RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 LENEPQ9Y5L5 61 aa7.29□□□□□ -1.24
NUP54-203ENST00000504173 TRBV7-9A0A0J9YWB2 115 aa7.28□□□□□ -1.24
NUP54-203ENST00000504173 LOC102723971A0A1B0GUV8 181 aa7.28□□□□□ -1.24
NUP54-203ENST00000504173 C7orf71A4D174 169 aa7.28□□□□□ -1.24
NUP54-203ENST00000504173 GPX1P07203 203 aa7.28□□□□□ -1.24
NUP54-203ENST00000504173 CRISP2P16562 243 aa7.28□□□□□ -1.24
NUP54-203ENST00000504173 RNASE4P34096 147 aaKnown RBP7.28□□□□□ -1.24
NUP54-203ENST00000504173 RAB14P61106 215 aa7.28□□□□□ -1.24
NUP54-203ENST00000504173 UBE2G1P62253 170 aa7.28□□□□□ -1.24
NUP54-203ENST00000504173 MEF2BQ02080 365 aaPredicted RBP7.28□□□□□ -1.24
NUP54-203ENST00000504173 KIR3DS1Q14943 382 aa7.28□□□□□ -1.24
NUP54-203ENST00000504173 GFI1BQ5VTD9 330 aa7.28□□□□□ -1.24
NUP54-203ENST00000504173 ZNF767PQ75MW2 155 aa7.28□□□□□ -1.24
NUP54-203ENST00000504173 PRNTQ86SH4 94 aa7.28□□□□□ -1.24
NUP54-203ENST00000504173 ZFAND2AQ8N6M9 145 aa7.28□□□□□ -1.24
NUP54-203ENST00000504173 OR11H2Q8NH07 326 aa7.28□□□□□ -1.24
NUP54-203ENST00000504173 FMC1Q96HJ9 113 aa7.28□□□□□ -1.24
NUP54-203ENST00000504173 FAM19A4Q96LR4 140 aa7.28□□□□□ -1.24
NUP54-203ENST00000504173 LINC00479Q96M42 142 aa7.28□□□□□ -1.24
NUP54-203ENST00000504173 HERC1Q15751 4861 aa7.28□□□□□ -1.24
NUP54-203ENST00000504173 DNAH10Q8IVF4 4471 aa7.27□□□□□ -1.25
NUP54-203ENST00000504173 TRAV12-3A0A0B4J271 114 aa7.27□□□□□ -1.25
NUP54-203ENST00000504173 RBFOX3A6NFN3 312 aa7.27□□□□□ -1.25
NUP54-203ENST00000504173 KLLNB2CW77 178 aa7.27□□□□□ -1.25
NUP54-203ENST00000504173 PDE6DO43924 150 aa7.27□□□□□ -1.25
NUP54-203ENST00000504173 IGLV2-11P01706 119 aa7.27□□□□□ -1.25
NUP54-203ENST00000504173 IFITM2Q01629 132 aa7.27□□□□□ -1.25
NUP54-203ENST00000504173 BTN1A1Q13410 526 aa7.27□□□□□ -1.25
NUP54-203ENST00000504173 TOR2AQ5JU69 321 aa7.27□□□□□ -1.25
NUP54-203ENST00000504173 ZNF506Q5JVG8 444 aa7.27□□□□□ -1.25
NUP54-203ENST00000504173 Q86TA4 180 aa7.27□□□□□ -1.25
NUP54-203ENST00000504173 C1orf158Q8N1D5 194 aa7.27□□□□□ -1.25
NUP54-203ENST00000504173 C2CD4CQ8TF44 421 aa7.27□□□□□ -1.25
NUP54-203ENST00000504173 RARRES2Q99969 163 aa7.27□□□□□ -1.25
NUP54-203ENST00000504173 C20orf144Q9BQM9 153 aa7.27□□□□□ -1.25
NUP54-203ENST00000504173 NIPSNAP3BQ9BS92 247 aa7.27□□□□□ -1.25
NUP54-203ENST00000504173 TREM1Q9NP99 234 aa7.27□□□□□ -1.25
NUP54-203ENST00000504173 S100A9P06702 114 aaKnown RBP7.26□□□□□ -1.25
NUP54-203ENST00000504173 RBMY1A1P0DJD3 496 aaKnown RBP7.26□□□□□ -1.25
NUP54-203ENST00000504173 RBMY1CP0DJD4 496 aa7.26□□□□□ -1.25
NUP54-203ENST00000504173 RBMY1FQ15415 496 aaKnown RBP7.26□□□□□ -1.25
NUP54-203ENST00000504173 TMEM183BQ1AE95 376 aa7.26□□□□□ -1.25
NUP54-203ENST00000504173 SAPCD1Q5SSQ6 148 aa7.26□□□□□ -1.25
NUP54-203ENST00000504173 PRR9Q5T870 116 aa7.26□□□□□ -1.25
NUP54-203ENST00000504173 ZNF705AQ6ZN79 300 aaPredicted RBP7.26□□□□□ -1.25
NUP54-203ENST00000504173 TMEM256Q8N2U0 113 aa7.26□□□□□ -1.25
NUP54-203ENST00000504173 C11orf52Q96A22 123 aa7.26□□□□□ -1.25
NUP54-203ENST00000504173 TVP23CQ96ET8 276 aa7.26□□□□□ -1.25
NUP54-203ENST00000504173 FAM210AQ96ND0 272 aa7.26□□□□□ -1.25
NUP54-203ENST00000504173 C8orf49Q96NF6 230 aa7.26□□□□□ -1.25
NUP54-203ENST00000504173 LINC01587Q99440 93 aa7.26□□□□□ -1.25
NUP54-203ENST00000504173 EIF5A2Q9GZV4 153 aaKnown RBP7.26□□□□□ -1.25
NUP54-203ENST00000504173 KLF12Q9Y4X4 402 aa7.26□□□□□ -1.25
NUP54-203ENST00000504173 X6R8D5 127 aa7.26□□□□□ -1.25
NUP54-203ENST00000504173 UBR4Q5T4S7 5183 aa7.26□□□□□ -1.25
NUP54-203ENST00000504173 TRBV6-1A0A0K0K1D8 114 aa7.25□□□□□ -1.25
NUP54-203ENST00000504173 H7BYZ3 331 aa7.25□□□□□ -1.25
NUP54-203ENST00000504173 SMUG1Q53HV7 270 aa7.25□□□□□ -1.25
NUP54-203ENST00000504173 MED9Q9NWA0 146 aa7.25□□□□□ -1.25
NUP54-203ENST00000504173 IGHV4-28A0A0C4DH34 117 aa7.24□□□□□ -1.25
NUP54-203ENST00000504173 SMIM9A6NGZ8 99 aa7.24□□□□□ -1.25
NUP54-203ENST00000504173 ZNF705GA8MUZ8 300 aaPredicted RBP7.24□□□□□ -1.25
NUP54-203ENST00000504173 GCGP01275 180 aa7.24□□□□□ -1.25
NUP54-203ENST00000504173 MIFP14174 115 aa7.24□□□□□ -1.25
NUP54-203ENST00000504173 HTN1P15515 57 aa7.24□□□□□ -1.25
NUP54-203ENST00000504173 RPL35P42766 123 aaKnown RBP7.24□□□□□ -1.25
NUP54-203ENST00000504173 RRN3P1Q2M238 152 aa7.24□□□□□ -1.25
NUP54-203ENST00000504173 CLLU1Q5K131 121 aa7.24□□□□□ -1.25
NUP54-203ENST00000504173 NEU1Q99519 415 aa7.24□□□□□ -1.25
NUP54-203ENST00000504173 PYGO2Q9BRQ0 406 aa7.24□□□□□ -1.25
NUP54-203ENST00000504173 EDA2RQ9HAV5 297 aa7.24□□□□□ -1.25
NUP54-203ENST00000504173 ZFP30Q9Y2G7 519 aa7.24□□□□□ -1.25
NUP54-203ENST00000504173 TRAV21A0A0B4J279 112 aa7.23□□□□□ -1.25
NUP54-203ENST00000504173 TMEM250H0YL14 139 aa7.23□□□□□ -1.25
NUP54-203ENST00000504173 RGS13O14921 159 aa7.23□□□□□ -1.25
NUP54-203ENST00000504173 DEFB4AO15263 64 aa7.23□□□□□ -1.25
NUP54-203ENST00000504173 ZNF324O75467 553 aaPredicted RBP7.23□□□□□ -1.25
NUP54-203ENST00000504173 LTAP01374 205 aa7.23□□□□□ -1.25
NUP54-203ENST00000504173 CEBPGP53567 150 aa7.23□□□□□ -1.25
NUP54-203ENST00000504173 TAS2R60P59551 318 aa7.23□□□□□ -1.25
NUP54-203ENST00000504173 Q6AWC8 147 aa7.23□□□□□ -1.25
NUP54-203ENST00000504173 BAGE2Q86Y30 109 aa7.23□□□□□ -1.25
NUP54-203ENST00000504173 Q8NAQ8 132 aa7.23□□□□□ -1.25
NUP54-203ENST00000504173 NHLRC2Q8NBF2 726 aa7.23□□□□□ -1.25
NUP54-203ENST00000504173 DERL1Q9BUN8 251 aa7.23□□□□□ -1.25
NUP54-203ENST00000504173 NAGKQ9UJ70 344 aa7.23□□□□□ -1.25
NUP54-203ENST00000504173 IGHV1OR15-1A0A075B7D0 117 aa7.22□□□□□ -1.25
NUP54-203ENST00000504173 A0A0J9YWU9 116 aa7.22□□□□□ -1.25
NUP54-203ENST00000504173 RAB19A4D1S5 217 aa7.22□□□□□ -1.25
NUP54-203ENST00000504173 NDUFS6O75380 124 aaKnown RBP7.22□□□□□ -1.25
NUP54-203ENST00000504173 PRM2P04554 102 aa7.22□□□□□ -1.25
NUP54-203ENST00000504173 PFN1P07737 140 aaKnown RBP7.22□□□□□ -1.25
NUP54-203ENST00000504173 GNG4P50150 75 aa7.22□□□□□ -1.25
NUP54-203ENST00000504173 ZNF80P51504 273 aaPredicted RBP7.22□□□□□ -1.25
NUP54-203ENST00000504173 PEA15Q15121 130 aa7.22□□□□□ -1.25
NUP54-203ENST00000504173 ZNF674Q2M3X9 581 aa7.22□□□□□ -1.25
NUP54-203ENST00000504173 CENPWQ5EE01 88 aa7.22□□□□□ -1.25
NUP54-203ENST00000504173 MUC21Q5SSG8 566 aa7.22□□□□□ -1.25
NUP54-203ENST00000504173 Q6ZQT7 251 aa7.22□□□□□ -1.25
NUP54-203ENST00000504173 TMEM183AQ8IXX5 376 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms