RNA–Protein interactions for RNA: ENST00000498595.5

HDLBP-247, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-247ENST00000498595 PRO0255Q9UI72 69 aa10.02□□□□□ -0.81
HDLBP-247ENST00000498595 HSPB11Q9Y547 144 aa10.02□□□□□ -0.81
HDLBP-247ENST00000498595 A0A096LPF7 62 aa10.01□□□□□ -0.81
HDLBP-247ENST00000498595 IGHV3-53P01767 116 aa10.01□□□□□ -0.81
HDLBP-247ENST00000498595 H2BFSP57053 126 aa10.01□□□□□ -0.81
HDLBP-247ENST00000498595 FAM74A1Q5RGS3 127 aa10.01□□□□□ -0.81
HDLBP-247ENST00000498595 VSIG2Q96IQ7 327 aa10.01□□□□□ -0.81
HDLBP-247ENST00000498595 PTTG2Q9NZH5 202 aa10.01□□□□□ -0.81
HDLBP-247ENST00000498595 SIVA1O15304 175 aa10□□□□□ -0.81
HDLBP-247ENST00000498595 MPC2O95563 127 aa10□□□□□ -0.81
HDLBP-247ENST00000498595 RPL12P30050 165 aaKnown RBP10□□□□□ -0.81
HDLBP-247ENST00000498595 ZNF266Q14584 549 aa10□□□□□ -0.81
HDLBP-247ENST00000498595 PRR9Q5T870 116 aa10□□□□□ -0.81
HDLBP-247ENST00000498595 FAM159AQ6UWV7 190 aa10□□□□□ -0.81
HDLBP-247ENST00000498595 SPATA12Q7Z6I5 190 aa10□□□□□ -0.81
HDLBP-247ENST00000498595 CMTM2Q8TAZ6 248 aa10□□□□□ -0.81
HDLBP-247ENST00000498595 HYLS1Q96M11 299 aa10□□□□□ -0.81
HDLBP-247ENST00000498595 MARVELD1Q9BSK0 173 aa10□□□□□ -0.81
HDLBP-247ENST00000498595 SMIM3Q9BZL3 60 aa10□□□□□ -0.81
HDLBP-247ENST00000498595 TP53TG3Q9ULZ0 132 aa10□□□□□ -0.81
HDLBP-247ENST00000498595 HHLA3Q9XRX5 114 aa10□□□□□ -0.81
HDLBP-247ENST00000498595 LENEPQ9Y5L5 61 aa10□□□□□ -0.81
HDLBP-247ENST00000498595 DNAH11Q96DT5 4516 aa10□□□□□ -0.81
HDLBP-247ENST00000498595 TRGV4A0A0C4DH28 118 aa9.99□□□□□ -0.81
HDLBP-247ENST00000498595 A0A1W2PPV4 95 aa9.99□□□□□ -0.81
HDLBP-247ENST00000498595 CDK2AP2O75956 126 aa9.99□□□□□ -0.81
HDLBP-247ENST00000498595 MRPL23Q16540 153 aaKnown RBP9.99□□□□□ -0.81
HDLBP-247ENST00000498595 MUC21Q5SSG8 566 aa9.99□□□□□ -0.81
HDLBP-247ENST00000498595 KRTAP1-5Q9BYS1 174 aa9.99□□□□□ -0.81
HDLBP-247ENST00000498595 OTORQ9NRC9 128 aa9.99□□□□□ -0.81
HDLBP-247ENST00000498595 TRGV11A0A075B6L2 103 aa9.98□□□□□ -0.81
HDLBP-247ENST00000498595 EREGO14944 169 aa9.98□□□□□ -0.81
HDLBP-247ENST00000498595 NXPH4O95158 308 aa9.98□□□□□ -0.81
HDLBP-247ENST00000498595 IFITM3Q01628 133 aa9.98□□□□□ -0.81
HDLBP-247ENST00000498595 ACOT6Q3I5F7 207 aaPredicted RBP9.98□□□□□ -0.81
HDLBP-247ENST00000498595 PCNPQ8WW12 178 aaKnown RBP9.98□□□□□ -0.81
HDLBP-247ENST00000498595 C8orf49Q96NF6 230 aa9.98□□□□□ -0.81
HDLBP-247ENST00000498595 SPXQ9BT56 116 aa9.98□□□□□ -0.81
HDLBP-247ENST00000498595 MBD2Q9UBB5 411 aa9.98□□□□□ -0.81
HDLBP-247ENST00000498595 RPH3ALQ9UNE2 315 aa9.98□□□□□ -0.81
HDLBP-247ENST00000498595 TRAV9-2A0A087WT02 112 aa9.97□□□□□ -0.81
HDLBP-247ENST00000498595 DIRC3C9JPN6 131 aa9.97□□□□□ -0.81
HDLBP-247ENST00000498595 CRYBA4P53673 196 aa9.97□□□□□ -0.81
HDLBP-247ENST00000498595 TMEM183BQ1AE95 376 aa9.97□□□□□ -0.81
HDLBP-247ENST00000498595 TMEM183AQ8IXX5 376 aa9.97□□□□□ -0.81
HDLBP-247ENST00000498595 TMED6Q8WW62 240 aa9.97□□□□□ -0.81
HDLBP-247ENST00000498595 NAGKQ9UJ70 344 aa9.97□□□□□ -0.81
HDLBP-247ENST00000498595 PGPA6NDG6 321 aa9.96□□□□□ -0.82
HDLBP-247ENST00000498595 SRIP30626 198 aa9.96□□□□□ -0.82
HDLBP-247ENST00000498595 LINC00315P59091 139 aa9.96□□□□□ -0.82
HDLBP-247ENST00000498595 Q6AWC8 147 aa9.96□□□□□ -0.82
HDLBP-247ENST00000498595 PQLC2Q6ZP29 291 aa9.96□□□□□ -0.82
HDLBP-247ENST00000498595 Q6ZQT7 251 aa9.96□□□□□ -0.82
HDLBP-247ENST00000498595 NEGR1Q7Z3B1 354 aa9.96□□□□□ -0.82
HDLBP-247ENST00000498595 DYNC1H1Q14204 4646 aaKnown RBP9.95□□□□□ -0.82
HDLBP-247ENST00000498595 A6NHS1 94 aa9.95□□□□□ -0.82
HDLBP-247ENST00000498595 ORM1P02763 201 aa9.95□□□□□ -0.82
HDLBP-247ENST00000498595 FHL2Q14192 279 aa9.95□□□□□ -0.82
HDLBP-247ENST00000498595 NFE4Q86UQ8 179 aa9.95□□□□□ -0.82
HDLBP-247ENST00000498595 MAPKAPK5-AS1Q8N8E1 139 aa9.95□□□□□ -0.82
HDLBP-247ENST00000498595 MDFICQ9P1T7 246 aa9.95□□□□□ -0.82
HDLBP-247ENST00000498595 TRAV21A0A0B4J279 112 aa9.94□□□□□ -0.82
HDLBP-247ENST00000498595 ERVFC1-1P60608 527 aa9.94□□□□□ -0.82
HDLBP-247ENST00000498595 GOLT1AQ6ZVE7 132 aa9.94□□□□□ -0.82
HDLBP-247ENST00000498595 ARL6IP6Q8N6S5 226 aa9.94□□□□□ -0.82
HDLBP-247ENST00000498595 OR10G4Q8NGN3 311 aa9.94□□□□□ -0.82
HDLBP-247ENST00000498595 NDFIP1Q9BT67 221 aa9.94□□□□□ -0.82
HDLBP-247ENST00000498595 C9JCJ5 164 aa9.93□□□□□ -0.82
HDLBP-247ENST00000498595 LYPD5Q6UWN5 251 aa9.93□□□□□ -0.82
HDLBP-247ENST00000498595 IQCF2Q8IXL9 164 aa9.93□□□□□ -0.82
HDLBP-247ENST00000498595 OR4C5Q8NGB2 326 aa9.93□□□□□ -0.82
HDLBP-247ENST00000498595 OR10G9Q8NGN4 311 aa9.93□□□□□ -0.82
HDLBP-247ENST00000498595 OR10G7Q8NGN6 311 aa9.93□□□□□ -0.82
HDLBP-247ENST00000498595 RASL10AQ92737 203 aa9.93□□□□□ -0.82
HDLBP-247ENST00000498595 KCNS1Q96KK3 526 aa9.93□□□□□ -0.82
HDLBP-247ENST00000498595 TXNDC17Q9BRA2 123 aa9.93□□□□□ -0.82
HDLBP-247ENST00000498595 SDF2L1Q9HCN8 221 aa9.93□□□□□ -0.82
HDLBP-247ENST00000498595 TREM1Q9NP99 234 aa9.93□□□□□ -0.82
HDLBP-247ENST00000498595 LY96Q9Y6Y9 160 aa9.93□□□□□ -0.82
HDLBP-247ENST00000498595 K7EQM0 130 aa9.92□□□□□ -0.82
HDLBP-247ENST00000498595 M0R2P5 195 aa9.92□□□□□ -0.82
HDLBP-247ENST00000498595 EIF3GO75821 320 aaKnown RBP eCLIP9.92□□□□□ -0.82
HDLBP-247ENST00000498595 SFTA3P0C7M3 94 aa9.92□□□□□ -0.82
HDLBP-247ENST00000498595 GYPEP15421 78 aa9.92□□□□□ -0.82
HDLBP-247ENST00000498595 EVI2AP22794 236 aa9.92□□□□□ -0.82
HDLBP-247ENST00000498595 RAB2AP61019 212 aa9.92□□□□□ -0.82
HDLBP-247ENST00000498595 TDRG1Q3Y452 100 aa9.92□□□□□ -0.82
HDLBP-247ENST00000498595 ZNF479Q96JC4 524 aa9.92□□□□□ -0.82
HDLBP-247ENST00000498595 TRAV4A0A0B4J268 109 aa9.91□□□□□ -0.82
HDLBP-247ENST00000498595 SERTM2A0A1B0GWG4 89 aa9.91□□□□□ -0.82
HDLBP-247ENST00000498595 K7EP13 123 aa9.91□□□□□ -0.82
HDLBP-247ENST00000498595 K7EQD1 137 aa9.91□□□□□ -0.82
HDLBP-247ENST00000498595 SH2D6Q7Z4S9 175 aa9.91□□□□□ -0.82
HDLBP-247ENST00000498595 WFDC1Q9HC57 220 aa9.91□□□□□ -0.82
HDLBP-247ENST00000498595 PGPEP1Q9NXJ5 209 aa9.91□□□□□ -0.82
HDLBP-247ENST00000498595 F6UZH7 168 aa9.9□□□□□ -0.82
HDLBP-247ENST00000498595 HMGB3O15347 200 aaKnown RBP9.9□□□□□ -0.82
HDLBP-247ENST00000498595 MBP02144 154 aa9.9□□□□□ -0.82
HDLBP-247ENST00000498595 CDC34P49427 236 aaPredicted RBP9.9□□□□□ -0.82
HDLBP-247ENST00000498595 KRTAP10-2P60368 255 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms