RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 MED31Q9Y3C7 131 aa0.21□□□□□ -2.38
RBM39-242ENST00000498280 FAM135BQ49AJ0 1406 aa0.21□□□□□ -2.38
RBM39-242ENST00000498280 ABCA13Q86UQ4 5058 aa0.2□□□□□ -2.38
RBM39-242ENST00000498280 ANKHD1Q8IWZ3 2542 aaKnown RBP0.2□□□□□ -2.38
RBM39-242ENST00000498280 LOC285556D6RIA3 1793 aa0.2□□□□□ -2.38
RBM39-242ENST00000498280 EPPK1P58107 5090 aaKnown RBP0.2□□□□□ -2.38
RBM39-242ENST00000498280 A0A1W2PPB8 328 aa0.2□□□□□ -2.38
RBM39-242ENST00000498280 A0A1W2PRS3 328 aa0.2□□□□□ -2.38
RBM39-242ENST00000498280 BBIP1A8MTZ0 92 aa0.2□□□□□ -2.38
RBM39-242ENST00000498280 KIR3DP1A8MWS1 328 aa0.2□□□□□ -2.38
RBM39-242ENST00000498280 H3BMG7 143 aa0.2□□□□□ -2.38
RBM39-242ENST00000498280 PFDN1O60925 122 aa0.2□□□□□ -2.38
RBM39-242ENST00000498280 SAA1P0DJI8 122 aaPredicted RBP0.2□□□□□ -2.38
RBM39-242ENST00000498280 SLC25A4P12235 298 aa0.2□□□□□ -2.38
RBM39-242ENST00000498280 RPL7P18124 248 aaKnown RBP0.2□□□□□ -2.38
RBM39-242ENST00000498280 CRYGSP22914 178 aa0.2□□□□□ -2.38
RBM39-242ENST00000498280 RPS3P23396 243 aaKnown RBP eCLIP0.2□□□□□ -2.38
RBM39-242ENST00000498280 POLR2HP52434 150 aaKnown RBP0.2□□□□□ -2.38
RBM39-242ENST00000498280 CAV3P56539 151 aa0.2□□□□□ -2.38
RBM39-242ENST00000498280 FXYD6P3P58550 94 aa0.2□□□□□ -2.38
RBM39-242ENST00000498280 GLYATL3Q5SZD4 288 aa0.2□□□□□ -2.38
RBM39-242ENST00000498280 XAF1Q6GPH4 301 aa0.2□□□□□ -2.38
RBM39-242ENST00000498280 TCTEX1D1Q8N7M0 179 aa0.2□□□□□ -2.38
RBM39-242ENST00000498280 TMEM229BQ8NBD8 167 aa0.2□□□□□ -2.38
RBM39-242ENST00000498280 MORN4Q8NDC4 146 aa0.2□□□□□ -2.38
RBM39-242ENST00000498280 LINC00208Q96KT6 92 aa0.2□□□□□ -2.38
RBM39-242ENST00000498280 LXNQ9BS40 222 aa0.2□□□□□ -2.38
RBM39-242ENST00000498280 STAB1Q9NY15 2570 aa0.2□□□□□ -2.38
RBM39-242ENST00000498280 KCPQ6ZWJ8 1503 aa0.19□□□□□ -2.38
RBM39-242ENST00000498280 SPTBP11277 2137 aa0.19□□□□□ -2.38
RBM39-242ENST00000498280 HYDINQ4G0P3 5121 aa0.19□□□□□ -2.38
RBM39-242ENST00000498280 LOC107984640A0A0U1RRK4 108 aa0.19□□□□□ -2.38
RBM39-242ENST00000498280 LOC107986453A0A1B0GWG9 222 aa0.19□□□□□ -2.38
RBM39-242ENST00000498280 ARL5CA6NH57 179 aa0.19□□□□□ -2.38
RBM39-242ENST00000498280 E7EQ34 232 aa0.19□□□□□ -2.38
RBM39-242ENST00000498280 M0QZK8 103 aa0.19□□□□□ -2.38
RBM39-242ENST00000498280 GYPBP06028 91 aa0.19□□□□□ -2.38
RBM39-242ENST00000498280 C3orf62Q6ZUJ4 267 aa0.19□□□□□ -2.38
RBM39-242ENST00000498280 OR51A4Q8NGJ6 313 aa0.19□□□□□ -2.38
RBM39-242ENST00000498280 CBLN4Q9NTU7 201 aa0.19□□□□□ -2.38
RBM39-242ENST00000498280 COMMD3Q9UBI1 195 aa0.19□□□□□ -2.38
RBM39-242ENST00000498280 MPC1Q9Y5U8 109 aa0.19□□□□□ -2.38
RBM39-242ENST00000498280 KIAA1549LQ6ZVL6 1849 aa0.19□□□□□ -2.38
RBM39-242ENST00000498280 ZCCHC11Q5TAX3 1644 aaKnown RBP0.19□□□□□ -2.38
RBM39-242ENST00000498280 FRAS1Q86XX4 4008 aa0.19□□□□□ -2.38
RBM39-242ENST00000498280 NAV2Q8IVL1 2488 aa0.19□□□□□ -2.38
RBM39-242ENST00000498280 BCORL1Q5H9F3 1711 aa0.18□□□□□ -2.38
RBM39-242ENST00000498280 HMCN2Q8NDA2 5059 aa0.18□□□□□ -2.38
RBM39-242ENST00000498280 MEGF8Q7Z7M0 2845 aa0.18□□□□□ -2.38
RBM39-242ENST00000498280 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.18□□□□□ -2.38
RBM39-242ENST00000498280 TRBV7-6A0A0J9YX20 115 aa0.18□□□□□ -2.38
RBM39-242ENST00000498280 NBDYA0A0U1RRE5 68 aa0.18□□□□□ -2.38
RBM39-242ENST00000498280 A0A1B0GV72 72 aa0.18□□□□□ -2.38
RBM39-242ENST00000498280 LOC101927531A0A1B0GV80 90 aa0.18□□□□□ -2.38
RBM39-242ENST00000498280 PRORSD1PA6NEY8 169 aa0.18□□□□□ -2.38
RBM39-242ENST00000498280 CDC42EP2O14613 210 aa0.18□□□□□ -2.38
RBM39-242ENST00000498280 EDF1O60869 148 aaKnown RBP0.18□□□□□ -2.38
RBM39-242ENST00000498280 FAM107AO95990 144 aa0.18□□□□□ -2.38
RBM39-242ENST00000498280 S100A5P33763 92 aa0.18□□□□□ -2.38
RBM39-242ENST00000498280 GTF2A1P52655 376 aaPredicted RBP0.18□□□□□ -2.38
RBM39-242ENST00000498280 DNAJB13P59910 316 aa0.18□□□□□ -2.38
RBM39-242ENST00000498280 BLCAPP62952 87 aa0.18□□□□□ -2.38
RBM39-242ENST00000498280 FXYD3Q14802 87 aa0.18□□□□□ -2.38
RBM39-242ENST00000498280 ZNF56Q15929 161 aa0.18□□□□□ -2.38
RBM39-242ENST00000498280 TSKUQ8WUA8 353 aa0.18□□□□□ -2.38
RBM39-242ENST00000498280 BRK1Q8WUW1 75 aa0.18□□□□□ -2.38
RBM39-242ENST00000498280 MRPL36Q9P0J6 103 aaKnown RBP0.18□□□□□ -2.38
RBM39-242ENST00000498280 SMPXQ9UHP9 88 aa0.18□□□□□ -2.38
RBM39-242ENST00000498280 V9GYQ6 96 aa0.18□□□□□ -2.38
RBM39-242ENST00000498280 SPTBN4Q9H254 2564 aa0.18□□□□□ -2.38
RBM39-242ENST00000498280 HERC1Q15751 4861 aa0.18□□□□□ -2.38
RBM39-242ENST00000498280 ANK1P16157 1881 aa0.18□□□□□ -2.38
RBM39-242ENST00000498280 PBRM1Q86U86 1689 aa0.18□□□□□ -2.38
RBM39-242ENST00000498280 COL6A5A8TX70 2615 aa0.17□□□□□ -2.38
RBM39-242ENST00000498280 TANC2Q9HCD6 1990 aa0.17□□□□□ -2.38
RBM39-242ENST00000498280 KNTC1P50748 2209 aa0.17□□□□□ -2.38
RBM39-242ENST00000498280 NCOR2Q9Y618 2525 aa0.17□□□□□ -2.38
RBM39-242ENST00000498280 TMEM30CPA0ZSE6 113 aa0.17□□□□□ -2.38
RBM39-242ENST00000498280 ANKRD17O75179 2603 aaKnown RBP0.17□□□□□ -2.38
RBM39-242ENST00000498280 IFNA21P01568 189 aa0.17□□□□□ -2.38
RBM39-242ENST00000498280 IGKCP01834 107 aa0.17□□□□□ -2.38
RBM39-242ENST00000498280 IL7P13232 177 aa0.17□□□□□ -2.38
RBM39-242ENST00000498280 EVI2AP22794 236 aa0.17□□□□□ -2.38
RBM39-242ENST00000498280 SRP9P49458 86 aaKnown RBP0.17□□□□□ -2.38
RBM39-242ENST00000498280 TMEM128Q5BJH2 165 aa0.17□□□□□ -2.38
RBM39-242ENST00000498280 C10orf99Q6UWK7 81 aa0.17□□□□□ -2.38
RBM39-242ENST00000498280 C5orf56Q8N8D9 126 aa0.17□□□□□ -2.38
RBM39-242ENST00000498280 TEP1Q99973 2627 aaKnown RBP0.17□□□□□ -2.38
RBM39-242ENST00000498280 MRPL35Q9NZE8 188 aaKnown RBP0.17□□□□□ -2.38
RBM39-242ENST00000498280 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.17□□□□□ -2.38
RBM39-242ENST00000498280 BDP1A6H8Y1 2624 aa0.17□□□□□ -2.38
RBM39-242ENST00000498280 MAST4O15021 2626 aa0.17□□□□□ -2.38
RBM39-242ENST00000498280 A2MP01023 1474 aa0.16□□□□□ -2.38
RBM39-242ENST00000498280 SONP18583 2426 aaKnown RBP0.16□□□□□ -2.38
RBM39-242ENST00000498280 VWFP04275 2813 aa0.16□□□□□ -2.38
RBM39-242ENST00000498280 RYR3Q15413 4870 aa0.16□□□□□ -2.38
RBM39-242ENST00000498280 TMEM189A5PLL7 270 aa0.16□□□□□ -2.38
RBM39-242ENST00000498280 IFITM5A6NNB3 132 aa0.16□□□□□ -2.38
RBM39-242ENST00000498280 PGRMC1O00264 195 aaKnown RBP0.16□□□□□ -2.38
RBM39-242ENST00000498280 IGF2P01344 180 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms