5.96□□□□□ -1.46
LIMCH1-206ENST00000505705 Q86TA4 180 aa5.96□□□□□ -1.46
LIMCH1-206ENST00000505705 ZFAND2AQ8N6M9 145 aa5.96□□□□□ -1.46
LIMCH1-206ENST00000505705 C2CD4CQ8TF44 421 aa5.96□□□□□ -1.46
LIMCH1-206ENST00000505705 A0A0J9YWU9 116 aa5.95□□□□□ -1.46
LIMCH1-206ENST00000505705 ZNF324O75467 553 aaPredicted RBP5.95□□□□□ -1.46
LIMCH1-206ENST00000505705 LTAP01374 205 aa5.95□□□□□ -1.46
LIMCH1-206ENST00000505705 PRM2P04554 102 aa5.95□□□□□ -1.46
LIMCH1-206ENST00000505705 RBMY1A1P0DJD3 496 aaKnown RBP5.95□□□□□ -1.46
LIMCH1-206ENST00000505705 RBMY1CP0DJD4 496 aa5.95□□□□□ -1.46
LIMCH1-206ENST00000505705 MGST1P10620 155 aaKnown RBP5.95□□□□□ -1.46
LIMCH1-206ENST00000505705 GNG4P50150 75 aa5.95□□□□□ -1.46
LIMCH1-206ENST00000505705 RBMY1FQ15415 496 aaKnown RBP5.95□□□□□ -1.46
LIMCH1-206ENST00000505705 CLLU1Q5K131 121 aa5.95□□□□□ -1.46
LIMCH1-206ENST00000505705 MUC21Q5SSG8 566 aa5.95□□□□□ -1.46
LIMCH1-206ENST00000505705 PRR9Q5T870 116 aa5.95□□□□□ -1.46
LIMCH1-206ENST00000505705 NHLRC2Q8NBF2 726 aa5.95□□□□□ -1.46
LIMCH1-206ENST00000505705 C11orf52Q96A22 123 aa5.95□□□□□ -1.46
LIMCH1-206ENST00000505705 TVP23CQ96ET8 276 aa5.95□□□□□ -1.46
LIMCH1-206ENST00000505705 NEU1Q99519 415 aa5.95□□□□□ -1.46
LIMCH1-206ENST00000505705 PYGO2Q9BRQ0 406 aa5.95□□□□□ -1.46
LIMCH1-206ENST00000505705 KLF12Q9Y4X4 402 aa5.95□□□□□ -1.46
LIMCH1-206ENST00000505705 X6R8D5 127 aa5.95□□□□□ -1.46
LIMCH1-206ENST00000505705 IGHV1OR15-1A0A075B7D0 117 aa5.94□□□□□ -1.46
LIMCH1-206ENST00000505705 IGHV4-28A0A0C4DH34 117 aa5.94□□□□□ -1.46
LIMCH1-206ENST00000505705 TRBV6-1A0A0K0K1D8 114 aa5.94□□□□□ -1.46
LIMCH1-206ENST00000505705 RAB19A4D1S5 217 aa5.94□□□□□ -1.46
LIMCH1-206ENST00000505705 TMEM189A5PLL7 270 aa5.94□□□□□ -1.46
LIMCH1-206ENST00000505705 FABP5P3A8MUU1 101 aa5.94□□□□□ -1.46
LIMCH1-206ENST00000505705 TMEM250H0YL14 139 aa5.94□□□□□ -1.46
LIMCH1-206ENST00000505705 PFN1P07737 140 aaKnown RBP5.94□□□□□ -1.46
LIMCH1-206ENST00000505705 Q6AWC8 147 aa5.94□□□□□ -1.46
LIMCH1-206ENST00000505705 PRR27Q6MZM9 219 aa5.94□□□□□ -1.46
LIMCH1-206ENST00000505705 Q6ZQT7 251 aa5.94□□□□□ -1.46
LIMCH1-206ENST00000505705 TMEM183AQ8IXX5 376 aa5.94□□□□□ -1.46
LIMCH1-206ENST00000505705 EIF4E3Q8N5X7 224 aaKnown RBP5.94□□□□□ -1.46
LIMCH1-206ENST00000505705 DAZAP1Q96EP5 407 aaKnown RBP5.94□□□□□ -1.46
LIMCH1-206ENST00000505705 C16orf74Q96GX8 76 aa5.94□□□□□ -1.46
LIMCH1-206ENST00000505705 DERL1Q9BUN8 251 aa5.94□□□□□ -1.46
LIMCH1-206ENST00000505705 PARLQ9H300 379 aa5.94□□□□□ -1.46
LIMCH1-206ENST00000505705 CXorf65A6NEN9 183 aa5.93□□□□□ -1.46
LIMCH1-206ENST00000505705 SNURFLB1AK76 121 aa5.93□□□□□ -1.46
LIMCH1-206ENST00000505705 ORM1P02763 201 aa5.93□□□□□ -1.46
LIMCH1-206ENST00000505705 SRP19P09132 144 aaKnown RBP5.93□□□□□ -1.46
LIMCH1-206ENST00000505705 AZU1P20160 251 aa5.93□□□□□ -1.46
LIMCH1-206ENST00000505705 ZNF80P51504 273 aaPredicted RBP5.93□□□□□ -1.46
LIMCH1-206ENST00000505705 CENPWQ5EE01 88 aa5.93□□□□□ -1.46
LIMCH1-206ENST00000505705 FAM162BQ5T6X4 162 aa5.93□□□□□ -1.46
LIMCH1-206ENST00000505705 ZC2HC1AQ96GY0 325 aa5.93□□□□□ -1.46
LIMCH1-206ENST00000505705 KCNS1Q96KK3 526 aa5.93□□□□□ -1.46
LIMCH1-206ENST00000505705 SMDT1Q9H4I9 107 aa5.93□□□□□ -1.46
LIMCH1-206ENST00000505705 SDF2L1Q9HCN8 221 aa5.93□□□□□ -1.46
LIMCH1-206ENST00000505705 BIN3Q9NQY0 253 aa5.93□□□□□ -1.46
LIMCH1-206ENST00000505705 FBN3Q75N90 2809 aa5.92□□□□□ -1.46
LIMCH1-206ENST00000505705 MEGF8Q7Z7M0 2845 aa5.92□□□□□ -1.46
LIMCH1-206ENST00000505705 TRGV11A0A075B6L2 103 aa5.92□□□□□ -1.46
LIMCH1-206ENST00000505705 ZNF727A8MUV8 499 aa5.92□□□□□ -1.46
LIMCH1-206ENST00000505705 SPART-AS1P0CW21 52 aa5.92□□□□□ -1.46
LIMCH1-206ENST00000505705 S100A4P26447 101 aaKnown RBP5.92□□□□□ -1.46
LIMCH1-206ENST00000505705 SRSF3P84103 164 aaKnown RBP5.92□□□□□ -1.46
LIMCH1-206ENST00000505705 OR5I1Q13606 314 aa5.92□□□□□ -1.46
LIMCH1-206ENST00000505705 ANXA2RQ3ZCQ2 193 aa5.92□□□□□ -1.46
LIMCH1-206ENST00000505705 ZNF493Q6ZR52 646 aa5.92□□□□□ -1.46
LIMCH1-206ENST00000505705 Q8NAQ8 132 aa5.92□□□□□ -1.46
LIMCH1-206ENST00000505705 TMEM263Q8WUH6 116 aaKnown RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms