RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 OR10J6PQ8NGY7 276 aa10.08□□□□□ -0.8
VEGFA-215ENST00000497139 SPRY4Q9C004 299 aa10.08□□□□□ -0.8
VEGFA-215ENST00000497139 FRYLO94915 3013 aa10.08□□□□□ -0.8
VEGFA-215ENST00000497139 SLC25A20O43772 301 aa10.08□□□□□ -0.8
VEGFA-215ENST00000497139 ZNF474Q6S9Z5 364 aaPredicted RBP10.08□□□□□ -0.8
VEGFA-215ENST00000497139 TOMM6Q96B49 74 aa10.08□□□□□ -0.8
VEGFA-215ENST00000497139 KIR2DL4Q99706 377 aa10.08□□□□□ -0.8
VEGFA-215ENST00000497139 DMDP11532 3685 aa10.08□□□□□ -0.8
VEGFA-215ENST00000497139 IGKV2-40A0A087WW87 121 aaPredicted RBP10.07□□□□□ -0.8
VEGFA-215ENST00000497139 IGKV2D-40P01614 121 aaPredicted RBP10.07□□□□□ -0.8
VEGFA-215ENST00000497139 HLA-DMBP28068 263 aa10.07□□□□□ -0.8
VEGFA-215ENST00000497139 TRAV8-2A0A0B4J237 113 aa10.07□□□□□ -0.8
VEGFA-215ENST00000497139 H3BVH4 76 aa10.07□□□□□ -0.8
VEGFA-215ENST00000497139 IGHG3P01860 377 aa10.07□□□□□ -0.8
VEGFA-215ENST00000497139 GATA1P15976 413 aaPredicted RBP10.07□□□□□ -0.8
VEGFA-215ENST00000497139 CCL3L1P16619 93 aa10.07□□□□□ -0.8
VEGFA-215ENST00000497139 RPL7P18124 248 aaKnown RBP10.07□□□□□ -0.8
VEGFA-215ENST00000497139 TMEM200BQ69YZ2 307 aa10.07□□□□□ -0.8
VEGFA-215ENST00000497139 C1orf210Q8IVY1 113 aa10.07□□□□□ -0.8
VEGFA-215ENST00000497139 ENSAO43768 121 aaKnown RBP10.06□□□□□ -0.8
VEGFA-215ENST00000497139 MDFICQ9P1T7 246 aa10.06□□□□□ -0.8
VEGFA-215ENST00000497139 TRAV4A0A0B4J268 109 aa10.06□□□□□ -0.8
VEGFA-215ENST00000497139 K7EIM0 57 aa10.06□□□□□ -0.8
VEGFA-215ENST00000497139 IGHV1-46P01743 117 aa10.06□□□□□ -0.8
VEGFA-215ENST00000497139 RPL13AP40429 203 aaKnown RBP10.06□□□□□ -0.8
VEGFA-215ENST00000497139 PAPPA-AS1Q5QFB9 102 aa10.06□□□□□ -0.8
VEGFA-215ENST00000497139 SCGB3A1Q96QR1 104 aa10.06□□□□□ -0.8
VEGFA-215ENST00000497139 SMIM2Q9BVW6 85 aa10.06□□□□□ -0.8
VEGFA-215ENST00000497139 IGHV4-4A0A075B6R2 117 aa10.05□□□□□ -0.8
VEGFA-215ENST00000497139 LINC01548A6NM66 108 aa10.05□□□□□ -0.8
VEGFA-215ENST00000497139 CD59P13987 128 aa10.05□□□□□ -0.8
VEGFA-215ENST00000497139 EFNA4P52798 201 aa10.05□□□□□ -0.8
VEGFA-215ENST00000497139 PRO1854Q9UHT4 67 aa10.05□□□□□ -0.8
VEGFA-215ENST00000497139 P0DMU3 169 aa10.05□□□□□ -0.8
VEGFA-215ENST00000497139 FAM231AP0DMU4 169 aa10.05□□□□□ -0.8
VEGFA-215ENST00000497139 FAM231CP0DMU5 169 aa10.05□□□□□ -0.8
VEGFA-215ENST00000497139 HERVK_113P61574 105 aa10.05□□□□□ -0.8
VEGFA-215ENST00000497139 ERCC8Q13216 396 aa10.05□□□□□ -0.8
VEGFA-215ENST00000497139 RBAKDNA6NC62 111 aa10.04□□□□□ -0.8
VEGFA-215ENST00000497139 BRI3O95415 125 aa10.04□□□□□ -0.8
VEGFA-215ENST00000497139 ZNF883P0CG24 379 aa10.04□□□□□ -0.8
VEGFA-215ENST00000497139 RNF5Q99942 180 aa10.04□□□□□ -0.8
VEGFA-215ENST00000497139 SLC50A1Q9BRV3 221 aa10.04□□□□□ -0.8
VEGFA-215ENST00000497139 A0A0J9YY99 117 aa10.04□□□□□ -0.8
VEGFA-215ENST00000497139 CFC1BP0CG36 223 aa10.04□□□□□ -0.8
VEGFA-215ENST00000497139 CFC1P0CG37 223 aa10.04□□□□□ -0.8
VEGFA-215ENST00000497139 PLEKHB2Q96CS7 222 aa10.04□□□□□ -0.8
VEGFA-215ENST00000497139 SPANXDQ9BXN6 97 aa10.04□□□□□ -0.8
VEGFA-215ENST00000497139 HIF1ANQ9NWT6 349 aa10.04□□□□□ -0.8
VEGFA-215ENST00000497139 APELAP0DMC3 54 aa10.03□□□□□ -0.8
VEGFA-215ENST00000497139 FAM159AQ6UWV7 190 aa10.03□□□□□ -0.8
VEGFA-215ENST00000497139 C9orf106Q8NAJ2 232 aa10.03□□□□□ -0.8
VEGFA-215ENST00000497139 VKORC1Q9BQB6 163 aa10.03□□□□□ -0.8
VEGFA-215ENST00000497139 ONECUT1Q9UBC0 465 aa10.03□□□□□ -0.8
VEGFA-215ENST00000497139 IGHV3-30P01768 117 aa10.03□□□□□ -0.8
VEGFA-215ENST00000497139 IGHV3-30-5P0DP03 117 aa10.03□□□□□ -0.8
VEGFA-215ENST00000497139 Q8TAT8 98 aa10.03□□□□□ -0.8
VEGFA-215ENST00000497139 M0R1B8 84 aa10.02□□□□□ -0.81
VEGFA-215ENST00000497139 PRTN3P24158 256 aa10.02□□□□□ -0.81
VEGFA-215ENST00000497139 DLX6P56179 175 aa10.02□□□□□ -0.81
VEGFA-215ENST00000497139 GPR179Q6PRD1 2367 aa10.02□□□□□ -0.81
VEGFA-215ENST00000497139 SFTA2Q6UW10 78 aa10.02□□□□□ -0.81
VEGFA-215ENST00000497139 YAE1D1Q9NRH1 226 aa10.02□□□□□ -0.81
VEGFA-215ENST00000497139 TRAV8-4A0A0B4J246 113 aa10.02□□□□□ -0.81
VEGFA-215ENST00000497139 C9JAW5 83 aa10.02□□□□□ -0.81
VEGFA-215ENST00000497139 LY6DQ14210 128 aa10.02□□□□□ -0.81
VEGFA-215ENST00000497139 ASCL5Q7RTU5 278 aa10.02□□□□□ -0.81
VEGFA-215ENST00000497139 SLC25A29Q8N8R3 303 aa10.02□□□□□ -0.81
VEGFA-215ENST00000497139 BAALCQ8WXS3 180 aa10.02□□□□□ -0.81
VEGFA-215ENST00000497139 CRLF1O75462 422 aa10.01□□□□□ -0.81
VEGFA-215ENST00000497139 MEIG1Q5JSS6 88 aa10.01□□□□□ -0.81
VEGFA-215ENST00000497139 Q8N1Y9 231 aa10.01□□□□□ -0.81
VEGFA-215ENST00000497139 RASL10AQ92737 203 aa10.01□□□□□ -0.81
VEGFA-215ENST00000497139 TIMD4Q96H15 378 aa10.01□□□□□ -0.81
VEGFA-215ENST00000497139 CFAP54Q96N23 3096 aa10.01□□□□□ -0.81
VEGFA-215ENST00000497139 FAM186AA6NE01 2351 aa10.01□□□□□ -0.81
VEGFA-215ENST00000497139 TRGV3P03979 118 aa10.01□□□□□ -0.81
VEGFA-215ENST00000497139 CNTFRP26992 372 aa10.01□□□□□ -0.81
VEGFA-215ENST00000497139 ODF3Q96PU9 254 aa10.01□□□□□ -0.81
VEGFA-215ENST00000497139 NDUFB3O43676 98 aa10□□□□□ -0.81
VEGFA-215ENST00000497139 FAM240AA0A1B0GVK7 77 aa10□□□□□ -0.81
VEGFA-215ENST00000497139 IGHV1-8P0DP01 117 aa10□□□□□ -0.81
VEGFA-215ENST00000497139 ATXN8Q156A1 80 aa10□□□□□ -0.81
VEGFA-215ENST00000497139 TMEM155Q4W5P6 130 aa10□□□□□ -0.81
VEGFA-215ENST00000497139 TMEM105Q8N8V8 129 aa10□□□□□ -0.81
VEGFA-215ENST00000497139 VPREB3Q9UKI3 123 aa10□□□□□ -0.81
VEGFA-215ENST00000497139 CACNA1GO43497 2377 aa10□□□□□ -0.81
VEGFA-215ENST00000497139 IGHV3-72A0A0B4J1Y9 119 aa9.99□□□□□ -0.81
VEGFA-215ENST00000497139 A0A0B4J2C4 111 aa9.99□□□□□ -0.81
VEGFA-215ENST00000497139 SCGB2A1O75556 95 aa9.99□□□□□ -0.81
VEGFA-215ENST00000497139 LPAL2Q16609 132 aa9.99□□□□□ -0.81
VEGFA-215ENST00000497139 ANXA2RQ3ZCQ2 193 aa9.99□□□□□ -0.81
VEGFA-215ENST00000497139 C15orf53Q8NAA6 179 aa9.99□□□□□ -0.81
VEGFA-215ENST00000497139 MFAP4P55083 255 aa9.99□□□□□ -0.81
VEGFA-215ENST00000497139 IGFBPL1Q8WX77 278 aa9.99□□□□□ -0.81
VEGFA-215ENST00000497139 CFHR4Q92496 578 aa9.99□□□□□ -0.81
VEGFA-215ENST00000497139 IGKV3D-20A0A0C4DH25 116 aa9.98□□□□□ -0.81
VEGFA-215ENST00000497139 IGHV7-4-1A0A0J9YVY3 117 aa9.98□□□□□ -0.81
VEGFA-215ENST00000497139 PRB4P10163 310 aaPredicted RBP9.98□□□□□ -0.81
VEGFA-215ENST00000497139 SUMO2P61956 95 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms