RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 PGPA6NDG6 321 aa7.6□□□□□ -1.19
SHROOM3-210ENST00000497440 MBP02144 154 aa7.6□□□□□ -1.19
SHROOM3-210ENST00000497440 HTN1P15515 57 aa7.6□□□□□ -1.19
SHROOM3-210ENST00000497440 HOXA5P20719 270 aa7.6□□□□□ -1.19
SHROOM3-210ENST00000497440 RNASE4P34096 147 aaKnown RBP7.6□□□□□ -1.19
SHROOM3-210ENST00000497440 RPL7L1Q6DKI1 246 aaKnown RBP7.6□□□□□ -1.19
SHROOM3-210ENST00000497440 ST6GAL2Q96JF0 529 aa7.6□□□□□ -1.19
SHROOM3-210ENST00000497440 GSN-AS1Q9NRJ2 163 aa7.6□□□□□ -1.19
SHROOM3-210ENST00000497440 KLF12Q9Y4X4 402 aa7.6□□□□□ -1.19
SHROOM3-210ENST00000497440 A0A1B0GVY2 172 aa7.59□□□□□ -1.19
SHROOM3-210ENST00000497440 A0A1W2PPV4 95 aa7.59□□□□□ -1.19
SHROOM3-210ENST00000497440 SNURFLB1AK76 121 aa7.59□□□□□ -1.19
SHROOM3-210ENST00000497440 RTL8CO15255 209 aa7.59□□□□□ -1.19
SHROOM3-210ENST00000497440 CSN1S1P47710 185 aa7.59□□□□□ -1.19
SHROOM3-210ENST00000497440 CDC34P49427 236 aaPredicted RBP7.59□□□□□ -1.19
SHROOM3-210ENST00000497440 ZNF726P1Q15940 193 aa7.59□□□□□ -1.19
SHROOM3-210ENST00000497440 Q6ZTI0 123 aa7.59□□□□□ -1.19
SHROOM3-210ENST00000497440 HSD17B11Q8NBQ5 300 aa7.59□□□□□ -1.19
SHROOM3-210ENST00000497440 INO80EQ8NBZ0 244 aaPredicted RBP7.59□□□□□ -1.19
SHROOM3-210ENST00000497440 Q8TAT8 98 aa7.59□□□□□ -1.19
SHROOM3-210ENST00000497440 GNPNAT1Q96EK6 184 aaPredicted RBP7.59□□□□□ -1.19
SHROOM3-210ENST00000497440 SH3BGRL3Q9H299 93 aa7.59□□□□□ -1.19
SHROOM3-210ENST00000497440 HSPG2P98160 4391 aa7.59□□□□□ -1.19
SHROOM3-210ENST00000497440 APOBP04114 4563 aaKnown RBP7.59□□□□□ -1.2
SHROOM3-210ENST00000497440 SERTM2A0A1B0GWG4 89 aa7.58□□□□□ -1.2
SHROOM3-210ENST00000497440 F5H768 121 aa7.58□□□□□ -1.2
SHROOM3-210ENST00000497440 J3KRW8 73 aa7.58□□□□□ -1.2
SHROOM3-210ENST00000497440 TAAR5O14804 337 aa7.58□□□□□ -1.2
SHROOM3-210ENST00000497440 IGLV2-11P01706 119 aa7.58□□□□□ -1.2
SHROOM3-210ENST00000497440 ARL14EPLP0DKL9 152 aa7.58□□□□□ -1.2
SHROOM3-210ENST00000497440 HTN3P15516 51 aa7.58□□□□□ -1.2
SHROOM3-210ENST00000497440 GCHFRP30047 84 aa7.58□□□□□ -1.2
SHROOM3-210ENST00000497440 LINC00336Q6ZUF6 198 aa7.58□□□□□ -1.2
SHROOM3-210ENST00000497440 SSX7Q7RTT5 188 aa7.58□□□□□ -1.2
SHROOM3-210ENST00000497440 ZNRF2Q8NHG8 242 aa7.58□□□□□ -1.2
SHROOM3-210ENST00000497440 VSIG2Q96IQ7 327 aa7.58□□□□□ -1.2
SHROOM3-210ENST00000497440 GAGE12BA1L429 117 aa7.57□□□□□ -1.2
SHROOM3-210ENST00000497440 HMSDA8MTL9 139 aa7.57□□□□□ -1.2
SHROOM3-210ENST00000497440 GAGE7O76087 117 aa7.57□□□□□ -1.2
SHROOM3-210ENST00000497440 GAGE12FP0CL80 117 aa7.57□□□□□ -1.2
SHROOM3-210ENST00000497440 GAGE12GP0CL81 117 aa7.57□□□□□ -1.2
SHROOM3-210ENST00000497440 GAGE12IP0CL82 117 aa7.57□□□□□ -1.2
SHROOM3-210ENST00000497440 IQCF2Q8IXL9 164 aa7.57□□□□□ -1.2
SHROOM3-210ENST00000497440 RASL10AQ92737 203 aa7.57□□□□□ -1.2
SHROOM3-210ENST00000497440 TMEM167BQ9NRX6 74 aa7.57□□□□□ -1.2
SHROOM3-210ENST00000497440 BOLA1Q9Y3E2 137 aa7.57□□□□□ -1.2
SHROOM3-210ENST00000497440 A0A1W2PRE2 83 aa7.56□□□□□ -1.2
SHROOM3-210ENST00000497440 GGTLC3B5MD39 225 aa7.56□□□□□ -1.2
SHROOM3-210ENST00000497440 HMGB3O15347 200 aaKnown RBP7.56□□□□□ -1.2
SHROOM3-210ENST00000497440 TCRAP04437 139 aa7.56□□□□□ -1.2
SHROOM3-210ENST00000497440 ZNF345Q14585 488 aa7.56□□□□□ -1.2
SHROOM3-210ENST00000497440 FAM74A1Q5RGS3 127 aa7.56□□□□□ -1.2
SHROOM3-210ENST00000497440 COX8CQ7Z4L0 72 aa7.56□□□□□ -1.2
SHROOM3-210ENST00000497440 C5orf17Q8NAS9 161 aa7.56□□□□□ -1.2
SHROOM3-210ENST00000497440 OR11H4Q8NGC9 324 aa7.56□□□□□ -1.2
SHROOM3-210ENST00000497440 UPK3BQ9BT76 320 aa7.56□□□□□ -1.2
SHROOM3-210ENST00000497440 ACTR3CQ9C0K3 210 aaPredicted RBP7.56□□□□□ -1.2
SHROOM3-210ENST00000497440 MDFICQ9P1T7 246 aa7.56□□□□□ -1.2
SHROOM3-210ENST00000497440 EPDR1Q9UM22 224 aa7.56□□□□□ -1.2
SHROOM3-210ENST00000497440 LINC00588Q9Y4M8 146 aa7.56□□□□□ -1.2
SHROOM3-210ENST00000497440 TRAV26-1A0A087WT03 109 aa7.55□□□□□ -1.2
SHROOM3-210ENST00000497440 FXYD6-FXYD2A0A087WZ82 144 aa7.55□□□□□ -1.2
SHROOM3-210ENST00000497440 TRAV8-1A0A0A6YYK1 113 aa7.55□□□□□ -1.2
SHROOM3-210ENST00000497440 CTXND1A0A1B0GTU2 59 aa7.55□□□□□ -1.2
SHROOM3-210ENST00000497440 FBLL1A6NHQ2 334 aaKnown RBP7.55□□□□□ -1.2
SHROOM3-210ENST00000497440 CXorf1O96002 111 aa7.55□□□□□ -1.2
SHROOM3-210ENST00000497440 GOLT1AQ6ZVE7 132 aa7.55□□□□□ -1.2
SHROOM3-210ENST00000497440 KCNRGQ8N5I3 272 aa7.55□□□□□ -1.2
SHROOM3-210ENST00000497440 CMTM2Q8TAZ6 248 aa7.55□□□□□ -1.2
SHROOM3-210ENST00000497440 HYLS1Q96M11 299 aa7.55□□□□□ -1.2
SHROOM3-210ENST00000497440 TMPRSS5Q9H3S3 457 aa7.55□□□□□ -1.2
SHROOM3-210ENST00000497440 A0A096LPF7 62 aa7.54□□□□□ -1.2
SHROOM3-210ENST00000497440 BORCS7-ASMTA0A0B4J1R7 106 aa7.54□□□□□ -1.2
SHROOM3-210ENST00000497440 RGS13O14921 159 aa7.54□□□□□ -1.2
SHROOM3-210ENST00000497440 SUMO1P63165 101 aaKnown RBP7.54□□□□□ -1.2
SHROOM3-210ENST00000497440 FHL2Q14192 279 aa7.54□□□□□ -1.2
SHROOM3-210ENST00000497440 ESRGQ1W209 222 aa7.54□□□□□ -1.2
SHROOM3-210ENST00000497440 SPXQ9BT56 116 aa7.54□□□□□ -1.2
SHROOM3-210ENST00000497440 C11orf21Q9P2W6 132 aa7.54□□□□□ -1.2
SHROOM3-210ENST00000497440 TRGV1A0A0A0MS02 117 aa7.53□□□□□ -1.2
SHROOM3-210ENST00000497440 TRAV21A0A0B4J279 112 aa7.53□□□□□ -1.2
SHROOM3-210ENST00000497440 IGHV3-16A0A0C4DH30 117 aa7.53□□□□□ -1.2
SHROOM3-210ENST00000497440 ARPC5O15511 151 aa7.53□□□□□ -1.2
SHROOM3-210ENST00000497440 ZNF80P51504 273 aaPredicted RBP7.53□□□□□ -1.2
SHROOM3-210ENST00000497440 CCL18P55774 89 aa7.53□□□□□ -1.2
SHROOM3-210ENST00000497440 GNG5P63218 68 aa7.53□□□□□ -1.2
SHROOM3-210ENST00000497440 SLAQ13239 276 aa7.53□□□□□ -1.2
SHROOM3-210ENST00000497440 OR5I1Q13606 314 aa7.53□□□□□ -1.2
SHROOM3-210ENST00000497440 ZNF575Q86XF7 245 aa7.53□□□□□ -1.2
SHROOM3-210ENST00000497440 TMEM75Q8N9X5 138 aa7.53□□□□□ -1.2
SHROOM3-210ENST00000497440 PTH2Q96A98 100 aa7.53□□□□□ -1.2
SHROOM3-210ENST00000497440 TREM1Q9NP99 234 aa7.53□□□□□ -1.2
SHROOM3-210ENST00000497440 TRGV11A0A075B6L2 103 aa7.52□□□□□ -1.21
SHROOM3-210ENST00000497440 NBDYA0A0U1RRE5 68 aa7.52□□□□□ -1.21
SHROOM3-210ENST00000497440 FAM74A7A6NL05 159 aa7.52□□□□□ -1.21
SHROOM3-210ENST00000497440 GNRH2O43555 120 aa7.52□□□□□ -1.21
SHROOM3-210ENST00000497440 NUDT3O95989 172 aa7.52□□□□□ -1.21
SHROOM3-210ENST00000497440 SEC11BP0C7V7 166 aa7.52□□□□□ -1.21
SHROOM3-210ENST00000497440 CRYBA4P53673 196 aa7.52□□□□□ -1.21
SHROOM3-210ENST00000497440 ZNF415Q09FC8 603 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms