RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 ZNF324O75467 553 aaPredicted RBP11.84□□□□□ -0.51
SCLT1-205ENST00000503401 NMBP08949 121 aa11.84□□□□□ -0.51
SCLT1-205ENST00000503401 TAS2R60P59551 318 aa11.84□□□□□ -0.51
SCLT1-205ENST00000503401 NANOS2P60321 138 aaKnown RBP11.84□□□□□ -0.51
SCLT1-205ENST00000503401 PMS2P11Q13670 270 aa11.84□□□□□ -0.51
SCLT1-205ENST00000503401 PRNTQ86SH4 94 aa11.84□□□□□ -0.51
SCLT1-205ENST00000503401 C20orf144Q9BQM9 153 aa11.84□□□□□ -0.51
SCLT1-205ENST00000503401 PSG8Q9UQ74 426 aa11.84□□□□□ -0.51
SCLT1-205ENST00000503401 TRBV7-9A0A0J9YWB2 115 aa11.83□□□□□ -0.52
SCLT1-205ENST00000503401 TEX46H3BTG2 121 aa11.83□□□□□ -0.52
SCLT1-205ENST00000503401 FLI1Q01543 452 aaPredicted RBP11.83□□□□□ -0.52
SCLT1-205ENST00000503401 TMEM75Q8N9X5 138 aa11.83□□□□□ -0.52
SCLT1-205ENST00000503401 C11orf45Q8TAV5 145 aa11.83□□□□□ -0.52
SCLT1-205ENST00000503401 C8orf49Q96NF6 230 aa11.83□□□□□ -0.52
SCLT1-205ENST00000503401 TREM1Q9NP99 234 aa11.83□□□□□ -0.52
SCLT1-205ENST00000503401 LENEPQ9Y5L5 61 aa11.83□□□□□ -0.52
SCLT1-205ENST00000503401 ARL2-SNX15V9GYD0 113 aa11.83□□□□□ -0.52
SCLT1-205ENST00000503401 HIST1H2BAQ96A08 127 aa11.82□□□□□ -0.52
SCLT1-205ENST00000503401 C11orf94C9JXX5 98 aa11.82□□□□□ -0.52
SCLT1-205ENST00000503401 PPT1P50897 306 aa11.82□□□□□ -0.52
SCLT1-205ENST00000503401 SCO2A0A1W2PP80 73 aa11.81□□□□□ -0.52
SCLT1-205ENST00000503401 MANBALQ9NQG1 85 aa11.81□□□□□ -0.52
SCLT1-205ENST00000503401 PLAC8L1A1L4L8 177 aa11.8□□□□□ -0.52
SCLT1-205ENST00000503401 TMEM189A5PLL7 270 aa11.8□□□□□ -0.52
SCLT1-205ENST00000503401 CXorf65A6NEN9 183 aa11.8□□□□□ -0.52
SCLT1-205ENST00000503401 CLLU1Q5K131 121 aa11.8□□□□□ -0.52
SCLT1-205ENST00000503401 MUC21Q5SSG8 566 aa11.8□□□□□ -0.52
SCLT1-205ENST00000503401 FAM222AQ5U5X8 452 aa11.8□□□□□ -0.52
SCLT1-205ENST00000503401 RNASE8Q8TDE3 154 aaKnown RBP11.8□□□□□ -0.52
SCLT1-205ENST00000503401 PYGO2Q9BRQ0 406 aa11.8□□□□□ -0.52
SCLT1-205ENST00000503401 NDFIP1Q9BT67 221 aa11.8□□□□□ -0.52
SCLT1-205ENST00000503401 C3orf84H3BNL1 204 aa11.79□□□□□ -0.52
SCLT1-205ENST00000503401 CASC10Q5T4H9 136 aa11.79□□□□□ -0.52
SCLT1-205ENST00000503401 Q6AWC8 147 aa11.79□□□□□ -0.52
SCLT1-205ENST00000503401 Q86TA4 180 aa11.79□□□□□ -0.52
SCLT1-205ENST00000503401 C16orf74Q96GX8 76 aa11.79□□□□□ -0.52
SCLT1-205ENST00000503401 DKK2Q9UBU2 259 aa11.79□□□□□ -0.52
SCLT1-205ENST00000503401 TP53TG3Q9ULZ0 132 aa11.79□□□□□ -0.52
SCLT1-205ENST00000503401 CBY3A6NI87 242 aa11.78□□□□□ -0.52
SCLT1-205ENST00000503401 AKR1C3P42330 323 aa11.78□□□□□ -0.52
SCLT1-205ENST00000503401 ZNF80P51504 273 aaPredicted RBP11.78□□□□□ -0.52
SCLT1-205ENST00000503401 BLOC1S1P78537 153 aa11.78□□□□□ -0.52
SCLT1-205ENST00000503401 LYPD6BQ8NI32 183 aa11.78□□□□□ -0.52
SCLT1-205ENST00000503401 TMEM263Q8WUH6 116 aaKnown RBP11.78□□□□□ -0.52
SCLT1-205ENST00000503401 PCNPQ8WW12 178 aaKnown RBP11.78□□□□□ -0.52
SCLT1-205ENST00000503401 TCEAL7Q9BRU2 100 aa11.78□□□□□ -0.52
SCLT1-205ENST00000503401 NAGKQ9UJ70 344 aa11.78□□□□□ -0.52
SCLT1-205ENST00000503401 IGHV1OR15-1A0A075B7D0 117 aa11.78□□□□□ -0.52
SCLT1-205ENST00000503401 GCGP01275 180 aa11.78□□□□□ -0.52
SCLT1-205ENST00000503401 SPART-AS1P0CW21 52 aa11.78□□□□□ -0.52
SCLT1-205ENST00000503401 UBE2G1P62253 170 aa11.78□□□□□ -0.52
SCLT1-205ENST00000503401 C12orf74Q32Q52 190 aa11.78□□□□□ -0.52
SCLT1-205ENST00000503401 Q6ZTC4 211 aa11.78□□□□□ -0.52
SCLT1-205ENST00000503401 C2CD4CQ8TF44 421 aa11.78□□□□□ -0.52
SCLT1-205ENST00000503401 FBLL1A6NHQ2 334 aaKnown RBP11.77□□□□□ -0.53
SCLT1-205ENST00000503401 IFNA1P01562 189 aa11.77□□□□□ -0.53
SCLT1-205ENST00000503401 BCL2P10415 239 aa11.77□□□□□ -0.53
SCLT1-205ENST00000503401 EIF4E3Q8N5X7 224 aaKnown RBP11.77□□□□□ -0.53
SCLT1-205ENST00000503401 FMC1Q96HJ9 113 aa11.77□□□□□ -0.53
SCLT1-205ENST00000503401 NOP10Q9NPE3 64 aaKnown RBP11.77□□□□□ -0.53
SCLT1-205ENST00000503401 KLF12Q9Y4X4 402 aa11.77□□□□□ -0.53
SCLT1-205ENST00000503401 TMEM183BQ1AE95 376 aa11.76□□□□□ -0.53
SCLT1-205ENST00000503401 SMUG1Q53HV7 270 aa11.76□□□□□ -0.53
SCLT1-205ENST00000503401 SAPCD1Q5SSQ6 148 aa11.76□□□□□ -0.53
SCLT1-205ENST00000503401 ZNF493Q6ZR52 646 aa11.76□□□□□ -0.53
SCLT1-205ENST00000503401 PHLDA1Q8WV24 401 aaPredicted RBP11.76□□□□□ -0.53
SCLT1-205ENST00000503401 TRAV21A0A0B4J279 112 aa11.75□□□□□ -0.53
SCLT1-205ENST00000503401 MEF2BQ02080 365 aaPredicted RBP11.75□□□□□ -0.53
SCLT1-205ENST00000503401 NHLRC2Q8NBF2 726 aa11.75□□□□□ -0.53
SCLT1-205ENST00000503401 LINC00467Q9BRT7 94 aa11.75□□□□□ -0.53
SCLT1-205ENST00000503401 DERL1Q9BUN8 251 aa11.75□□□□□ -0.53
SCLT1-205ENST00000503401 GSN-AS1Q9NRJ2 163 aa11.75□□□□□ -0.53
SCLT1-205ENST00000503401 KMT2CQ8NEZ4 4911 aaKnown RBP11.75□□□□□ -0.53
SCLT1-205ENST00000503401 LYSTQ99698 3801 aa11.75□□□□□ -0.53
SCLT1-205ENST00000503401 ANXA2RQ3ZCQ2 193 aa11.75□□□□□ -0.53
SCLT1-205ENST00000503401 FAM159AQ6UWV7 190 aa11.75□□□□□ -0.53
SCLT1-205ENST00000503401 C11orf72Q8NBR9 251 aa11.75□□□□□ -0.53
SCLT1-205ENST00000503401 VAX2Q9UIW0 290 aa11.75□□□□□ -0.53
SCLT1-205ENST00000503401 TIMM8BQ9Y5J9 83 aaPredicted RBP11.75□□□□□ -0.53
SCLT1-205ENST00000503401 SNURFLB1AK76 121 aa11.74□□□□□ -0.53
SCLT1-205ENST00000503401 LTAP01374 205 aa11.74□□□□□ -0.53
SCLT1-205ENST00000503401 DEFB130BP0DP73 79 aa11.74□□□□□ -0.53
SCLT1-205ENST00000503401 DEFB130AP0DP74 79 aa11.74□□□□□ -0.53
SCLT1-205ENST00000503401 TMEM183AQ8IXX5 376 aa11.74□□□□□ -0.53
SCLT1-205ENST00000503401 ZC2HC1AQ96GY0 325 aa11.74□□□□□ -0.53
SCLT1-205ENST00000503401 C11orf21Q9P2W6 132 aa11.74□□□□□ -0.53
SCLT1-205ENST00000503401 LYRM9A8MSI8 78 aa11.73□□□□□ -0.53
SCLT1-205ENST00000503401 PFN1P07737 140 aaKnown RBP11.73□□□□□ -0.53
SCLT1-205ENST00000503401 RPL35P42766 123 aaKnown RBP11.73□□□□□ -0.53
SCLT1-205ENST00000503401 RAB14P61106 215 aa11.73□□□□□ -0.53
SCLT1-205ENST00000503401 C11orf52Q96A22 123 aa11.73□□□□□ -0.53
SCLT1-205ENST00000503401 TXNDC17Q9BRA2 123 aa11.73□□□□□ -0.53
SCLT1-205ENST00000503401 MED9Q9NWA0 146 aa11.73□□□□□ -0.53
SCLT1-205ENST00000503401 ZFP30Q9Y2G7 519 aa11.73□□□□□ -0.53
SCLT1-205ENST00000503401 TRBV6-1A0A0K0K1D8 114 aa11.72□□□□□ -0.53
SCLT1-205ENST00000503401 LINC00862A6NCI5 91 aa11.72□□□□□ -0.53
SCLT1-205ENST00000503401 GNRH2O43555 120 aa11.72□□□□□ -0.53
SCLT1-205ENST00000503401 CRIP1P50238 77 aa11.72□□□□□ -0.53
SCLT1-205ENST00000503401 DAD1P61803 113 aa11.72□□□□□ -0.53
SCLT1-205ENST00000503401 CEMP1Q6PRD7 247 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms