RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 ZNF688P0C7X2 276 aa6.09□□□□□ -1.43
PDZRN3-212ENST00000498048 GZMBP10144 247 aa6.09□□□□□ -1.43
PDZRN3-212ENST00000498048 NDUFA6P56556 154 aa6.09□□□□□ -1.43
PDZRN3-212ENST00000498048 SNRPD3P62318 126 aaKnown RBP6.09□□□□□ -1.43
PDZRN3-212ENST00000498048 HBBP68871 147 aa6.09□□□□□ -1.43
PDZRN3-212ENST00000498048 FHL3Q13643 280 aa6.09□□□□□ -1.43
PDZRN3-212ENST00000498048 KLF5Q13887 457 aaPredicted RBP6.09□□□□□ -1.43
PDZRN3-212ENST00000498048 Q6AWC8 147 aa6.09□□□□□ -1.43
PDZRN3-212ENST00000498048 RASL11AQ6T310 242 aa6.09□□□□□ -1.43
PDZRN3-212ENST00000498048 RBPMS2Q6ZRY4 209 aaKnown RBP6.09□□□□□ -1.43
PDZRN3-212ENST00000498048 WFDC3Q8IUB2 231 aa6.09□□□□□ -1.43
PDZRN3-212ENST00000498048 BORCS7Q96B45 105 aa6.09□□□□□ -1.43
PDZRN3-212ENST00000498048 RAX2Q96IS3 184 aa6.09□□□□□ -1.43
PDZRN3-212ENST00000498048 PGLYRP4Q96LB8 373 aa6.09□□□□□ -1.43
PDZRN3-212ENST00000498048 CITED2Q99967 270 aaPredicted RBP6.09□□□□□ -1.43
PDZRN3-212ENST00000498048 AGPAT4-IT1Q9H0P7 198 aa6.09□□□□□ -1.43
PDZRN3-212ENST00000498048 RNF114Q9Y508 228 aa6.09□□□□□ -1.43
PDZRN3-212ENST00000498048 LENEPQ9Y5L5 61 aa6.09□□□□□ -1.43
PDZRN3-212ENST00000498048 FN1P02751 2386 aaKnown RBP6.08□□□□□ -1.44
PDZRN3-212ENST00000498048 SETXQ7Z333 2677 aaKnown RBP6.08□□□□□ -1.44
PDZRN3-212ENST00000498048 TMSB15BA0A087X1C1 80 aa6.08□□□□□ -1.44
PDZRN3-212ENST00000498048 FAM231BA6NCW3 169 aa6.08□□□□□ -1.44
PDZRN3-212ENST00000498048 K7EQG2 157 aa6.08□□□□□ -1.44
PDZRN3-212ENST00000498048 UBE2CO00762 179 aa6.08□□□□□ -1.44
PDZRN3-212ENST00000498048 ZNF705DP0CH99 300 aaPredicted RBP6.08□□□□□ -1.44
PDZRN3-212ENST00000498048 ZNF705BP0CI00 300 aaPredicted RBP6.08□□□□□ -1.44
PDZRN3-212ENST00000498048 CRIP1P50238 77 aa6.08□□□□□ -1.44
PDZRN3-212ENST00000498048 ZNF80P51504 273 aaPredicted RBP6.08□□□□□ -1.44
PDZRN3-212ENST00000498048 DEFB1P60022 68 aa6.08□□□□□ -1.44
PDZRN3-212ENST00000498048 RPS20P60866 119 aaKnown RBP6.08□□□□□ -1.44
PDZRN3-212ENST00000498048 SNRPEP62304 92 aaKnown RBP6.08□□□□□ -1.44
PDZRN3-212ENST00000498048 PSMG4Q5JS54 123 aa6.08□□□□□ -1.44
PDZRN3-212ENST00000498048 TMEM136Q6ZRR5 245 aa6.08□□□□□ -1.44
PDZRN3-212ENST00000498048 OR8A1Q8NGG7 326 aa6.08□□□□□ -1.44
PDZRN3-212ENST00000498048 GTSF1Q8WW33 167 aa6.08□□□□□ -1.44
PDZRN3-212ENST00000498048 TPPP3Q9BW30 176 aa6.08□□□□□ -1.44
PDZRN3-212ENST00000498048 GNB1LQ9BYB4 327 aa6.08□□□□□ -1.44
PDZRN3-212ENST00000498048 CUBNO60494 3623 aa6.07□□□□□ -1.44
PDZRN3-212ENST00000498048 A0A1B0GXF2 115 aa6.07□□□□□ -1.44
PDZRN3-212ENST00000498048 C5orf52A6NGY3 159 aa6.07□□□□□ -1.44
PDZRN3-212ENST00000498048 F6UB75 175 aa6.07□□□□□ -1.44
PDZRN3-212ENST00000498048 J3KRW8 73 aa6.07□□□□□ -1.44
PDZRN3-212ENST00000498048 CCL24O00175 119 aa6.07□□□□□ -1.44
PDZRN3-212ENST00000498048 CTRLP40313 264 aa6.07□□□□□ -1.44
PDZRN3-212ENST00000498048 AKR1D1P51857 326 aa6.07□□□□□ -1.44
PDZRN3-212ENST00000498048 PROK1P58294 105 aa6.07□□□□□ -1.44
PDZRN3-212ENST00000498048 PAFAH1B2P68402 229 aa6.07□□□□□ -1.44
PDZRN3-212ENST00000498048 SRSF2Q01130 221 aaKnown RBP6.07□□□□□ -1.44
PDZRN3-212ENST00000498048 PRR9Q5T870 116 aa6.07□□□□□ -1.44
PDZRN3-212ENST00000498048 DLX4Q92988 240 aaPredicted RBP6.07□□□□□ -1.44
PDZRN3-212ENST00000498048 LINC00477Q96M19 166 aa6.07□□□□□ -1.44
PDZRN3-212ENST00000498048 PPP1R14DQ9NXH3 145 aa6.07□□□□□ -1.44
PDZRN3-212ENST00000498048 NOTCH2Q04721 2471 aa6.07□□□□□ -1.44
PDZRN3-212ENST00000498048 F8P00451 2351 aa6.07□□□□□ -1.44
PDZRN3-212ENST00000498048 TRAV2A0A0B4J234 112 aa6.06□□□□□ -1.44
PDZRN3-212ENST00000498048 A0A1B0GUT8 65 aa6.06□□□□□ -1.44
PDZRN3-212ENST00000498048 FABP5P3A8MUU1 101 aa6.06□□□□□ -1.44
PDZRN3-212ENST00000498048 EIF4EBP3O60516 100 aaPredicted RBP6.06□□□□□ -1.44
PDZRN3-212ENST00000498048 CRLF1O75462 422 aa6.06□□□□□ -1.44
PDZRN3-212ENST00000498048 ORM1P02763 201 aa6.06□□□□□ -1.44
PDZRN3-212ENST00000498048 S100A8P05109 93 aa6.06□□□□□ -1.44
PDZRN3-212ENST00000498048 CSN3P07498 182 aa6.06□□□□□ -1.44
PDZRN3-212ENST00000498048 ARMS2P0C7Q2 107 aa6.06□□□□□ -1.44
PDZRN3-212ENST00000498048 FRMD6-AS1P0C7T7 363 aa6.06□□□□□ -1.44
PDZRN3-212ENST00000498048 CAMPP49913 170 aa6.06□□□□□ -1.44
PDZRN3-212ENST00000498048 RIGQ13278 110 aa6.06□□□□□ -1.44
PDZRN3-212ENST00000498048 NSUN5P1Q3KNT7 163 aa6.06□□□□□ -1.44
PDZRN3-212ENST00000498048 ADAMTSL5Q6ZMM2 481 aa6.06□□□□□ -1.44
PDZRN3-212ENST00000498048 TMEM61Q8N0U2 210 aa6.06□□□□□ -1.44
PDZRN3-212ENST00000498048 FER1L6-AS1Q8NA97 138 aa6.06□□□□□ -1.44
PDZRN3-212ENST00000498048 NAGKQ9UJ70 344 aa6.06□□□□□ -1.44
PDZRN3-212ENST00000498048 SORL1Q92673 2214 aa6.06□□□□□ -1.44
PDZRN3-212ENST00000498048 C2CD3Q4AC94 2353 aa6.05□□□□□ -1.44
PDZRN3-212ENST00000498048 TRAV21A0A0B4J279 112 aa6.05□□□□□ -1.44
PDZRN3-212ENST00000498048 TRBV7-9A0A0J9YWB2 115 aa6.05□□□□□ -1.44
PDZRN3-212ENST00000498048 A0A1B0GW15 77 aa6.05□□□□□ -1.44
PDZRN3-212ENST00000498048 GRIFINA4D1Z8 144 aa6.05□□□□□ -1.44
PDZRN3-212ENST00000498048 APCSP02743 223 aa6.05□□□□□ -1.44
PDZRN3-212ENST00000498048 LEPP41159 167 aa6.05□□□□□ -1.44
PDZRN3-212ENST00000498048 SLAQ13239 276 aa6.05□□□□□ -1.44
PDZRN3-212ENST00000498048 PDZD11Q5EBL8 140 aa6.05□□□□□ -1.44
PDZRN3-212ENST00000498048 GDF5OSQ5U4N7 250 aa6.05□□□□□ -1.44
PDZRN3-212ENST00000498048 EBLN2Q6P2I7 272 aa6.05□□□□□ -1.44
PDZRN3-212ENST00000498048 ZFAND2AQ8N6M9 145 aa6.05□□□□□ -1.44
PDZRN3-212ENST00000498048 ODF3Q96PU9 254 aa6.05□□□□□ -1.44
PDZRN3-212ENST00000498048 SSBP4Q9BWG4 385 aaPredicted RBP6.05□□□□□ -1.44
PDZRN3-212ENST00000498048 HIVEP1P15822 2718 aa6.05□□□□□ -1.44
PDZRN3-212ENST00000498048 MUC4Q99102 2169 aa6.04□□□□□ -1.44
PDZRN3-212ENST00000498048 NACAE9PAV3 2078 aa6.04□□□□□ -1.44
PDZRN3-212ENST00000498048 A0A0J9YX75 114 aa6.04□□□□□ -1.44
PDZRN3-212ENST00000498048 OR4C46A6NHA9 309 aa6.04□□□□□ -1.44
PDZRN3-212ENST00000498048 DUSP14O95147 198 aaKnown RBP6.04□□□□□ -1.44
PDZRN3-212ENST00000498048 GPX1P07203 203 aa6.04□□□□□ -1.44
PDZRN3-212ENST00000498048 IGLC6P0CF74 106 aa6.04□□□□□ -1.44
PDZRN3-212ENST00000498048 CRISP2P16562 243 aa6.04□□□□□ -1.44
PDZRN3-212ENST00000498048 HOXA5P20719 270 aa6.04□□□□□ -1.44
PDZRN3-212ENST00000498048 S100A2P29034 98 aa6.04□□□□□ -1.44
PDZRN3-212ENST00000498048 SRIP30626 198 aa6.04□□□□□ -1.44
PDZRN3-212ENST00000498048 KIAA1644Q3SXP7 199 aa6.04□□□□□ -1.44
PDZRN3-212ENST00000498048 LYZL1Q6UWQ5 148 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms