RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 GYPBP06028 91 aa1.86□□□□□ -2.11
VPS36-206ENST00000497149 MSMBP08118 114 aa1.86□□□□□ -2.11
VPS36-206ENST00000497149 ASIPP42127 132 aa1.86□□□□□ -2.11
VPS36-206ENST00000497149 FXYD2P54710 66 aa1.86□□□□□ -2.11
VPS36-206ENST00000497149 RPL26P61254 145 aaKnown RBP1.86□□□□□ -2.11
VPS36-206ENST00000497149 DYNLT1P63172 113 aa1.86□□□□□ -2.11
VPS36-206ENST00000497149 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.86□□□□□ -2.11
VPS36-206ENST00000497149 ZNF720Q7Z2F6 126 aa1.86□□□□□ -2.11
VPS36-206ENST00000497149 CLDND2Q8NHS1 167 aa1.86□□□□□ -2.11
VPS36-206ENST00000497149 OTOSQ8NHW6 89 aa1.86□□□□□ -2.11
VPS36-206ENST00000497149 HYLS1Q96M11 299 aa1.86□□□□□ -2.11
VPS36-206ENST00000497149 C16orf95Q9H693 158 aa1.86□□□□□ -2.11
VPS36-206ENST00000497149 RABAC1Q9UI14 185 aa1.86□□□□□ -2.11
VPS36-206ENST00000497149 LSM2Q9Y333 95 aaKnown RBP1.86□□□□□ -2.11
VPS36-206ENST00000497149 TIMM9Q9Y5J7 89 aa1.86□□□□□ -2.11
VPS36-206ENST00000497149 LY96Q9Y6Y9 160 aa1.86□□□□□ -2.11
VPS36-206ENST00000497149 NCAPD3P42695 1498 aa1.86□□□□□ -2.11
VPS36-206ENST00000497149 ECM29Q5VYK3 1845 aa1.86□□□□□ -2.11
VPS36-206ENST00000497149 REREQ9P2R6 1566 aa1.85□□□□□ -2.11
VPS36-206ENST00000497149 CACNA1GO43497 2377 aa1.85□□□□□ -2.11
VPS36-206ENST00000497149 SIPA1L1O43166 1804 aa1.85□□□□□ -2.11
VPS36-206ENST00000497149 KIF13AQ9H1H9 1805 aa1.85□□□□□ -2.11
VPS36-206ENST00000497149 PROSCO94903 275 aa1.85□□□□□ -2.11
VPS36-206ENST00000497149 COX6A1P12074 109 aa1.85□□□□□ -2.11
VPS36-206ENST00000497149 CCL4P13236 92 aa1.85□□□□□ -2.11
VPS36-206ENST00000497149 CCL5P13501 91 aa1.85□□□□□ -2.11
VPS36-206ENST00000497149 PEBP1P30086 187 aaKnown RBP1.85□□□□□ -2.11
VPS36-206ENST00000497149 SNCAP37840 140 aa1.85□□□□□ -2.11
VPS36-206ENST00000497149 NPC2P61916 151 aa1.85□□□□□ -2.11
VPS36-206ENST00000497149 DEFB103AP81534 67 aa1.85□□□□□ -2.11
VPS36-206ENST00000497149 KISS1Q15726 138 aa1.85□□□□□ -2.11
VPS36-206ENST00000497149 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
VPS36-206ENST00000497149 FAM229BQ4G0N7 80 aa1.85□□□□□ -2.11
VPS36-206ENST00000497149 C12orf73Q69YU5 71 aa1.85□□□□□ -2.11
VPS36-206ENST00000497149 SOSTDC1Q6X4U4 206 aa1.85□□□□□ -2.11
VPS36-206ENST00000497149 Q6ZS92 163 aa1.85□□□□□ -2.11
VPS36-206ENST00000497149 C3orf56Q8N813 242 aa1.85□□□□□ -2.11
VPS36-206ENST00000497149 ATP6V0E2Q8NHE4 81 aa1.85□□□□□ -2.11
VPS36-206ENST00000497149 PFN4Q8NHR9 129 aa1.85□□□□□ -2.11
VPS36-206ENST00000497149 TSKUQ8WUA8 353 aa1.85□□□□□ -2.11
VPS36-206ENST00000497149 S100ZQ8WXG8 99 aa1.85□□□□□ -2.11
VPS36-206ENST00000497149 FGF13Q92913 245 aa1.85□□□□□ -2.11
VPS36-206ENST00000497149 TTTY13Q9BZ97 58 aa1.85□□□□□ -2.11
VPS36-206ENST00000497149 TMEM242Q9NWH2 141 aa1.85□□□□□ -2.11
VPS36-206ENST00000497149 CFTRP13569 1480 aa1.85□□□□□ -2.11
VPS36-206ENST00000497149 MYO9BQ13459 2157 aa1.85□□□□□ -2.11
VPS36-206ENST00000497149 HELZP42694 1942 aaKnown RBP1.84□□□□□ -2.11
VPS36-206ENST00000497149 CEP164Q9UPV0 1460 aa1.84□□□□□ -2.11
VPS36-206ENST00000497149 IGHV3-15A0A0B4J1V0 119 aa1.84□□□□□ -2.11
VPS36-206ENST00000497149 IGHV1-24A0A0C4DH33 117 aa1.84□□□□□ -2.11
VPS36-206ENST00000497149 TMEM235A6NFC5 223 aa1.84□□□□□ -2.11
VPS36-206ENST00000497149 ZNF705FA8MVS1 300 aaPredicted RBP1.84□□□□□ -2.11
VPS36-206ENST00000497149 OOSP1A8MZH6 123 aa1.84□□□□□ -2.11
VPS36-206ENST00000497149 C17orf112F2Z3M2 114 aa1.84□□□□□ -2.11
VPS36-206ENST00000497149 H3BPC8 53 aa1.84□□□□□ -2.11
VPS36-206ENST00000497149 M0R129 80 aa1.84□□□□□ -2.11
VPS36-206ENST00000497149 PDCD5O14737 125 aa1.84□□□□□ -2.11
VPS36-206ENST00000497149 TIMM17BO60830 172 aa1.84□□□□□ -2.11
VPS36-206ENST00000497149 EDF1O60869 148 aaKnown RBP1.84□□□□□ -2.11
VPS36-206ENST00000497149 NDUFB6O95139 128 aa1.84□□□□□ -2.11
VPS36-206ENST00000497149 APOC3P02656 99 aa1.84□□□□□ -2.11
VPS36-206ENST00000497149 CD3DP04234 171 aa1.84□□□□□ -2.11
VPS36-206ENST00000497149 PIPP12273 146 aaPredicted RBP1.84□□□□□ -2.11
VPS36-206ENST00000497149 XCL1P47992 114 aa1.84□□□□□ -2.11
VPS36-206ENST00000497149 POLR2JP52435 117 aaKnown RBP1.84□□□□□ -2.11
VPS36-206ENST00000497149 KRTAP12-1P59990 96 aa1.84□□□□□ -2.11
VPS36-206ENST00000497149 Q8N2B8 174 aa1.84□□□□□ -2.11
VPS36-206ENST00000497149 C10orf82Q8WW14 230 aa1.84□□□□□ -2.11
VPS36-206ENST00000497149 SPTSSAQ969W0 71 aa1.84□□□□□ -2.11
VPS36-206ENST00000497149 MRPS24Q96EL2 167 aaKnown RBP1.84□□□□□ -2.11
VPS36-206ENST00000497149 IMMP2LQ96T52 175 aa1.84□□□□□ -2.11
VPS36-206ENST00000497149 UPK3BQ9BT76 320 aa1.84□□□□□ -2.11
VPS36-206ENST00000497149 NPVFQ9HCQ7 196 aa1.84□□□□□ -2.11
VPS36-206ENST00000497149 SMCO4Q9NRQ5 59 aa1.84□□□□□ -2.11
VPS36-206ENST00000497149 SLIT2O94813 1529 aa1.84□□□□□ -2.11
VPS36-206ENST00000497149 DLC1Q96QB1 1528 aa1.84□□□□□ -2.11
VPS36-206ENST00000497149 KDM5DQ9BY66 1539 aa1.84□□□□□ -2.11
VPS36-206ENST00000497149 MED1Q15648 1581 aaPredicted RBP1.84□□□□□ -2.12
VPS36-206ENST00000497149 PLXNA3P51805 1871 aa1.84□□□□□ -2.12
VPS36-206ENST00000497149 MYO5AQ9Y4I1 1855 aaKnown RBP1.84□□□□□ -2.12
VPS36-206ENST00000497149 MYH1P12882 1939 aa1.83□□□□□ -2.12
VPS36-206ENST00000497149 UACAQ9BZF9 1416 aa1.83□□□□□ -2.12
VPS36-206ENST00000497149 CCDC141Q6ZP82 1450 aa1.83□□□□□ -2.12
VPS36-206ENST00000497149 NUP98P52948 1817 aa1.83□□□□□ -2.12
VPS36-206ENST00000497149 MUC21A0A0G2JKD1 596 aa1.83□□□□□ -2.12
VPS36-206ENST00000497149 PITX3O75364 302 aa1.83□□□□□ -2.12
VPS36-206ENST00000497149 CYB5AP00167 134 aa1.83□□□□□ -2.12
VPS36-206ENST00000497149 SHBGP04278 402 aa1.83□□□□□ -2.12
VPS36-206ENST00000497149 IL5P05113 134 aa1.83□□□□□ -2.12
VPS36-206ENST00000497149 COX7CP15954 63 aa1.83□□□□□ -2.12
VPS36-206ENST00000497149 RPL28P46779 137 aaKnown RBP1.83□□□□□ -2.12
VPS36-206ENST00000497149 ZNF117Q03924 483 aa1.83□□□□□ -2.12
VPS36-206ENST00000497149 Q0VG73 95 aa1.83□□□□□ -2.12
VPS36-206ENST00000497149 SS18Q15532 418 aa1.83□□□□□ -2.12
VPS36-206ENST00000497149 MIC13Q5XKP0 118 aa1.83□□□□□ -2.12
VPS36-206ENST00000497149 PATE2Q6UY27 113 aa1.83□□□□□ -2.12
VPS36-206ENST00000497149 DYNAPQ8N1N2 210 aa1.83□□□□□ -2.12
VPS36-206ENST00000497149 C15orf53Q8NAA6 179 aa1.83□□□□□ -2.12
VPS36-206ENST00000497149 Q96M85 177 aa1.83□□□□□ -2.12
VPS36-206ENST00000497149 DPH3P1Q9H4G8 78 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms